myRT

myRT report for GCA_001307215.1_ASM130721v1

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Seq: CP012803.1 Escherichia coli O157:H7 strain WS4202 plasmid pO157-WS4202, complete sequence (92739 bp)
Overview 1 RT 1: 32847-39296 bp Neighborhood of RT #1 [32847, 39296] PRK13705 PRK13698 RVT_N RVT-GII YkfC HNHc DUF1281 DUF1281_C Feature: gene Location: 32847-34013 bp Ori: ALH93989.1 Feature: domain Description: PRK13705 Location: 32850-34011 bp Feature: domain Description: PRK1 3705 Location: 32850-3401 1 bp Feature: gene Location: 34013-34984 bp Ori: ALH93990.1 Feature: domain Description: PRK13698 Location: 34016-34979 bp Feature: domain Description: PRK1 3698 Location: 3401 6-34979 bp Feature: gene Location: 36284-38008 bp Ori: ALH93991.1 Feature: domain Description: RVT_N Location: 36341-36578 bp Feature: domain Description: RVT_N Location: 36341 -36578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36629-37277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36629-37277 bp Feature: domain Description: YkfC Location: 37409-37565 bp Feature: domain Description: YkfC Location: 37409-37565 bp Feature: domain Description: HNHc Note: nucleases Location: 37793-37952 bp Feature: domain Description: HNHc Note: nucleases Location: 37793-37952 bp Feature: gene Location: 38085-38987 bp Ori: ALH93992.1 Feature: domain Description: DUF1281 Location: 38154-38682 bp Feature: domain Description: DUF1 281 Location: 381 54-38682 bp Feature: domain Description: DUF1281_C Location: 38688-38916 bp Feature: domain Description: DUF1 281 _C Location: 38688-3891 6 bp Feature: gene Location: 38991-39296 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13705 (plasmid-partitioning protein SopA; Provisional), PRK13698 (ParB/RepB/Spo0J family plasmid partition protein), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), DUF1281 (pfam06924), DUF1281_C (pfam18406)