myRT

myRT report for GCA_001308105.1_ASM130810v1

Download annotations/find similar RTs

Seq: CP012863.1 (357561 bp)
Overview 1 RT 1: 211509-215743 bp Neighborhood of RT #1 [211509, 215778] KOG2566 RVT-GII GIIM couple_hipB Feature: gene Location: 211509-212969 bp Feature: domain Description: KOG2566 Location: 211620-212967 bp Feature: domain Description: KOG2566 Location: 21 1 620-21 2967 bp Feature: gene Location: 213289-213732 bp Feature: gene Location: 213936-214676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 213939-214575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 3939-21 4575 bp Feature: gene Location: 214719-214946 bp Feature: domain Description: GIIM Note: maturase Location: 214725-214866 bp Feature: domain Description: GIIM Note: maturase Location: 21 4725-21 4866 bp Feature: gene Location: 215569-215778 bp Feature: domain Description: couple_hipB Location: 215584-215743 bp Feature: domain Description: couple_hipB Location: 21 5584-21 5743 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG2566 (KOG2566, Beta-glucocerebrosidase ), RVT-GII, GIIM (pfam08388), couple_hipB (TIGR03070)

Seq: CP012852.1 (1575724 bp)
Overview 1 RT 1: 108973-113080 bp 2 RT 2: 409621-415154 bp 3 RT 3: 531741-540003 bp 4 RT 4: 833437-835689 bp 5 RT 5: 843252-846556 bp 6 RT 6: 1050213-1053591 bp 7 RT 7: 1270860-1275737 bp 8 RT 8: 1452768-1456193 bp Neighborhood of RT #1 [108973, 113088] group_II_RT_mat RVT-GII YtcJ YtcJ Neighborhood of RT #2 [409621, 415168] CreD GIIM RVT-GII MFS_MdfA_MDR_like Neighborhood of RT #3 [531741, 540104] DnaE DnaE RVT-GII GIIM G6S_like Neighborhood of RT #4 [833437, 835689] TnpB_IS66 GIIM RVT-GII Neighborhood of RT #5 [843252, 846556] RVT-GII GIIM Neighborhood of RT #6 [1050213, 1053591] RVT-GII GIIM group_II_RT_mat Neighborhood of RT #7 [1270860, 1275737] PRK09441 RVT-GII GIIM Neighborhood of RT #8 [1452768, 1456846] group_II_RT_mat RVT-GII RVT-GII PAS_like Feature: gene Location: 108973-109143 bp Feature: gene Location: 109518-109925 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 109677-109911 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 109677-109911 bp Feature: gene Location: 110006-110590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110027-110507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11002 7-110507 bp Feature: gene Location: 110742-110879 bp Feature: gene Location: 111454-113088 bp Feature: domain Description: YtcJ Location: 111553-112453 bp Feature: domain Description: YtcJ Location: 111553-112 453 bp Feature: domain Description: YtcJ Location: 112765-113080 bp Feature: domain Description: YtcJ Location: 112 765-113080 bp Feature: gene Location: 409621-410997 bp Feature: domain Description: CreD Location: 409723-410974 bp Feature: domain Description: CreD Location: 40972 3-410974 bp Feature: gene Location: 411335-411619 bp Feature: domain Description: GIIM Note: maturase Location: 411344-411539 bp Feature: domain Description: GIIM Note: maturase Location: 411344-411539 bp Feature: gene Location: 411621-412343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 411624-412260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41162 4-412 2 60 bp Feature: gene Location: 412548-412832 bp Feature: gene Location: 413975-415168 bp Feature: domain Description: MFS_MdfA_MDR_like Location: 414023-415154 bp Feature: domain Description: MFS_MdfA_MDR_like Location: 41402 3-415154 bp Feature: gene Location: 531741-532982 bp Feature: gene Location: 533180-536116 bp Feature: domain Description: DnaE Location: 533189-533468 bp Feature: domain Description: DnaE Location: 533189-533468 bp Feature: domain Description: DnaE Location: 533609-535979 bp Feature: domain Description: DnaE Location: 533609-535979 bp Feature: gene Location: 536593-537990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 536932-537550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 536932 -537550 bp Feature: domain Description: GIIM Note: maturase Location: 537604-537832 bp Feature: domain Description: GIIM Note: maturase Location: 537604-537832 bp Feature: gene Location: 538147-538281 bp Feature: gene Location: 538455-540104 bp Feature: domain Description: G6S_like Location: 538545-540003 bp Feature: domain Description: G6S_like Location: 538545-540003 bp Feature: gene Location: 833437-833727 bp Feature: domain Description: TnpB_IS66 Location: 833440-833701 bp Feature: domain Description: TnpB_IS66 Location: 833440-833701 bp Feature: gene Location: 833769-834314 bp Feature: domain Description: GIIM Note: maturase Location: 833820-834012 bp Feature: domain Description: GIIM Note: maturase Location: 83382 0-834012 bp Feature: gene Location: 834445-834984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 834448-834967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 834448-834967 bp Feature: gene Location: 835055-835336 bp Feature: gene Location: 835522-835689 bp Feature: gene Location: 843252-844346 bp Feature: gene Location: 844249-844401 bp Feature: gene Location: 844896-845903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 844899-845535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 844899-845535 bp Feature: domain Description: GIIM Note: maturase Location: 845619-845823 bp Feature: domain Description: GIIM Note: maturase Location: 845619-84582 3 bp Feature: gene Location: 846107-846391 bp Feature: gene Location: 846404-846556 bp Feature: gene Location: 1050213-1050428 bp Feature: gene Location: 1050385-1051374 bp Feature: gene Location: 1051680-1052741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1051689-1052346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1051689-1052 346 bp Feature: domain Description: GIIM Note: maturase Location: 1052433-1052646 bp Feature: domain Description: GIIM Note: maturase Location: 1052 433-1052 646 bp Feature: gene Location: 1052777-1052944 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1052822-1052939 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1052 82 2 -1052 939 bp Feature: gene Location: 1053373-1053591 bp Feature: gene Location: 1270860-1272290 bp Feature: domain Description: PRK09441 Location: 1271067-1272282 bp Feature: domain Description: PRK09441 Location: 12 71067-12 72 2 82 bp Feature: gene Location: 1272760-1272912 bp Feature: gene Location: 1273304-1274662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1273628-1274294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 7362 8-12 742 94 bp Feature: domain Description: GIIM Note: maturase Location: 1274375-1274582 bp Feature: domain Description: GIIM Note: maturase Location: 12 74375-12 74582 bp Feature: gene Location: 1274900-1275076 bp Feature: gene Location: 1275159-1275737 bp Feature: gene Location: 1452768-1452965 bp Feature: gene Location: 1452980-1453177 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1453007-1453163 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1453007-1453163 bp Feature: gene Location: 1453258-1453590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1453279-1453540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14532 79-1453540 bp Feature: gene Location: 1453520-1453930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1453562-1453760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1453562 -1453760 bp Feature: gene Location: 1453936-1454130 bp Feature: gene Location: 1454501-1456846 bp Feature: domain Description: PAS_like Location: 1454690-1456193 bp Feature: domain Description: PAS_like Location: 1454690-1456193 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, YtcJ (COG1574), CreD (pfam06123), GIIM (pfam08388), MFS_MdfA_MDR_like (cd17320), DnaE (COG0587), G6S_like (cd16031), TnpB_IS66 (pfam05717), PRK09441 (cytoplasmic alpha-amylase; Reviewed)
PAS_like (cd16025)

Seq: CP012851.1 (3776595 bp)
Overview 1 RT 1: 13959-18086 bp 2 RT 2: 97969-102245 bp 3 RT 3: 139648-143483 bp 4 RT 4: 483702-490560 bp 5 RT 5: 567109-569899 bp 6 RT 6: 674252-681282 bp 7 RT 7: 924710-928418 bp 8 RT 8: 1153109-1156380 bp 9 RT 9: 1236484-1242414 bp 10 RT 10: 1247073-1251275 bp 11 RT 11: 1437917-1442738 bp 12 RT 12: 1540180-1543280 bp 13 RT 13: 1639894-1641812 bp 14 RT 14: 1696340-1701274 bp 15 RT 15: 2018381-2023444 bp 16 RT 16: 2204724-2208549 bp 17 RT 17: 2248121-2252168 bp 18 RT 18: 2283352-2286277 bp 19 RT 19: 2391045-2394707 bp 20 RT 20: 2413037-2417397 bp 21 RT 21: 2610549-2612936 bp 22 RT 22: 2670753-2674776 bp 23 RT 23: 2701658-2708057 bp 24 RT 24: 2950540-2956472 bp 25 RT 25: 3154825-3157699 bp 26 RT 26: 3327142-3333085 bp 27 RT 27: 3461573-3468371 bp 28 RT 28: 3745439-3758793 bp Neighborhood of RT #1 [13959, 18094] DUF1275 RVT-GII GIIM LolE Neighborhood of RT #2 [97969, 102247] GATase1_PfpI_1 RVT-GII GIIM MoxR Neighborhood of RT #3 [139648, 143485] rplD rplC RVT-GII GIIM rpsJ Neighborhood of RT #4 [483702, 490562] RVT-GII GIIM secA Neighborhood of RT #5 [567109, 569899] group_II_RT_mat RVT-GII Neighborhood of RT #6 [674252, 681314] RVT-GII GIIM polC dnaE Neighborhood of RT #7 [924710, 928435] RVT-GII RVT-GII GIIM cysS Neighborhood of RT #8 [1153109, 1156397] RVT-GII Lactonase Neighborhood of RT #9 [1236484, 1242414] RVT-GII GIIM HYR HYR SprB SprB SprB SprB Malectin He_PIG Malectin Por_Secre_tail Neighborhood of RT #10 [1247073, 1251385] NeuD_NnaD RVT-GII RVT-GII COG3547 Neighborhood of RT #11 [1437917, 1442738] HEAT_2 HEAT_2 PpiB RVT-GII GIIM SRPBCC_10 Neighborhood of RT #12 [1540180, 1543369] RVT-GII GIIM OMP_b-brl_2 RimL Neighborhood of RT #13 [1639894, 1641812] RVT-GII Neighborhood of RT #14 [1696340, 1701279] RVT-GII GIIM YloA PRK02113 Neighborhood of RT #15 [2018381, 2023444] dCache_1 GAF_2 RVT-GII RVT-GII RVT-GII GIIM Neighborhood of RT #16 [2204724, 2208632] RVT-GII PRK10590 Neighborhood of RT #17 [2248121, 2252896] RVT-GII GIIM GdhA GdhA Glycos_transf_2 Neighborhood of RT #18 [2283352, 2286277] RVT-GII GIIM GldC Neighborhood of RT #19 [2391045, 2394707] RVT-GII RVT-GII GIIM DUF350 DUF350 DUF350 DUF350 Neighborhood of RT #20 [2413037, 2417397] RVT-GII RVT-GII RVT-GII GIIM Neighborhood of RT #21 [2610549, 2612936] TnpB_IS66 GIIM RVT-GII Neighborhood of RT #22 [2670753, 2674793] group_II_RT_mat RVT-GII MPP_YkuE_C Neighborhood of RT #23 [2701658, 2708263] Peptidase_S41_CPP PRK13776 RVT-GII GIIM GSCFA Neighborhood of RT #24 [2950540, 2956582] HAD_Pase PIG-L RVT-GII GIIM DUF3127 Neighborhood of RT #25 [3154825, 3157699] COG4099 GIIM RVT-GII Neighborhood of RT #26 [3327142, 3333954] PRK12458 FGase QEGLA RVT-GII GIIM RVT-GII ExoI_N Neighborhood of RT #27 [3461573, 3468371] PqqL PqqL RVT-GII GIIM Neighborhood of RT #28 [3745439, 3759119] queA ispD RVT-GII GIIM DUF2795 DUF1460 RVT-GII GIIM MFS_AmpG_like murQ BadF RVT-GII GIIM DUF349 DUF349 DUF349 Feature: gene Location: 13959-14117 bp Feature: gene Location: 14188-14895 bp Feature: domain Description: DUF1275 Location: 14239-14842 bp Feature: domain Description: DUF1275 Location: 1423 9-14842 bp Feature: gene Location: 15010-16407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15349-15967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153 49-15967 bp Feature: domain Description: GIIM Note: maturase Location: 16021-16249 bp Feature: domain Description: GIIM Note: maturase Location: 16021-16249 bp Feature: gene Location: 16564-16698 bp Feature: gene Location: 16874-18094 bp Feature: domain Description: LolE Location: 16877-18086 bp Feature: domain Description: LolE Location: 16877-18086 bp Feature: gene Location: 97969-98409 bp Feature: gene Location: 98747-99328 bp Feature: domain Description: GATase1_PfpI_1 Location: 98762-99305 bp Feature: domain Description: GATase1_PfpI_1 Location: 98762-993 05 bp Feature: gene Location: 99423-100820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99762-100380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99762-1003 80 bp Feature: domain Description: GIIM Note: maturase Location: 100434-100662 bp Feature: domain Description: GIIM Note: maturase Location: 10043 4-100662 bp Feature: gene Location: 100977-101111 bp Feature: gene Location: 101282-102247 bp Feature: domain Description: MoxR Location: 101324-102245 bp Feature: domain Description: MoxR Location: 1013 24-102245 bp Feature: gene Location: 139648-140274 bp Feature: domain Description: rplD Location: 139651-140266 bp Feature: domain Description: rplD Location: 13 9651-140266 bp Feature: gene Location: 140279-140899 bp Feature: domain Description: rplC Location: 140282-140894 bp Feature: domain Description: rplC Location: 140282-140894 bp Feature: gene Location: 141307-142704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 141646-142264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 141646-142264 bp Feature: domain Description: GIIM Note: maturase Location: 142318-142546 bp Feature: domain Description: GIIM Note: maturase Location: 1423 18-142546 bp Feature: gene Location: 142861-142995 bp Feature: gene Location: 143180-143485 bp Feature: domain Description: rpsJ Location: 143186-143483 bp Feature: domain Description: rpsJ Location: 143 186-143 483 bp Feature: gene Location: 483702-483854 bp Feature: gene Location: 484351-484638 bp Feature: gene Location: 485332-486729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 485671-486289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 485671-486289 bp Feature: domain Description: GIIM Note: maturase Location: 486343-486571 bp Feature: domain Description: GIIM Note: maturase Location: 4863 43 -486571 bp Feature: gene Location: 486886-487020 bp Feature: gene Location: 487203-490562 bp Feature: domain Description: secA Location: 487227-490560 bp Feature: domain Description: secA Location: 487227-490560 bp Feature: gene Location: 567109-567477 bp Feature: gene Location: 567750-568088 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 567762-567978 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 567762-567978 bp Feature: gene Location: 568135-568758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 568138-568726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56813 8-568726 bp Feature: gene Location: 568962-569246 bp Feature: gene Location: 569741-569899 bp Feature: gene Location: 674252-674389 bp Feature: gene Location: 674437-674586 bp Feature: gene Location: 674795-676153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 675119-675785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 675119-675785 bp Feature: domain Description: GIIM Note: maturase Location: 675869-676073 bp Feature: domain Description: GIIM Note: maturase Location: 675869-676073 bp Feature: gene Location: 676810-676944 bp Feature: gene Location: 676995-681314 bp Feature: domain Description: polC Location: 677001-677559 bp Feature: domain Description: polC Location: 677001-677559 bp Feature: domain Description: dnaE Location: 677763-681282 bp Feature: domain Description: dnaE Location: 677763 -681282 bp Feature: gene Location: 924710-924847 bp Feature: gene Location: 924917-925111 bp Feature: gene Location: 925253-926092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 925577-926087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 925577-926087 bp Feature: gene Location: 926064-926252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 926091-926235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 926091-92623 5 bp Feature: gene Location: 926367-926612 bp Feature: domain Description: GIIM Note: maturase Location: 926376-926532 bp Feature: domain Description: GIIM Note: maturase Location: 9263 76-92653 2 bp Feature: gene Location: 926939-928435 bp Feature: domain Description: cysS Location: 926951-928418 bp Feature: domain Description: cysS Location: 926951-928418 bp Feature: gene Location: 1153109-1153276 bp Feature: gene Location: 1153462-1153746 bp Feature: gene Location: 1153809-1154648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1153923-1154589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1153 923 -1154589 bp Feature: gene Location: 1154765-1154959 bp Feature: gene Location: 1155246-1156397 bp Feature: domain Description: Lactonase Location: 1155360-1156380 bp Feature: domain Description: Lactonase Location: 11553 60-11563 80 bp Feature: gene Location: 1236484-1236753 bp Feature: gene Location: 1236791-1236925 bp Feature: gene Location: 1237082-1238479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1237421-1238039 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123 7421-123 803 9 bp Feature: domain Description: GIIM Note: maturase Location: 1238093-1238321 bp Feature: domain Description: GIIM Note: maturase Location: 123 8093 -123 83 21 bp Feature: gene Location: 1238691-1242134 bp Feature: domain Description: HYR Location: 1238904-1239108 bp Feature: domain Description: HYR Location: 123 8904-123 9108 bp Feature: domain Description: HYR Location: 1239111-1239366 bp Feature: domain Description: HYR Location: 123 9111-123 93 66 bp Feature: domain Description: SprB Location: 1239627-1239711 bp Feature: domain Description: SprB Location: 123 9627-123 9711 bp Feature: domain Description: SprB Location: 1239867-1239960 bp Feature: domain Description: SprB Location: 123 9867-123 9960 bp Feature: domain Description: SprB Location: 1240116-1240203 bp Feature: domain Description: SprB Location: 1240116-1240203 bp Feature: domain Description: SprB Location: 1240401-1240470 bp Feature: domain Description: SprB Location: 1240401-1240470 bp Feature: domain Description: Malectin Location: 1240587-1241028 bp Feature: domain Description: Malectin Location: 1240587-1241028 bp Feature: domain Description: He_PIG Location: 1241175-1241280 bp Feature: domain Description: He_PIG Location: 1241175-1241280 bp Feature: domain Description: Malectin Location: 1241355-1241793 bp Feature: domain Description: Malectin Location: 12413 55-1241793 bp Feature: domain Description: Por_Secre_tail Location: 1241892-1242126 bp Feature: domain Description: Por_Secre_tail Location: 1241892-1242126 bp Feature: gene Location: 1242193-1242414 bp Feature: gene Location: 1247073-1247708 bp Feature: domain Description: NeuD_NnaD Location: 1247088-1247694 bp Feature: domain Description: NeuD_NnaD Location: 1247088-1247694 bp Feature: gene Location: 1248257-1248541 bp Feature: gene Location: 1248745-1249233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1248748-1249228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1248748-1249228 bp Feature: gene Location: 1249205-1249423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1249232-1249337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124923 2-12493 3 7 bp Feature: gene Location: 1249572-1249766 bp Feature: gene Location: 1250321-1251385 bp Feature: domain Description: COG3547 Location: 1250426-1251275 bp Feature: domain Description: COG3 547 Location: 1250426-1251275 bp Feature: gene Location: 1437917-1439761 bp Feature: domain Description: HEAT_2 Location: 1438049-1438301 bp Feature: domain Description: HEAT_2 Location: 143 8049-143 83 01 bp Feature: domain Description: HEAT_2 Location: 1438379-1438568 bp Feature: domain Description: HEAT_2 Location: 143 83 79-143 8568 bp Feature: domain Description: PpiB Location: 1439351-1439735 bp Feature: domain Description: PpiB Location: 143 93 51-143 973 5 bp Feature: gene Location: 1439895-1440236 bp Feature: gene Location: 1440386-1441744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1440710-1441376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1440710-14413 76 bp Feature: domain Description: GIIM Note: maturase Location: 1441457-1441664 bp Feature: domain Description: GIIM Note: maturase Location: 1441457-1441664 bp Feature: gene Location: 1442017-1442457 bp Feature: domain Description: SRPBCC_10 Location: 1442053-1442437 bp Feature: domain Description: SRPBCC_10 Location: 1442053 -144243 7 bp Feature: gene Location: 1442535-1442738 bp Feature: gene Location: 1540180-1540320 bp Feature: gene Location: 1540336-1540470 bp Feature: gene Location: 1540627-1542024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1540966-1541584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1540966-1541584 bp Feature: domain Description: GIIM Note: maturase Location: 1541638-1541866 bp Feature: domain Description: GIIM Note: maturase Location: 154163 8-1541866 bp Feature: gene Location: 1542129-1542782 bp Feature: domain Description: OMP_b-brl_2 Location: 1542261-1542609 bp Feature: domain Description: OMP_b-brl_2 Location: 1542261-1542609 bp Feature: gene Location: 1542812-1543369 bp Feature: domain Description: RimL Location: 1542842-1543280 bp Feature: domain Description: RimL Location: 1542842-1543 280 bp Feature: gene Location: 1639894-1640022 bp Feature: gene Location: 1640229-1640510 bp Feature: gene Location: 1640581-1641339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1640584-1641220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1640584-1641220 bp Feature: gene Location: 1641368-1641589 bp Feature: gene Location: 1641600-1641812 bp Feature: gene Location: 1696340-1696768 bp Feature: gene Location: 1696930-1697064 bp Feature: gene Location: 1697221-1698618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1697560-1698178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1697560-1698178 bp Feature: domain Description: GIIM Note: maturase Location: 1698232-1698460 bp Feature: domain Description: GIIM Note: maturase Location: 169823 2-1698460 bp Feature: gene Location: 1698944-1700509 bp Feature: domain Description: YloA Location: 1698956-1700486 bp Feature: domain Description: YloA Location: 1698956-1700486 bp Feature: gene Location: 1700521-1701279 bp Feature: domain Description: PRK02113 Location: 1700524-1701274 bp Feature: domain Description: PRK02113 Location: 1700524-1701274 bp Feature: gene Location: 2018381-2020252 bp Feature: domain Description: dCache_1 Location: 2018525-2019206 bp Feature: domain Description: dCache_1 Location: 2018525-2019206 bp Feature: domain Description: GAF_2 Location: 2019701-2020079 bp Feature: domain Description: GAF_2 Location: 2019701-2020079 bp Feature: gene Location: 2020322-2020471 bp Feature: gene Location: 2020933-2021346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2021188-2021302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2021188-20213 02 bp Feature: gene Location: 2021352-2021726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2021373-2021697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20213 73 -2021697 bp Feature: gene Location: 2021735-2022220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2021753-2021852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2021753 -2021852 bp Feature: domain Description: GIIM Note: maturase Location: 2021933-2022140 bp Feature: domain Description: GIIM Note: maturase Location: 202193 3 -2022140 bp Feature: gene Location: 2022562-2023107 bp Feature: gene Location: 2023154-2023444 bp Feature: gene Location: 2204724-2204861 bp Feature: gene Location: 2205075-2205203 bp Feature: gene Location: 2205482-2206381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2205596-2206262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2205596-2206262 bp Feature: gene Location: 2206497-2206634 bp Feature: gene Location: 2207289-2208632 bp Feature: domain Description: PRK10590 Location: 2207292-2208549 bp Feature: domain Description: PRK10590 Location: 2207292-2208549 bp Feature: gene Location: 2248121-2248327 bp Feature: gene Location: 2248510-2248644 bp Feature: gene Location: 2248801-2250198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2249140-2249758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2249140-2249758 bp Feature: domain Description: GIIM Note: maturase Location: 2249812-2250040 bp Feature: domain Description: GIIM Note: maturase Location: 2249812-2250040 bp Feature: gene Location: 2250298-2251557 bp Feature: domain Description: GdhA Location: 2250373-2250685 bp Feature: domain Description: GdhA Location: 22503 73 -2250685 bp Feature: domain Description: GdhA Location: 2250877-2251549 bp Feature: domain Description: GdhA Location: 2250877-2251549 bp Feature: gene Location: 2251628-2252896 bp Feature: domain Description: Glycos_transf_2 Location: 2251709-2252168 bp Feature: domain Description: Glycos_transf_2 Location: 2251709-2252168 bp Feature: gene Location: 2283352-2283483 bp Feature: gene Location: 2283499-2283633 bp Feature: gene Location: 2283790-2285187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2284129-2284747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2284129-2284747 bp Feature: domain Description: GIIM Note: maturase Location: 2284801-2285029 bp Feature: domain Description: GIIM Note: maturase Location: 2284801-2285029 bp Feature: gene Location: 2285461-2285811 bp Feature: domain Description: GldC Location: 2285467-2285782 bp Feature: domain Description: GldC Location: 2285467-2285782 bp Feature: gene Location: 2286092-2286277 bp Feature: gene Location: 2391045-2391212 bp Feature: gene Location: 2391214-2391474 bp Feature: gene Location: 2391862-2392248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2391874-2392243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 91874-23 92243 bp Feature: gene Location: 2392232-2392690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2392235-2392322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 9223 5-23 923 22 bp Feature: domain Description: GIIM Note: maturase Location: 2392403-2392610 bp Feature: domain Description: GIIM Note: maturase Location: 23 92403 -23 92610 bp Feature: gene Location: 2393066-2393920 bp Feature: domain Description: DUF350 Location: 2393111-2393276 bp Feature: domain Description: DUF3 50 Location: 23 93 111-23 93 276 bp Feature: domain Description: DUF350 Location: 2393327-2393495 bp Feature: domain Description: DUF3 50 Location: 23 93 3 27-23 93 495 bp Feature: domain Description: DUF350 Location: 2393540-2393693 bp Feature: domain Description: DUF3 50 Location: 23 93 540-23 93 693 bp Feature: domain Description: DUF350 Location: 2393750-2393918 bp Feature: domain Description: DUF3 50 Location: 23 93 750-23 93 918 bp Feature: gene Location: 2393952-2394707 bp Feature: gene Location: 2413037-2413264 bp Feature: gene Location: 2413372-2413500 bp Feature: gene Location: 2413580-2413870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2413697-2413859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2413 697-2413 859 bp Feature: gene Location: 2413985-2414194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2413994-2414144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2413 994-2414144 bp Feature: gene Location: 2414202-2414606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2414211-2414364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2414211-24143 64 bp Feature: domain Description: GIIM Note: maturase Location: 2414445-2414586 bp Feature: domain Description: GIIM Note: maturase Location: 2414445-2414586 bp Feature: gene Location: 2415114-2416451 bp Feature: gene Location: 2416963-2417397 bp Feature: gene Location: 2610549-2610839 bp Feature: domain Description: TnpB_IS66 Location: 2610552-2610813 bp Feature: domain Description: TnpB_IS66 Location: 2610552-2610813 bp Feature: gene Location: 2610881-2611426 bp Feature: domain Description: GIIM Note: maturase Location: 2610932-2611124 bp Feature: domain Description: GIIM Note: maturase Location: 261093 2-2611124 bp Feature: gene Location: 2611557-2612378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2611812-2612361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2611812-26123 61 bp Feature: gene Location: 2612299-2612583 bp Feature: gene Location: 2612769-2612936 bp Feature: gene Location: 2670753-2671193 bp Feature: gene Location: 2671520-2671858 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2671532-2671748 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 267153 2-2671748 bp Feature: gene Location: 2671830-2672390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2671851-2672331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2671851-26723 3 1 bp Feature: gene Location: 2672759-2673049 bp Feature: gene Location: 2673504-2674793 bp Feature: domain Description: MPP_YkuE_C Location: 2674053-2674776 bp Feature: domain Description: MPP_YkuE_C Location: 2674053 -2674776 bp Feature: gene Location: 2701658-2703289 bp Feature: domain Description: Peptidase_S41_CPP Location: 2701796-2702915 bp Feature: domain Description: Peptidase_S41_CPP Location: 2701796-2702915 bp Feature: gene Location: 2703426-2704412 bp Feature: domain Description: PRK13776 Location: 2703435-2704398 bp Feature: domain Description: PRK13 776 Location: 2703 43 5-27043 98 bp Feature: gene Location: 2705257-2706615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2705581-2706247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2705581-2706247 bp Feature: domain Description: GIIM Note: maturase Location: 2706328-2706535 bp Feature: domain Description: GIIM Note: maturase Location: 27063 28-270653 5 bp Feature: gene Location: 2706843-2707229 bp Feature: gene Location: 2707289-2708263 bp Feature: domain Description: GSCFA Location: 2707349-2708057 bp Feature: domain Description: GSCFA Location: 27073 49-2708057 bp Feature: gene Location: 2950540-2950956 bp Feature: domain Description: HAD_Pase Location: 2950549-2950747 bp Feature: domain Description: HAD_Pase Location: 2950549-2950747 bp Feature: gene Location: 2951696-2954230 bp Feature: domain Description: PIG-L Location: 2951879-2952263 bp Feature: domain Description: PIG-L Location: 2951879-2952263 bp Feature: gene Location: 2954343-2955740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2954682-2955300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2954682-29553 00 bp Feature: domain Description: GIIM Note: maturase Location: 2955354-2955582 bp Feature: domain Description: GIIM Note: maturase Location: 29553 54-2955582 bp Feature: gene Location: 2955897-2956031 bp Feature: gene Location: 2956205-2956582 bp Feature: domain Description: DUF3127 Location: 2956214-2956472 bp Feature: domain Description: DUF3 127 Location: 2956214-2956472 bp Feature: gene Location: 3154825-3155703 bp Feature: domain Description: COG4099 Location: 3154996-3155692 bp Feature: domain Description: COG4099 Location: 3 154996-3 155692 bp Feature: gene Location: 3156002-3156247 bp Feature: domain Description: GIIM Note: maturase Location: 3156017-3156167 bp Feature: domain Description: GIIM Note: maturase Location: 3 156017-3 156167 bp Feature: gene Location: 3156231-3157154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3156348-3157014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 1563 48-3 157014 bp Feature: gene Location: 3157214-3157498 bp Feature: gene Location: 3157529-3157699 bp Feature: gene Location: 3327142-3328188 bp Feature: domain Description: PRK12458 Location: 3327163-3328174 bp Feature: domain Description: PRK12458 Location: 3 3 27163 -3 3 28174 bp Feature: gene Location: 3328169-3330154 bp Feature: domain Description: FGase Location: 3328277-3328817 bp Feature: domain Description: FGase Location: 3 3 28277-3 3 28817 bp Feature: domain Description: QEGLA Location: 3329054-3330134 bp Feature: domain Description: QEGLA Location: 3 3 29054-3 3 3 013 4 bp Feature: gene Location: 3330427-3330975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3330454-3330607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 3 0454-3 3 3 0607 bp Feature: domain Description: GIIM Note: maturase Location: 3330688-3330895 bp Feature: domain Description: GIIM Note: maturase Location: 3 3 3 0688-3 3 3 0895 bp Feature: gene Location: 3330947-3331297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3330968-3331292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 3 0968-3 3 3 1292 bp Feature: gene Location: 3331660-3331926 bp Feature: gene Location: 3332494-3333954 bp Feature: domain Description: ExoI_N Location: 3332542-3333085 bp Feature: domain Description: ExoI_N Location: 3 3 3 2542-3 3 3 3 085 bp Feature: gene Location: 3461573-3461755 bp Feature: gene Location: 3461825-3464797 bp Feature: domain Description: PqqL Location: 3461981-3463334 bp Feature: domain Description: PqqL Location: 3 461981-3 463 3 3 4 bp Feature: domain Description: PqqL Location: 3463640-3464711 bp Feature: domain Description: PqqL Location: 3 463 640-3 464711 bp Feature: gene Location: 3465182-3466579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3465521-3466139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 465521-3 46613 9 bp Feature: domain Description: GIIM Note: maturase Location: 3466193-3466421 bp Feature: domain Description: GIIM Note: maturase Location: 3 466193 -3 466421 bp Feature: gene Location: 3466736-3466870 bp Feature: gene Location: 3467046-3468371 bp Feature: gene Location: 3745439-3746491 bp Feature: domain Description: queA Location: 3745442-3746489 bp Feature: domain Description: queA Location: 3 745442-3 746489 bp Feature: gene Location: 3746557-3747234 bp Feature: domain Description: ispD Location: 3746563-3747226 bp Feature: domain Description: ispD Location: 3 746563 -3 747226 bp Feature: gene Location: 3747340-3748737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3747679-3748297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 747679-3 748297 bp Feature: domain Description: GIIM Note: maturase Location: 3748351-3748579 bp Feature: domain Description: GIIM Note: maturase Location: 3 7483 51-3 748579 bp Feature: gene Location: 3748894-3749028 bp Feature: gene Location: 3749196-3749417 bp Feature: domain Description: DUF2795 Location: 3749229-3749364 bp Feature: domain Description: DUF2795 Location: 3 749229-3 7493 64 bp Feature: gene Location: 3749576-3750463 bp Feature: domain Description: DUF1460 Location: 3749780-3750440 bp Feature: domain Description: DUF1460 Location: 3 749780-3 750440 bp Feature: gene Location: 3750727-3751692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3750733-3751324 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 75073 3 -3 7513 24 bp Feature: domain Description: GIIM Note: maturase Location: 3751405-3751612 bp Feature: domain Description: GIIM Note: maturase Location: 3 751405-3 751612 bp Feature: gene Location: 3751939-3752223 bp Feature: gene Location: 3752876-3754150 bp Feature: domain Description: MFS_AmpG_like Location: 3752921-3754109 bp Feature: domain Description: MFS_AmpG_like Location: 3 752921-3 754109 bp Feature: gene Location: 3754168-3754971 bp Feature: domain Description: murQ Location: 3754174-3754960 bp Feature: domain Description: murQ Location: 3 754174-3 754960 bp Feature: gene Location: 3754976-3755830 bp Feature: domain Description: BadF Location: 3754994-3755735 bp Feature: domain Description: BadF Location: 3 754994-3 75573 5 bp Feature: gene Location: 3756003-3757400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3756342-3756960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 7563 42-3 756960 bp Feature: domain Description: GIIM Note: maturase Location: 3757014-3757242 bp Feature: domain Description: GIIM Note: maturase Location: 3 757014-3 757242 bp Feature: gene Location: 3757557-3757691 bp Feature: gene Location: 3757866-3759119 bp Feature: domain Description: DUF349 Location: 3758178-3758331 bp Feature: domain Description: DUF3 49 Location: 3 758178-3 7583 3 1 bp Feature: domain Description: DUF349 Location: 3758349-3758559 bp Feature: domain Description: DUF3 49 Location: 3 7583 49-3 758559 bp Feature: domain Description: DUF349 Location: 3758577-3758793 bp Feature: domain Description: DUF3 49 Location: 3 758577-3 758793 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1275 (pfam06912), RVT-GII, GIIM (pfam08388), LolE (COG4591), GATase1_PfpI_1 (cd03169), MoxR (COG0714), rplD (PRK14907), rplC (PRK00001), rpsJ (PRK00596), secA (TIGR00963)
group_II_RT_mat (TIGR04416), polC (TIGR00354), dnaE (PRK07374), cysS (TIGR00435), Lactonase (pfam10282), HYR (pfam02494), SprB (pfam13573), Malectin (pfam11721), He_PIG (pfam05345), Por_Secre_tail (TIGR04183)
NeuD_NnaD (TIGR03570), COG3547 (Transposase ), HEAT_2 (pfam13646), PpiB (COG0652), SRPBCC_10 (cd08865), OMP_b-brl_2 (pfam13568), RimL (COG1670), YloA (COG1293), PRK02113 (MBL fold metallo-hydrolase), dCache_1 (pfam02743)
GAF_2 (pfam13185), PRK10590 (ATP-dependent RNA helicase RhlE; Provisional), GdhA (COG0334), Glycos_transf_2 (pfam00535), GldC (TIGR03515), DUF350 (pfam03994), TnpB_IS66 (pfam05717), MPP_YkuE_C (cd07385), Peptidase_S41_CPP (cd07560), PRK13776 (formimidoylglutamase; Provisional)
GSCFA (pfam08885), HAD_Pase (cd16418), PIG-L (pfam02585), DUF3127 (pfam11325), COG4099 (Predicted peptidase ), PRK12458 (glutathione synthetase; Provisional), FGase (pfam05013), QEGLA (TIGR02421), ExoI_N (cd06138), PqqL (COG0612)
queA (TIGR00113), ispD (TIGR00453), DUF2795 (pfam11387), DUF1460 (pfam07313), MFS_AmpG_like (cd17486), murQ (PRK05441), BadF (COG2971), DUF349 (pfam03993)

Seq: CP012862.1 (395438 bp)
Overview 1 RT 1: 60378-67218 bp 2 RT 2: 107927-110319 bp 3 RT 3: 132606-135387 bp 4 RT 4: 194661-198881 bp Neighborhood of RT #1 [60378, 67232] OMP_RagA_SusC RVT-GII FadR Neighborhood of RT #2 [107927, 110319] RVT-GII Neighborhood of RT #3 [132606, 135387] RVT-GII Tra8 Neighborhood of RT #4 [194661, 198881] RVT-GII GIIM Phage_int_SAM_4 INT_IntI_C Feature: gene Location: 60378-63407 bp Feature: domain Description: OMP_RagA_SusC Location: 60462-63399 bp Feature: domain Description: OMP_RagA_SusC Location: 604 62-63399 bp Feature: gene Location: 63673-63855 bp Feature: gene Location: 64857-65342 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64878-65316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64 878-65316 bp Feature: gene Location: 65684-65968 bp Feature: gene Location: 66522-67232 bp Feature: domain Description: FadR Location: 66549-67218 bp Feature: domain Description: FadR Location: 6654 9-67218 bp Feature: gene Location: 107927-108118 bp Feature: gene Location: 108434-108628 bp Feature: gene Location: 108746-109726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109001-109667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109001-109667 bp Feature: gene Location: 109647-109928 bp Feature: gene Location: 109945-110319 bp Feature: gene Location: 132606-132734 bp Feature: gene Location: 132805-133089 bp Feature: gene Location: 133293-133907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 133296-133830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 133296-133830 bp Feature: gene Location: 133921-134889 bp Feature: domain Description: Tra8 Location: 133927-134854 bp Feature: domain Description: Tra8 Location: 133927-134 854 bp Feature: gene Location: 135166-135387 bp Feature: gene Location: 194661-195650 bp Feature: gene Location: 195909-196052 bp Feature: gene Location: 196275-197549 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 196470-197085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1964 70-197085 bp Feature: domain Description: GIIM Note: maturase Location: 197160-197370 bp Feature: domain Description: GIIM Note: maturase Location: 197160-197370 bp Feature: gene Location: 197736-198632 bp Feature: domain Description: Phage_int_SAM_4 Location: 197811-198033 bp Feature: domain Description: Phage_int_SAM_4 Location: 197811-198033 bp Feature: domain Description: INT_IntI_C Location: 198087-198573 bp Feature: domain Description: INT_IntI_C Location: 198087-198573 bp Feature: gene Location: 198657-198881 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OMP_RagA_SusC (TIGR04056), RVT-GII, FadR (COG2186), Tra8 (COG2826), GIIM (pfam08388), Phage_int_SAM_4 (pfam13495), INT_IntI_C (cd01193)

Seq: CP012866.1 (81255 bp)
Overview 1 RT 1: 16465-21607 bp 2 RT 2: 53556-55844 bp Neighborhood of RT #1 [16465, 23445] RVT-GII GIIM Peptidase_S41_IRBP SEC-C Neighborhood of RT #2 [53556, 55844] RVT-GII group_II_RT_mat Feature: gene Location: 16465-17145 bp Feature: gene Location: 17438-17797 bp Feature: gene Location: 18521-19774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18734-19391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18734-19391 bp Feature: domain Description: GIIM Note: maturase Location: 19478-19694 bp Feature: domain Description: GIIM Note: maturase Location: 19478-19694 bp Feature: gene Location: 19877-21442 bp Feature: domain Description: Peptidase_S41_IRBP Location: 20042-21305 bp Feature: domain Description: Peptidase_S41_IRBP Location: 20042-21305 bp Feature: gene Location: 21538-23445 bp Feature: domain Description: SEC-C Location: 21556-21607 bp Feature: domain Description: SEC-C Location: 215 5 6-21607 bp Feature: gene Location: 53556-53843 bp Feature: gene Location: 54043-54468 bp Feature: gene Location: 54661-55050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54670-55000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 4670-5 5 000 bp Feature: gene Location: 55071-55409 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 55083-55299 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 5 5 083-5 5 299 bp Feature: gene Location: 55695-55844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Peptidase_S41_IRBP (cd07563), SEC-C (pfam02810), group_II_RT_mat (TIGR04416)

Seq: CP012860.1 (858818 bp)
Overview 1 RT 1: 78888-83418 bp 2 RT 2: 134488-139615 bp 3 RT 3: 203444-209237 bp 4 RT 4: 569716-576762 bp 5 RT 5: 825809-831825 bp 6 RT 6: 852733-858445 bp Neighborhood of RT #1 [78888, 83501] RVT-GII GIIM Tra8 TauE Neighborhood of RT #2 [134488, 139615] phoR_proteo PAS PRK11107 PRK11107 RVT-GII GIIM Neighborhood of RT #3 [203444, 209239] Glyco_hydro_127 Cupin_2 GlxA RVT-GII RVT-GII COG4922 Neighborhood of RT #4 [569716, 576770] MviM RVT-GII GIIM Por_Secre_tail Neighborhood of RT #5 [825809, 831842] YwqK SHR3_chaperone SHR3_chaperone RVT-GII GIIM PRK09426 Neighborhood of RT #6 [852733, 858445] META RVT-GII GIIM RVT-GII Feature: gene Location: 78888-79100 bp Feature: gene Location: 79648-79782 bp Feature: gene Location: 79939-81336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80278-80896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80278-80896 bp Feature: domain Description: GIIM Note: maturase Location: 80950-81178 bp Feature: domain Description: GIIM Note: maturase Location: 80950-81178 bp Feature: gene Location: 81549-82517 bp Feature: domain Description: Tra8 Location: 81555-82473 bp Feature: domain Description: Tra8 Location: 81555-82473 bp Feature: gene Location: 82641-83501 bp Feature: domain Description: TauE Location: 82665-83418 bp Feature: domain Description: TauE Location: 826 6 5-83418 bp Feature: gene Location: 134488-137169 bp Feature: domain Description: phoR_proteo Location: 134932-135349 bp Feature: domain Description: phoR_proteo Location: 134932-135349 bp Feature: domain Description: PAS Location: 135490-136018 bp Feature: domain Description: PAS Location: 135490-136 018 bp Feature: domain Description: PRK11107 Location: 136024-136753 bp Feature: domain Description: PRK11107 Location: 136 024-136 753 bp Feature: domain Description: PRK11107 Location: 136810-137155 bp Feature: domain Description: PRK11107 Location: 136 810-137155 bp Feature: gene Location: 137293-137430 bp Feature: gene Location: 137835-138779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138174-138711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138174-138711 bp Feature: gene Location: 138917-139201 bp Feature: domain Description: GIIM Note: maturase Location: 138926-139121 bp Feature: domain Description: GIIM Note: maturase Location: 138926 -139121 bp Feature: gene Location: 139391-139615 bp Feature: gene Location: 203444-205384 bp Feature: domain Description: Glyco_hydro_127 Location: 203741-205109 bp Feature: domain Description: Glyco_hydro_127 Location: 203741-205109 bp Feature: gene Location: 205519-206331 bp Feature: domain Description: Cupin_2 Location: 205576-205777 bp Feature: domain Description: Cupin_2 Location: 205576 -205777 bp Feature: domain Description: GlxA Location: 206014-206323 bp Feature: domain Description: GlxA Location: 206 014-206 323 bp Feature: gene Location: 207089-207910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207413-207860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207413-20786 0 bp Feature: gene Location: 207918-208115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207927-208080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207927-208080 bp Feature: gene Location: 208231-208452 bp Feature: gene Location: 208859-209239 bp Feature: domain Description: COG4922 Location: 208871-209237 bp Feature: domain Description: COG4922 Location: 208871-209237 bp Feature: gene Location: 569716-569955 bp Feature: gene Location: 570100-571080 bp Feature: domain Description: MviM Location: 570106-571066 bp Feature: domain Description: MviM Location: 570106 -57106 6 bp Feature: gene Location: 572354-573712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 572678-573344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5726 78-573344 bp Feature: domain Description: GIIM Note: maturase Location: 573428-573632 bp Feature: domain Description: GIIM Note: maturase Location: 573428-5736 32 bp Feature: gene Location: 574156-574428 bp Feature: gene Location: 575166-576770 bp Feature: domain Description: Por_Secre_tail Location: 576549-576762 bp Feature: domain Description: Por_Secre_tail Location: 576 549-576 76 2 bp Feature: gene Location: 825809-826717 bp Feature: domain Description: YwqK Location: 825902-826127 bp Feature: domain Description: YwqK Location: 825902-826 127 bp Feature: gene Location: 827015-827368 bp Feature: domain Description: SHR3_chaperone Location: 827045-827129 bp Feature: domain Description: SHR3_chaperone Location: 827045-827129 bp Feature: domain Description: SHR3_chaperone Location: 827219-827282 bp Feature: domain Description: SHR3_chaperone Location: 827219-827282 bp Feature: gene Location: 827805-829202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 828144-828762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 828144-82876 2 bp Feature: domain Description: GIIM Note: maturase Location: 828816-829044 bp Feature: domain Description: GIIM Note: maturase Location: 828816 -829044 bp Feature: gene Location: 829359-829493 bp Feature: gene Location: 829698-831842 bp Feature: domain Description: PRK09426 Location: 829740-831825 bp Feature: domain Description: PRK09426 Location: 829740-831825 bp Feature: gene Location: 852733-852957 bp Feature: gene Location: 853333-854463 bp Feature: domain Description: META Location: 854128-854446 bp Feature: domain Description: META Location: 854128-854446 bp Feature: gene Location: 854906-855652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 854915-855284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 854915-855284 bp Feature: domain Description: GIIM Note: maturase Location: 855368-855572 bp Feature: domain Description: GIIM Note: maturase Location: 85536 8-855572 bp Feature: gene Location: 855987-856268 bp Feature: gene Location: 856429-856605 bp Feature: gene Location: 856633-856992 bp Feature: gene Location: 857442-857957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 857445-857931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 857445-857931 bp Feature: gene Location: 858161-858445 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Tra8 (COG2826), TauE (pfam01925), phoR_proteo (TIGR02966), PAS (smart00091), PRK11107 (hybrid sensory histidine kinase BarA; Provisional), Glyco_hydro_127 (pfam07944), Cupin_2 (pfam07883), GlxA (COG4977)
COG4922 (Predicted SnoaL-like aldol condensation-catalyzing enzyme ), MviM (COG0673), Por_Secre_tail (TIGR04183), YwqK (COG2849), SHR3_chaperone (smart00786), PRK09426 (methylmalonyl-CoA mutase; Reviewed), META (pfam03724)

Seq: CP012861.1 (631941 bp)
Overview 1 RT 1: 469339-472001 bp 2 RT 2: 604875-609364 bp Neighborhood of RT #1 [469339, 472207] RVT-GII DDE_Tnp_1_2 Neighborhood of RT #2 [604875, 609510] RVT-GII GIIM DUF772 DDE_Tnp_1_2 Feature: gene Location: 469339-469476 bp Feature: gene Location: 469547-469675 bp Feature: gene Location: 469882-470931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 470206-470872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47 0206-47 087 2 bp Feature: gene Location: 471048-471242 bp Feature: gene Location: 471410-472207 bp Feature: domain Description: DDE_Tnp_1_2 Location: 471731-472001 bp Feature: domain Description: DDE_Tnp_1_2 Location: 47 17 31-47 2001 bp Feature: gene Location: 604875-605006 bp Feature: gene Location: 605112-605249 bp Feature: gene Location: 605503-606861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 605827-606493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 605827 -606493 bp Feature: domain Description: GIIM Note: maturase Location: 606574-606781 bp Feature: domain Description: GIIM Note: maturase Location: 60657 4-6067 81 bp Feature: gene Location: 607303-607695 bp Feature: gene Location: 607987-609510 bp Feature: domain Description: DUF772 Location: 608146-608341 bp Feature: domain Description: DUF7 7 2 Location: 608146-608341 bp Feature: domain Description: DDE_Tnp_1_2 Location: 609097-609364 bp Feature: domain Description: DDE_Tnp_1_2 Location: 609097 -609364 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_Tnp_1_2 (pfam13586), GIIM (pfam08388), DUF772 (pfam05598)