myRT

myRT report for GCA_001314265.1_ASM131426v1

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Seq: CP012889.1 Porphyromonas gingivalis 381, complete genome (2378872 bp)
Overview 1 RT 1: 2171253-2176680 bp Neighborhood of RT #1 [2171253, 2176928] Cas1_I-II-III DUF772 DDE_Tnp_1 CRISPR_Cas6 RVT-CRISPR Cas_Cas1 Cmr6_III-B cas_Cmr5 Feature: gene Location: 2171253-2172023 bp Ori: ALJ26313.1 Feature: domain Description: Cas1_I-II-III Location: 2171277-2171982 bp Feature: domain Description: Cas1 _I-II-III Location: 21 71 277-21 71 982 bp Feature: gene Location: 2172215-2173300 bp Ori: ALJ26314.1 Feature: domain Description: DUF772 Location: 2172392-2172611 bp Feature: domain Description: DUF772 Location: 21 72392-21 7261 1 bp Feature: domain Description: DDE_Tnp_1 Location: 2172644-2173259 bp Feature: domain Description: DDE_Tnp_1 Location: 21 72644-21 73259 bp Feature: gene Location: 2173404-2175692 bp Ori: ALJ26315.1 Feature: domain Description: CRISPR_Cas6 Location: 2173938-2174292 bp Feature: domain Description: CRISPR_Cas6 Location: 21 73938-21 74292 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2174442-2175054 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 21 74442-21 75054 bp Feature: domain Description: Cas_Cas1 Location: 2175504-2175690 bp Feature: domain Description: Cas_Cas1 Location: 21 75504-21 75690 bp Feature: gene Location: 2175748-2176494 bp Ori: ALJ26316.1 Feature: domain Description: Cmr6_III-B Location: 2175823-2176477 bp Feature: domain Description: Cmr6_III-B Location: 21 75823-21 76477 bp Feature: gene Location: 2176491-2176928 bp Ori: ALJ26317.1 Feature: domain Description: cas_Cmr5 Location: 2176530-2176680 bp Feature: domain Description: cas_Cmr5 Location: 21 76530-21 76680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas1_I-II-III (cl00656), DUF772 (pfam05598), DDE_Tnp_1 (pfam01609), CRISPR_Cas6 (pfam10040), RVT-CRISPR, Cas_Cas1 (pfam01867), Cmr6_III-B (cd09661), cas_Cmr5 (TIGR01881)