myRT

myRT report for GCA_001316565.3_ASM131656v3

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Seq: CP023488.1 Klebsiella pneumoniae subsp. pneumoniae strain ST101:960186733 plasmid p19-10_01, complete sequence (223434 bp)
Overview 1 RT 1: 40696-43944 bp Neighborhood of RT #1 [40696, 43958] RVT-GII PRK10276 Feature: gene Location: 40696-40877 bp Feature: gene Location: 41179-41409 bp Feature: gene Location: 41643-43127 bp Ori: ATO08189.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42045-42735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42045-42735 bp Feature: gene Location: 43127-43378 bp Feature: gene Location: 43533-43958 bp Ori: ATO08191.1 Feature: domain Description: PRK10276 Location: 43536-43944 bp Feature: domain Description: PRK1 0276 Location: 43536-43944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP023487.1 Klebsiella pneumoniae subsp. pneumoniae strain ST101:960186733 chromosome, complete genome (5498599 bp)
Overview 1 RT 1: 1815567-1818611 bp 2 RT 2: 2128960-2133413 bp 3 RT 3: 2270772-2274489 bp 4 RT 4: 2309618-2315372 bp 5 RT 5: 2419369-2422980 bp 6 RT 6: 3775774-3779872 bp 7 RT 7: 3846081-3849835 bp 8 RT 8: 3929682-3933636 bp 9 RT 9: 4023870-4028895 bp 10 RT 10: 4091215-4096830 bp Neighborhood of RT #1 [1815567, 1818967] RVT-GII PHA02515 Neighborhood of RT #2 [2128960, 2133415] PRK10982 RVT-GII PRK10982 mglC Neighborhood of RT #3 [2270772, 2274500] dacD RVT-GII PRK10016 Neighborhood of RT #4 [2309618, 2315372] Nuc_deoxyrib_tr RVT-Retrons AAA_15 Neighborhood of RT #5 [2419369, 2422980] PinE XerC RVT-GII Neighborhood of RT #6 [3775774, 3779883] umuC PRK10276 RVT-GII DinI Neighborhood of RT #7 [3846081, 3850128] PRK10597 RVT-GII TS_Pyrimidine_HMase Neighborhood of RT #8 [3929682, 3933647] PRK10598 PRK05451 RVT-GII PRK10597 Neighborhood of RT #9 [4023870, 4029491] MobA_MobL RVT-GII DUF4238 Neighborhood of RT #10 [4091215, 4096832] Lrp asnC RVT-GII PRK10554 Feature: gene Location: 1815567-1815806 bp Feature: gene Location: 1815806-1816144 bp Feature: gene Location: 1816241-1817725 bp Ori: ATO04577.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1816643-1817333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1816643-1817333 bp Feature: gene Location: 1817725-1817976 bp Feature: gene Location: 1818260-1818967 bp Feature: domain Description: PHA02515 Location: 1818272-1818611 bp Feature: domain Description: PHA02 515 Location: 18182 72 -1818611 bp Feature: gene Location: 2128960-2130075 bp Feature: domain Description: PRK10982 Location: 2129008-2130076 bp Feature: domain Description: PRK10982 Location: 2 12 9008-2 130076 bp Feature: gene Location: 2130194-2130445 bp Feature: gene Location: 2130445-2131929 bp Ori: ATO04846.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2130847-2131537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 130847-2 131537 bp Feature: gene Location: 2131979-2132389 bp Feature: domain Description: PRK10982 Location: 2131988-2132387 bp Feature: domain Description: PRK10982 Location: 2 131988-2 132 387 bp Feature: gene Location: 2132405-2133415 bp Ori: ATO04847.1 Feature: domain Description: mglC Location: 2132408-2133413 bp Feature: domain Description: mglC Location: 2 132 408-2 133413 bp Feature: gene Location: 2270772-2271941 bp Ori: ATO04949.1 Feature: domain Description: dacD Location: 2270781-2271936 bp Feature: domain Description: dacD Location: 2 2 70781-2 2 71936 bp Feature: gene Location: 2272210-2272461 bp Feature: gene Location: 2272461-2273945 bp Ori: ATO04951.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2272863-2273553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 72 863-2 2 73553 bp Feature: gene Location: 2273891-2274118 bp Feature: gene Location: 2274027-2274500 bp Ori: ATO04953.1 Feature: domain Description: PRK10016 Location: 2274030-2274489 bp Feature: domain Description: PRK10016 Location: 2 2 74030-2 2 74489 bp Feature: gene Location: 2309618-2310112 bp Ori: ATO07990.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 2309762-2309936 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 2 309762 -2 309936 bp Feature: gene Location: 2310132-2310287 bp Feature: gene Location: 2310768-2311868 bp Ori: ATO04988.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2310951-2311479 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 310951-2 311479 bp Feature: gene Location: 2311983-2314259 bp Ori: ATO04989.1 Feature: domain Description: AAA_15 Location: 2312016-2313024 bp Feature: domain Description: AAA_15 Location: 2 312 016-2 31302 4 bp Feature: gene Location: 2315142-2315372 bp Feature: gene Location: 2419369-2419947 bp Ori: ATO05086.1 Feature: domain Description: PinE Location: 2419372-2419918 bp Feature: domain Description: PinE Location: 2 419372 -2 419918 bp Feature: gene Location: 2419998-2420420 bp Ori: ATO05087.1 Feature: domain Description: XerC Location: 2420073-2420379 bp Feature: domain Description: XerC Location: 2 42 0073-2 42 0379 bp Feature: gene Location: 2420853-2422337 bp Ori: ATO05088.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2421255-2421945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 42 12 55-2 42 1945 bp Feature: gene Location: 2422337-2422588 bp Feature: gene Location: 2422741-2422980 bp Feature: gene Location: 3775774-3777039 bp Ori: ATO06360.1 Feature: domain Description: umuC Location: 3775777-3777037 bp Feature: domain Description: umuC Location: 3775777-3777037 bp Feature: gene Location: 3777042-3777461 bp Ori: ATO06361.1 Feature: domain Description: PRK10276 Location: 3777045-3777456 bp Feature: domain Description: PRK102 76 Location: 3777045-3777456 bp Feature: gene Location: 3777540-3779024 bp Ori: ATO06362.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3777942-3778632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3777942 -3778632 bp Feature: gene Location: 3779024-3779275 bp Feature: gene Location: 3779641-3779883 bp Ori: ATO06364.1 Feature: domain Description: DinI Location: 3779692-3779872 bp Feature: domain Description: DinI Location: 3779692 -3779872 bp Feature: gene Location: 3846081-3846371 bp Feature: gene Location: 3846383-3846616 bp Ori: ATO06437.1 Feature: domain Description: PRK10597 Location: 3846386-3846611 bp Feature: domain Description: PRK10597 Location: 3846386-3846611 bp Feature: gene Location: 3846695-3848179 bp Ori: ATO06438.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3847097-3847787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3847097-3847787 bp Feature: gene Location: 3848179-3848430 bp Feature: gene Location: 3849151-3850128 bp Ori: ATO06440.1 Feature: domain Description: TS_Pyrimidine_HMase Location: 3849196-3849835 bp Feature: domain Description: TS_Pyrimidine_HMase Location: 3849196-3849835 bp Feature: gene Location: 3929682-3930242 bp Ori: ATO06514.1 Feature: domain Description: PRK10598 Location: 3929685-3930240 bp Feature: domain Description: PRK10598 Location: 392 9685-39302 40 bp Feature: gene Location: 3930368-3931414 bp Ori: ATO06515.1 Feature: domain Description: PRK05451 Location: 3930383-3931409 bp Feature: domain Description: PRK05451 Location: 3930383-3931409 bp Feature: gene Location: 3931507-3932991 bp Ori: ATO06516.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3931909-3932599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3931909-3932 599 bp Feature: gene Location: 3932991-3933242 bp Feature: gene Location: 3933396-3933647 bp Ori: ATO06518.1 Feature: domain Description: PRK10597 Location: 3933399-3933636 bp Feature: domain Description: PRK10597 Location: 3933399-3933636 bp Feature: gene Location: 4023870-4025270 bp Ori: ATO06605.1 Feature: domain Description: MobA_MobL Location: 4023921-4024458 bp Feature: domain Description: MobA_MobL Location: 402 392 1-402 4458 bp Feature: gene Location: 4025348-4025998 bp Feature: gene Location: 4026141-4027625 bp Ori: ATO06607.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4026543-4027233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 402 6543-402 72 33 bp Feature: gene Location: 4027625-4027876 bp Feature: gene Location: 4028487-4029491 bp Ori: ATO06609.1 Feature: domain Description: DUF4238 Location: 4028511-4028895 bp Feature: domain Description: DUF42 38 Location: 402 8511-402 8895 bp Feature: gene Location: 4091215-4091676 bp Ori: ATO08072.1 Feature: domain Description: Lrp Location: 4091218-4091656 bp Feature: domain Description: Lrp Location: 40912 18-4091656 bp Feature: gene Location: 4091852-4093252 bp Ori: ATO06668.1 Feature: domain Description: asnC Location: 4091858-4093250 bp Feature: domain Description: asnC Location: 4091858-40932 50 bp Feature: gene Location: 4093863-4095347 bp Ori: ATO06669.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4094265-4094955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40942 65-4094955 bp Feature: gene Location: 4095347-4095598 bp Feature: gene Location: 4095753-4096832 bp Ori: ATO06671.1 Feature: domain Description: PRK10554 Location: 4095798-4096830 bp Feature: domain Description: PRK10554 Location: 4095798-4096830 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PHA02515 (hypothetical protein; Provisional), PRK10982 (galactose/methyl galaxtoside transporter ATP-binding protein; Provisional), mglC (PRK09478), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175), PinE (COG1961)
XerC (COG4973), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183), PRK10597 (DNA damage-inducible protein I; Provisional), TS_Pyrimidine_HMase (cl19097), PRK10598 (lipoprotein; Provisional), PRK05451 (dihydroorotase; Provisional), MobA_MobL (pfam03389), DUF4238 (pfam14022)
Lrp (COG1522), asnC (PRK03932), PRK10554 (outer membrane porin protein C; Provisional)

Seq: CP023489.1 Klebsiella pneumoniae subsp. pneumoniae strain ST101:960186733 plasmid p19-10_02, complete sequence (124323 bp)
Overview 1 RT 1: 3781-7862 bp Neighborhood of RT #1 [3781, 7999] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 3781-4212 bp Ori: ATO08352.1 Feature: domain Description: PRK10276 Location: 3832-4195 bp Feature: domain Description: PRK10276 Location: 3 83 2-4195 bp Feature: gene Location: 4370-4621 bp Feature: gene Location: 4621-6105 bp Ori: ATO08354.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5023-5713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5023 -5713 bp Feature: gene Location: 6354-7325 bp Ori: ATO08355.1 Feature: domain Description: StbA Location: 6357-7302 bp Feature: domain Description: StbA Location: 63 57-73 02 bp Feature: gene Location: 7328-7999 bp Ori: ATO08356.1 Feature: domain Description: Plasmid_stab_B Location: 7343-7550 bp Feature: domain Description: Plasmid_stab_B Location: 73 43 -7550 bp Feature: domain Description: Plasmid_stab_B Location: 7655-7862 bp Feature: domain Description: Plasmid_stab_B Location: 7655-7862 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)