myRT

myRT report for GCA_001362095.2_034151_4

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Seq: LT904867.1 Salmonella enterica subsp. enterica serovar Typhi strain ERL034151 genome assembly, chromosome: 1 (4835677 bp)
Overview 1 RT 1: 3716255-3722721 bp 2 RT 2: 4144312-4148030 bp Neighborhood of RT #1 [3716255, 3722735] type_I_sec_LssB type_I_hlyD type_I_hlyD RVT-Retrons PRK09678 D Neighborhood of RT #2 [4144312, 4148071] DDE_Tnp_IS66_C RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 Feature: gene Location: 3716255-3718435 bp Feature: domain Description: type_I_sec_LssB Location: 3716315-3718388 bp Feature: domain Description: type_I_sec_LssB Location: 371 631 5-371 8388 bp Feature: gene Location: 3718416-3719606 bp Feature: domain Description: type_I_hlyD Location: 3718497-3718941 bp Feature: domain Description: type_I_hlyD Location: 371 8497-371 8941 bp Feature: domain Description: type_I_hlyD Location: 3718980-3719604 bp Feature: domain Description: type_I_hlyD Location: 371 8980-371 9604 bp Feature: gene Location: 3720149-3720922 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3720209-3720743 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3720209-3720743 bp Feature: gene Location: 3721326-3721544 bp Feature: domain Description: PRK09678 Location: 3721329-3721527 bp Feature: domain Description: PRK09678 Location: 3721 329-3721 527 bp Feature: gene Location: 3721635-3722735 bp Feature: domain Description: D Location: 3721641-3722721 bp Feature: domain Description: D Location: 3721 641 -3722721 bp Feature: gene Location: 4144312-4144464 bp Feature: gene Location: 4144676-4144822 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4144688-4144799 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 41 44688-41 44799 bp Feature: gene Location: 4144938-4146170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4145139-4145793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 451 39-41 45793 bp Feature: domain Description: GIIM Note: maturase Location: 4145871-4146093 bp Feature: domain Description: GIIM Note: maturase Location: 41 45871 -41 46093 bp Feature: gene Location: 4146263-4146424 bp Feature: gene Location: 4146632-4148071 bp Feature: domain Description: LZ_Tnp_IS66 Location: 4146770-4146995 bp Feature: domain Description: LZ_Tnp_IS66 Location: 41 46770-41 46995 bp Feature: domain Description: zf-IS66 Location: 4147016-4147148 bp Feature: domain Description: zf-IS66 Location: 41 4701 6-41 471 48 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4147193-4148030 bp Feature: domain Description: DDE_Tnp_IS66 Location: 41 471 93-41 48030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT type_I_sec_LssB (TIGR03375), type_I_hlyD (TIGR01843), RVT-Retrons, PRK09678 (DNA-binding transcriptional regulator; Provisional), D (PHA02561), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005)
DDE_Tnp_IS66 (pfam03050)