myRT

myRT report for GCA_001406795.1_Comamonas_testosteroni_P19

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Seq: LN879547.1 Comamonas testosteroni P19 genome assembly Comamonas testosteroni P19, chromosome : I (5632239 bp)
Overview 1 RT 1: 720855-728274 bp 2 RT 2: 2927822-2934687 bp 3 RT 3: 3437039-3444677 bp Neighborhood of RT #1 [720855, 728274] KdsA pyrG RVT_N RVT-GII GIIM HNH PRK05579 Neighborhood of RT #2 [2927822, 2934710] RVT-UG7 Acetyltransf_3 Histone_HNS Neighborhood of RT #3 [3437039, 3444679] PRK10700 ScpB RVT_N RVT-GII GIIM HNHc RluA mltD nlpD nlpD Feature: gene Location: 720855-721712 bp Feature: domain Description: KdsA Location: 720858-721692 bp Feature: domain Description: KdsA Location: 720858-721 692 bp Feature: gene Location: 721863-723524 bp Feature: domain Description: pyrG Location: 721866-723504 bp Feature: domain Description: pyrG Location: 721 866-723504 bp Feature: gene Location: 723692-725386 bp Feature: domain Description: RVT_N Location: 723749-723989 bp Feature: domain Description: RVT_N Location: 723749-723989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 724040-724688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 724040-724688 bp Feature: domain Description: GIIM Note: maturase Location: 724742-724973 bp Feature: domain Description: GIIM Note: maturase Location: 724742-724973 bp Feature: domain Description: HNH Note: nucleases Location: 725219-725354 bp Feature: domain Description: HNH Note: nucleases Location: 72521 9-725354 bp Feature: gene Location: 726506-727732 bp Feature: domain Description: PRK05579 Location: 726521-727715 bp Feature: domain Description: PRK05579 Location: 726521 -72771 5 bp Feature: gene Location: 727756-728274 bp Feature: gene Location: 2927822-2928451 bp Feature: gene Location: 2928607-2930637 bp Feature: gene Location: 2931839-2933413 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2932265-2932658 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2932265-2932658 bp Feature: gene Location: 2933561-2934043 bp Feature: domain Description: Acetyltransf_3 Location: 2933573-2933849 bp Feature: domain Description: Acetyltransf_3 Location: 2933573-2933849 bp Feature: gene Location: 2934360-2934710 bp Feature: domain Description: Histone_HNS Location: 2934441-2934687 bp Feature: domain Description: Histone_HNS Location: 2934441 -2934687 bp Feature: gene Location: 3437039-3438628 bp Feature: domain Description: PRK10700 Location: 3437525-3438251 bp Feature: domain Description: PRK1 0700 Location: 3437525-3438251 bp Feature: gene Location: 3438625-3439797 bp Feature: domain Description: ScpB Location: 3438640-3439150 bp Feature: domain Description: ScpB Location: 3438640-34391 50 bp Feature: gene Location: 3440042-3441745 bp Feature: domain Description: RVT_N Location: 3440099-3440339 bp Feature: domain Description: RVT_N Location: 3440099-3440339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3440390-3441038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3440390-3441 038 bp Feature: domain Description: GIIM Note: maturase Location: 3441089-3441323 bp Feature: domain Description: GIIM Note: maturase Location: 3441 089-3441 323 bp Feature: domain Description: HNHc Note: nucleases Location: 3441551-3441701 bp Feature: domain Description: HNHc Note: nucleases Location: 3441 551 -3441 701 bp Feature: gene Location: 3442740-3443816 bp Feature: domain Description: RluA Location: 3442869-3443739 bp Feature: domain Description: RluA Location: 3442869-3443739 bp Feature: gene Location: 3443819-3444679 bp Feature: domain Description: mltD Location: 3443861-3443957 bp Feature: domain Description: mltD Location: 3443861 -3443957 bp Feature: domain Description: nlpD Location: 3444002-3444134 bp Feature: domain Description: nlpD Location: 3444002-34441 34 bp Feature: domain Description: nlpD Location: 3444212-3444677 bp Feature: domain Description: nlpD Location: 344421 2-3444677 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KdsA (COG2877), pyrG (PRK05380), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PRK05579 (bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated), RVT-UG7, Acetyltransf_3 (pfam13302), Histone_HNS (pfam00816)
PRK10700 (23S rRNA pseudouridine(2605) synthase RluB), ScpB (COG1386), HNHc (smart00507), RluA (COG0564), mltD (PRK10783), nlpD (PRK10871)