myRT

myRT report for GCA_001420855.1_ASM142085v1

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Seq: CP013055.1 Bacillus thuringiensis strain YWC2-8, complete genome (5674369 bp)
Overview 1 RT 1: 79908-83807 bp 2 RT 2: 330777-335441 bp 3 RT 3: 454645-458410 bp 4 RT 4: 727348-731282 bp 5 RT 5: 768690-774102 bp 6 RT 6: 1947354-1955395 bp 7 RT 7: 2149444-2155792 bp 8 RT 8: 2327338-2331677 bp 9 RT 9: 2657811-2662403 bp 10 RT 10: 2670836-2677045 bp 11 RT 11: 2863274-2868482 bp 12 RT 12: 3314911-3321618 bp 13 RT 13: 3785763-3789435 bp 14 RT 14: 3850953-3855309 bp 15 RT 15: 4868751-4872131 bp 16 RT 16: 5257864-5261871 bp Neighborhood of RT #1 [79908, 83812] DppB RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #2 [330777, 335452] DDE_Tnp_1 RVT-GII GIIM SrmB RRM_BsYxiN_like Neighborhood of RT #3 [454645, 458448] DDE_Tnp_1 RVT-GII GIIM UvdE Neighborhood of RT #4 [727348, 731282] DDE_Tnp_1 RVT-GII GIIM Neighborhood of RT #5 [768690, 774104] NupC RVT-GII HNHc NupC NupC Neighborhood of RT #6 [1947354, 1955418] rnc SMC_prok_B RVT-GII HNHc SMC_prok_B PRK10416 Neighborhood of RT #7 [2149444, 2155857] CdnL FadH RVT-GII HNHc OYE_like_FMN GltS_FMN Neighborhood of RT #8 [2327338, 2331802] DDE_Tnp_1 RVT-GII GIIM COG4584 Neighborhood of RT #9 [2657811, 2662417] DDE_Tnp_1 RVT-GII GIIM Sulfotransfer_2 Neighborhood of RT #10 [2670836, 2677209] OmpR RVT-GII HNHc BaeS Uup Uup Neighborhood of RT #11 [2863274, 2868487] DDE_Tnp_1 RVT-GII GIIM PRK06914 Neighborhood of RT #12 [3314911, 3321629] MgtE RimL RVT-GII Intron_maturas2 HNHc Lysozyme_like YxeA Neighborhood of RT #13 [3785763, 3789440] RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #14 [3850953, 3855314] CC3_like_SDR_a RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #15 [4868751, 4872145] RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #16 [5257864, 5261876] VOC_Bs_YwkD_like RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 79908-80279 bp Feature: domain Description: DppB Location: 79914-80274 bp Feature: domain Description: DppB Location: 7991 4-80274 bp Feature: gene Location: 80406-80675 bp Feature: gene Location: 80942-82249 bp Ori: ALL61813.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81227-81866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 227-81 866 bp Feature: domain Description: GIIM Note: maturase Location: 81941-82166 bp Feature: domain Description: GIIM Note: maturase Location: 81 941 -821 66 bp Feature: gene Location: 82423-82602 bp Feature: gene Location: 82763-83812 bp Feature: domain Description: DDE_Tnp_1 Location: 83120-83807 bp Feature: domain Description: DDE_Tnp_1 Location: 831 20-83807 bp Feature: gene Location: 330777-331826 bp Feature: domain Description: DDE_Tnp_1 Location: 331134-331821 bp Feature: domain Description: DDE_Tnp_1 Location: 331 1 34-331 821 bp Feature: gene Location: 331987-332166 bp Feature: gene Location: 332340-333647 bp Ori: ALL61821.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332625-333264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332625-333264 bp Feature: domain Description: GIIM Note: maturase Location: 333339-333564 bp Feature: domain Description: GIIM Note: maturase Location: 333339-333564 bp Feature: gene Location: 333914-334183 bp Feature: gene Location: 334310-335452 bp Feature: domain Description: SrmB Location: 334316-335219 bp Feature: domain Description: SrmB Location: 33431 6-33521 9 bp Feature: domain Description: RRM_BsYxiN_like Location: 335228-335441 bp Feature: domain Description: RRM_BsYxiN_like Location: 335228-335441 bp Feature: gene Location: 454645-455694 bp Feature: domain Description: DDE_Tnp_1 Location: 455002-455689 bp Feature: domain Description: DDE_Tnp_1 Location: 455002-455689 bp Feature: gene Location: 455855-456034 bp Feature: gene Location: 456208-457515 bp Ori: ALL61824.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 456493-457132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 456493-4571 32 bp Feature: domain Description: GIIM Note: maturase Location: 457207-457432 bp Feature: domain Description: GIIM Note: maturase Location: 457207-457432 bp Feature: gene Location: 457782-458051 bp Feature: gene Location: 458134-458448 bp Ori: ALL61825.1 Feature: domain Description: UvdE Location: 458149-458410 bp Feature: domain Description: UvdE Location: 4581 49-45841 0 bp Feature: gene Location: 727348-728397 bp Feature: domain Description: DDE_Tnp_1 Location: 727705-728392 bp Feature: domain Description: DDE_Tnp_1 Location: 727705-728392 bp Feature: gene Location: 728558-728737 bp Feature: gene Location: 728911-730218 bp Ori: ALL61839.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 729196-729835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7291 96-729835 bp Feature: domain Description: GIIM Note: maturase Location: 729910-730135 bp Feature: domain Description: GIIM Note: maturase Location: 72991 0-7301 35 bp Feature: gene Location: 730485-730754 bp Feature: gene Location: 730962-731282 bp Feature: gene Location: 768690-769595 bp Ori: ALL57073.1 Feature: domain Description: NupC Location: 768693-769584 bp Feature: domain Description: NupC Location: 768693-769584 bp Feature: gene Location: 770038-770292 bp Feature: gene Location: 770324-772120 bp Ori: ALL57075.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 770618-771314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77061 8-771 31 4 bp Feature: domain Description: HNHc Note: nucleases Location: 771914-771989 bp Feature: domain Description: HNHc Note: nucleases Location: 771 91 4-771 989 bp Feature: gene Location: 772286-772573 bp Ori: ALL57076.1 Feature: domain Description: NupC Location: 772292-772571 bp Feature: domain Description: NupC Location: 772292-772571 bp Feature: gene Location: 772923-774104 bp Ori: ALL57077.1 Feature: domain Description: NupC Location: 772926-774102 bp Feature: domain Description: NupC Location: 772926-7741 02 bp Feature: gene Location: 1947354-1948091 bp Ori: ALL58291.1 Feature: domain Description: rnc Location: 1947405-1948083 bp Feature: domain Description: rnc Location: 1 947405-1 948083 bp Feature: gene Location: 1948238-1948729 bp Ori: ALL58292.1 Feature: domain Description: SMC_prok_B Location: 1948244-1948712 bp Feature: domain Description: SMC_prok_B Location: 1 948244-1 94871 2 bp Feature: gene Location: 1949403-1951208 bp Ori: ALL58293.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1949697-1950393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 949697-1 950393 bp Feature: domain Description: HNHc Note: nucleases Location: 1950954-1951092 bp Feature: domain Description: HNHc Note: nucleases Location: 1 950954-1 951 092 bp Feature: gene Location: 1951552-1954413 bp Ori: ALL58294.1 Feature: domain Description: SMC_prok_B Location: 1951558-1954381 bp Feature: domain Description: SMC_prok_B Location: 1 951 558-1 954381 bp Feature: gene Location: 1954429-1955418 bp Ori: ALL58295.1 Feature: domain Description: PRK10416 Location: 1954453-1955395 bp Feature: domain Description: PRK1 041 6 Location: 1 954453-1 955395 bp Feature: gene Location: 2149444-2149920 bp Ori: ALL58479.1 Feature: domain Description: CdnL Location: 2149462-2149915 bp Feature: domain Description: CdnL Location: 21 49462-21 4991 5 bp Feature: gene Location: 2150482-2150736 bp Ori: ALL58480.1 Feature: domain Description: FadH Location: 2150569-2150701 bp Feature: domain Description: FadH Location: 21 50569-21 50701 bp Feature: gene Location: 2151399-2153204 bp Ori: ALL58481.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2151693-2152389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 51 693-21 52389 bp Feature: domain Description: HNHc Note: nucleases Location: 2152950-2153088 bp Feature: domain Description: HNHc Note: nucleases Location: 21 52950-21 53088 bp Feature: gene Location: 2153304-2154215 bp Feature: domain Description: OYE_like_FMN Location: 2153310-2154186 bp Feature: domain Description: OYE_like_FMN Location: 21 5331 0-21 541 86 bp Feature: gene Location: 2154283-2155857 bp Ori: ALL58482.1 Feature: domain Description: GltS_FMN Location: 2154430-2155792 bp Feature: domain Description: GltS_FMN Location: 21 54430-21 55792 bp Feature: gene Location: 2327338-2328387 bp Feature: domain Description: DDE_Tnp_1 Location: 2327695-2328382 bp Feature: domain Description: DDE_Tnp_1 Location: 2327695-2328382 bp Feature: gene Location: 2328548-2328727 bp Feature: gene Location: 2328901-2330208 bp Ori: ALL61889.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2329186-2329825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23291 86-2329825 bp Feature: domain Description: GIIM Note: maturase Location: 2329900-2330125 bp Feature: domain Description: GIIM Note: maturase Location: 2329900-23301 25 bp Feature: gene Location: 2330475-2330744 bp Feature: gene Location: 2330873-2331802 bp Feature: domain Description: COG4584 Location: 2331287-2331677 bp Feature: domain Description: COG4584 Location: 2331 287-2331 677 bp Feature: gene Location: 2657811-2658860 bp Feature: domain Description: DDE_Tnp_1 Location: 2658168-2658855 bp Feature: domain Description: DDE_Tnp_1 Location: 26581 68-2658855 bp Feature: gene Location: 2659021-2659200 bp Feature: gene Location: 2659374-2660681 bp Ori: ALL61903.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2659659-2660298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2659659-2660298 bp Feature: domain Description: GIIM Note: maturase Location: 2660373-2660598 bp Feature: domain Description: GIIM Note: maturase Location: 2660373-2660598 bp Feature: gene Location: 2660948-2661217 bp Feature: gene Location: 2661629-2662417 bp Ori: ALL58941.1 Feature: domain Description: Sulfotransfer_2 Location: 2661692-2662403 bp Feature: domain Description: Sulfotransfer_2 Location: 2661 692-2662403 bp Feature: gene Location: 2670836-2671543 bp Ori: ALL58951.1 Feature: domain Description: OmpR Location: 2670845-2671514 bp Feature: domain Description: OmpR Location: 2670845-2671 51 4 bp Feature: gene Location: 2671540-2671791 bp Feature: gene Location: 2672465-2674270 bp Ori: ALL58953.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2672759-2673455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2672759-2673455 bp Feature: domain Description: HNHc Note: nucleases Location: 2674016-2674154 bp Feature: domain Description: HNHc Note: nucleases Location: 267401 6-26741 54 bp Feature: gene Location: 2674371-2675129 bp Feature: domain Description: BaeS Location: 2674413-2675112 bp Feature: domain Description: BaeS Location: 267441 3-26751 1 2 bp Feature: gene Location: 2675581-2677209 bp Ori: ALL61904.1 Feature: domain Description: Uup Location: 2675590-2675821 bp Feature: domain Description: Uup Location: 2675590-2675821 bp Feature: domain Description: Uup Location: 2675836-2677045 bp Feature: domain Description: Uup Location: 2675836-2677045 bp Feature: gene Location: 2863274-2864323 bp Feature: domain Description: DDE_Tnp_1 Location: 2863631-2864318 bp Feature: domain Description: DDE_Tnp_1 Location: 2863631 -286431 8 bp Feature: gene Location: 2864484-2864663 bp Feature: gene Location: 2864837-2866144 bp Ori: ALL61911.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2865122-2865761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28651 22-2865761 bp Feature: domain Description: GIIM Note: maturase Location: 2865836-2866061 bp Feature: domain Description: GIIM Note: maturase Location: 2865836-2866061 bp Feature: gene Location: 2866411-2866680 bp Feature: gene Location: 2867642-2868487 bp Ori: ALL59123.1 Feature: domain Description: PRK06914 Location: 2867645-2868482 bp Feature: domain Description: PRK0691 4 Location: 2867645-2868482 bp Feature: gene Location: 3314911-3316239 bp Ori: ALL59538.1 Feature: domain Description: MgtE Location: 3314926-3316231 bp Feature: domain Description: MgtE Location: 331 4926-331 6231 bp Feature: gene Location: 3316874-3317380 bp Ori: ALL59539.1 Feature: domain Description: RimL Location: 3316883-3317378 bp Feature: domain Description: RimL Location: 331 6883-331 7378 bp Feature: gene Location: 3317877-3319700 bp Ori: ALL59540.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3318141-3318975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331 81 41 -331 8975 bp Feature: domain Description: Intron_maturas2 Location: 3319044-3319383 bp Feature: domain Description: Intron_maturas2 Location: 331 9044-331 9383 bp Feature: domain Description: HNHc Note: nucleases Location: 3319521-3319677 bp Feature: domain Description: HNHc Note: nucleases Location: 331 9521 -331 9677 bp Feature: gene Location: 3320276-3320857 bp Ori: ALL59541.1 Feature: domain Description: Lysozyme_like Location: 3320411-3320846 bp Feature: domain Description: Lysozyme_like Location: 332041 1 -3320846 bp Feature: gene Location: 3321273-3321629 bp Ori: ALL61932.1 Feature: domain Description: YxeA Location: 3321312-3321618 bp Feature: domain Description: YxeA Location: 3321 31 2-3321 61 8 bp Feature: gene Location: 3785763-3785948 bp Feature: gene Location: 3786034-3786303 bp Feature: gene Location: 3786570-3787877 bp Ori: ALL61942.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3786855-3787494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3786855-3787494 bp Feature: domain Description: GIIM Note: maturase Location: 3787569-3787794 bp Feature: domain Description: GIIM Note: maturase Location: 3787569-3787794 bp Feature: gene Location: 3788051-3788230 bp Feature: gene Location: 3788391-3789440 bp Feature: domain Description: DDE_Tnp_1 Location: 3788748-3789435 bp Feature: domain Description: DDE_Tnp_1 Location: 3788748-3789435 bp Feature: gene Location: 3850953-3851612 bp Ori: ALL60025.1 Feature: domain Description: CC3_like_SDR_a Location: 3850968-3851598 bp Feature: domain Description: CC3_like_SDR_a Location: 3850968-3851 598 bp Feature: gene Location: 3851908-3852177 bp Feature: gene Location: 3852444-3853751 bp Ori: ALL61947.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3852729-3853368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3852729-3853368 bp Feature: domain Description: GIIM Note: maturase Location: 3853443-3853668 bp Feature: domain Description: GIIM Note: maturase Location: 3853443-3853668 bp Feature: gene Location: 3853925-3854104 bp Feature: gene Location: 3854265-3855314 bp Feature: domain Description: DDE_Tnp_1 Location: 3854622-3855309 bp Feature: domain Description: DDE_Tnp_1 Location: 3854622-3855309 bp Feature: gene Location: 4868751-4869137 bp Feature: gene Location: 4869444-4869701 bp Feature: gene Location: 4869977-4871284 bp Ori: ALL61977.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4870262-4870901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4870262-4870901 bp Feature: domain Description: GIIM Note: maturase Location: 4870976-4871201 bp Feature: domain Description: GIIM Note: maturase Location: 4870976-4871 201 bp Feature: gene Location: 4871458-4871637 bp Feature: gene Location: 4871789-4872145 bp Ori: ALL61066.1 Feature: domain Description: DDE_Tnp_1 Location: 4871945-4872131 bp Feature: domain Description: DDE_Tnp_1 Location: 4871 945-48721 31 bp Feature: gene Location: 5257864-5258250 bp Ori: ALL61455.1 Feature: domain Description: VOC_Bs_YwkD_like Location: 5257879-5258245 bp Feature: domain Description: VOC_Bs_YwkD_like Location: 5257879-5258245 bp Feature: gene Location: 5258470-5258739 bp Feature: gene Location: 5259006-5260313 bp Ori: ALL61983.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5259291-5259930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5259291 -5259930 bp Feature: domain Description: GIIM Note: maturase Location: 5260005-5260230 bp Feature: domain Description: GIIM Note: maturase Location: 5260005-5260230 bp Feature: gene Location: 5260487-5260666 bp Feature: gene Location: 5260827-5261876 bp Feature: domain Description: DDE_Tnp_1 Location: 5261184-5261871 bp Feature: domain Description: DDE_Tnp_1 Location: 5261 1 84-5261 871 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DppB (COG0601), RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609), SrmB (COG0513), RRM_BsYxiN_like (cd12500), UvdE (pfam03851), NupC (COG1972), HNHc (smart00507), rnc (PRK00102)
SMC_prok_B (TIGR02168), PRK10416 (signal recognition particle-docking protein FtsY; Provisional), CdnL (COG1329), FadH (COG1902), OYE_like_FMN (cd02933), GltS_FMN (cd02808), COG4584 (Transposase ), Sulfotransfer_2 (pfam03567), OmpR (COG0745), BaeS (COG0642)
Uup (COG0488), PRK06914 (SDR family oxidoreductase), MgtE (pfam01769), RimL (COG1670), Intron_maturas2 (pfam01348), Lysozyme_like (pfam13702), YxeA (COG5294), CC3_like_SDR_a (cd05250), VOC_Bs_YwkD_like (cd08352)

Seq: CP013059.1 Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-4, complete sequence (80699 bp)
Overview 1 RT 1: 72611-78918 bp Neighborhood of RT #1 [72611, 78918] VirB4_CagE Lysozyme_like RVT-GII HNHc Lysozyme_like Spr Feature: gene Location: 72611-74545 bp Ori: ALL62459.1 Feature: domain Description: VirB4_CagE Location: 72941-74456 bp Feature: domain Description: VirB4_CagE Location: 72 941-74456 bp Feature: gene Location: 74547-74933 bp Ori: ALL62460.1 Feature: domain Description: Lysozyme_like Location: 74766-74913 bp Feature: domain Description: Lysozyme_like Location: 74766-74913 bp Feature: gene Location: 75607-77412 bp Ori: ALL62461.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75901-76597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75901-76597 bp Feature: domain Description: HNHc Note: nucleases Location: 77158-77296 bp Feature: domain Description: HNHc Note: nucleases Location: 77158-772 96 bp Feature: gene Location: 77510-78286 bp Feature: domain Description: Lysozyme_like Location: 77516-77867 bp Feature: domain Description: Lysozyme_like Location: 77516-77867 bp Feature: domain Description: Spr Location: 77882-78269 bp Feature: domain Description: Spr Location: 77882 -782 69 bp Feature: gene Location: 78310-78918 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4_CagE (TIGR00929), Lysozyme_like (pfam13702), RVT-GII, HNHc (smart00507), Spr (COG0791)

Seq: CP013056.1 Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-1, complete sequence (250706 bp)
Overview 1 RT 1: 5657-12886 bp 2 RT 2: 57232-70077 bp 3 RT 3: 96306-102057 bp 4 RT 4: 108061-122689 bp 5 RT 5: 179681-184947 bp Neighborhood of RT #1 [5657, 12886] KOG1000 KOG1000 RVT-GII GIIM Neighborhood of RT #2 [57232, 70077] TraG-D_C Ftsk_gamma RVT-GII GIIM HNHc RVT-GII HNHc RVT-GII Intron_maturas2 HNHc Neighborhood of RT #3 [96306, 102086] RVT-GII HNHc LPD1 DUF3854 Neighborhood of RT #4 [108061, 122689] TrbL CwlT_like RVT-GII HNHc CwlT_like RVT-GII HNHc CwlT_like RVT-GII Intron_maturas2 HNHc NlpD Spr Neighborhood of RT #5 [179681, 184952] RhaT RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 5657-6370 bp Feature: gene Location: 6387-8798 bp Feature: domain Description: KOG1000 Location: 7104-7320 bp Feature: domain Description: KOG1000 Location: 7104-73 20 bp Feature: domain Description: KOG1000 Location: 7923-8256 bp Feature: domain Description: KOG1000 Location: 7923 -8256 bp Feature: gene Location: 9067-10932 bp Ori: ALL62004.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9367-10072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 67-10072 bp Feature: domain Description: GIIM Note: maturase Location: 10159-10342 bp Feature: domain Description: GIIM Note: maturase Location: 10159-103 42 bp Feature: gene Location: 11694-12587 bp Feature: gene Location: 12659-12886 bp Feature: gene Location: 57232-58002 bp Feature: gene Location: 58274-60067 bp Feature: domain Description: TraG-D_C Location: 58289-58604 bp Feature: domain Description: TraG-D_C Location: 58289-58604 bp Feature: domain Description: Ftsk_gamma Location: 59012-59192 bp Feature: domain Description: Ftsk_gamma Location: 59012-59192 bp Feature: gene Location: 60297-62171 bp Ori: ALL62045.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60597-61302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60597-613 02 bp Feature: domain Description: GIIM Note: maturase Location: 61416-61584 bp Feature: domain Description: GIIM Note: maturase Location: 61416-61584 bp Feature: domain Description: HNHc Note: nucleases Location: 61932-62097 bp Feature: domain Description: HNHc Note: nucleases Location: 6193 2-62097 bp Feature: gene Location: 62844-63281 bp Feature: gene Location: 63347-65137 bp Ori: ALL62047.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63644-64340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63 644-643 40 bp Feature: domain Description: HNHc Note: nucleases Location: 64880-65012 bp Feature: domain Description: HNHc Note: nucleases Location: 64880-65012 bp Feature: gene Location: 66104-67927 bp Ori: ALL62048.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66374-67202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 663 74-67202 bp Feature: domain Description: Intron_maturas2 Location: 67274-67592 bp Feature: domain Description: Intron_maturas2 Location: 67274-67592 bp Feature: domain Description: HNHc Note: nucleases Location: 67745-67898 bp Feature: domain Description: HNHc Note: nucleases Location: 67745-67898 bp Feature: gene Location: 68528-69673 bp Feature: gene Location: 69691-70077 bp Feature: gene Location: 96306-97397 bp Feature: gene Location: 97832-98086 bp Feature: gene Location: 98118-99914 bp Ori: ALL62078.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98412-99108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98412-99108 bp Feature: domain Description: HNHc Note: nucleases Location: 99708-99783 bp Feature: domain Description: HNHc Note: nucleases Location: 99708-99783 bp Feature: gene Location: 99986-100783 bp Ori: ALL62079.1 Feature: domain Description: LPD1 Location: 100532-100727 bp Feature: domain Description: LPD1 Location: 10053 2-100727 bp Feature: gene Location: 100773-102086 bp Ori: ALL62080.1 Feature: domain Description: DUF3854 Location: 101718-102057 bp Feature: domain Description: DUF3 854 Location: 101718-102057 bp Feature: gene Location: 108061-112080 bp Ori: ALL62089.1 Feature: domain Description: TrbL Location: 108340-108838 bp Feature: domain Description: TrbL Location: 1083 40-10883 8 bp Feature: gene Location: 112077-113072 bp Ori: ALL62090.1 Feature: domain Description: CwlT_like Location: 112926-113049 bp Feature: domain Description: CwlT_like Location: 112926-113 049 bp Feature: gene Location: 113746-115551 bp Ori: ALL62091.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114040-114736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114040-11473 6 bp Feature: domain Description: HNHc Note: nucleases Location: 115297-115435 bp Feature: domain Description: HNHc Note: nucleases Location: 115297-11543 5 bp Feature: gene Location: 115667-115834 bp Ori: ALL62092.1 Feature: domain Description: CwlT_like Location: 115709-115817 bp Feature: domain Description: CwlT_like Location: 115709-115817 bp Feature: gene Location: 116607-118403 bp Ori: ALL62093.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116865-117570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116865-117570 bp Feature: domain Description: HNHc Note: nucleases Location: 118131-118266 bp Feature: domain Description: HNHc Note: nucleases Location: 11813 1-118266 bp Feature: gene Location: 118472-118663 bp Ori: ALL62094.1 Feature: domain Description: CwlT_like Location: 118499-118655 bp Feature: domain Description: CwlT_like Location: 118499-118655 bp Feature: gene Location: 119239-121062 bp Ori: ALL62095.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119503-120337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119503 -1203 3 7 bp Feature: domain Description: Intron_maturas2 Location: 120406-120745 bp Feature: domain Description: Intron_maturas2 Location: 120406-120745 bp Feature: domain Description: HNHc Note: nucleases Location: 120883-121039 bp Feature: domain Description: HNHc Note: nucleases Location: 120883 -12103 9 bp Feature: gene Location: 121174-122097 bp Feature: domain Description: NlpD Location: 121237-121669 bp Feature: domain Description: NlpD Location: 12123 7-121669 bp Feature: domain Description: Spr Location: 121702-122038 bp Feature: domain Description: Spr Location: 121702-12203 8 bp Feature: gene Location: 122114-122689 bp Feature: gene Location: 179681-180070 bp Feature: gene Location: 180216-181088 bp Ori: ALL62153.1 Feature: domain Description: RhaT Location: 180243-181077 bp Feature: domain Description: RhaT Location: 180243 -181077 bp Feature: gene Location: 182082-183389 bp Ori: ALL62210.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 182367-183006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1823 67-183 006 bp Feature: domain Description: GIIM Note: maturase Location: 183081-183306 bp Feature: domain Description: GIIM Note: maturase Location: 183 081-183 3 06 bp Feature: gene Location: 183563-183742 bp Feature: gene Location: 183903-184952 bp Feature: domain Description: DDE_Tnp_1 Location: 184263-184947 bp Feature: domain Description: DDE_Tnp_1 Location: 184263 -184947 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, GIIM (pfam08388), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), HNHc (smart00507), Intron_maturas2 (pfam01348), LPD1 (pfam18796), DUF3854 (pfam12965), TrbL (pfam04610)
CwlT_like, NlpD (COG0739), Spr (COG0791), RhaT (TIGR00776), DDE_Tnp_1 (pfam01609)