myRT

myRT report for GCA_001444325.1_ASM144432v1

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Seq: CP013131.1 Porphyromonas gingivalis A7A1-28, complete genome (2249024 bp)
Overview 1 RT 1: 438297-444011 bp 2 RT 2: 1993480-2000126 bp Neighborhood of RT #1 [438297, 444011] RVT-UG8 RVT-UG3 Neighborhood of RT #2 [1993480, 2000126] cas_Cmr5 Cmr6_III-B CRISPR_Cas6 RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 438297-438434 bp Feature: gene Location: 438716-438931 bp Feature: gene Location: 438984-441167 bp Ori: ALO29162.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 439599-440052 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 439599-440052 bp Feature: gene Location: 441164-442627 bp Ori: ALO29163.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 441620-442151 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 441 620-4421 51 bp Feature: gene Location: 442724-443506 bp Feature: gene Location: 443496-444011 bp Feature: gene Location: 1993480-1993923 bp Ori: ALO30431.1 Feature: domain Description: cas_Cmr5 Location: 1993519-1993819 bp Feature: domain Description: cas_Cmr5 Location: 1 99351 9-1 99381 9 bp Feature: gene Location: 1993920-1994687 bp Ori: ALO30432.1 Feature: domain Description: Cmr6_III-B Location: 1993995-1994670 bp Feature: domain Description: Cmr6_III-B Location: 1 993995-1 994670 bp Feature: gene Location: 1994743-1997838 bp Ori: ALO30433.1 Feature: domain Description: CRISPR_Cas6 Location: 1995277-1995631 bp Feature: domain Description: CRISPR_Cas6 Location: 1 995277-1 995631 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1995781-1996393 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 995781 -1 996393 bp Feature: domain Description: Cas1_I-II-III Location: 1996843-1997797 bp Feature: domain Description: Cas1 _I-II-III Location: 1 996843-1 997797 bp Feature: gene Location: 1997858-1998148 bp Ori: ALO30434.1 Feature: domain Description: Cas2_I_II_III Location: 1997879-1998098 bp Feature: domain Description: Cas2_I_II_III Location: 1 997879-1 998098 bp Feature: gene Location: 1999881-2000126 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, RVT-UG3, cas_Cmr5 (TIGR01881), Cmr6_III-B (cd09661), CRISPR_Cas6 (pfam10040), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)