myRT

myRT report for GCA_001444445.1_ASM144444v1

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Seq: CP013195.1 Prevotella enoeca strain F0113, complete genome (2861432 bp)
Overview 1 RT 1: 749662-761504 bp 2 RT 2: 1689043-1700698 bp 3 RT 3: 1703713-1710140 bp 4 RT 4: 2479683-2488687 bp Neighborhood of RT #1 [749662, 761704] AbiEii RVT_N RVT-GII GIIM N6_Mtase DUF2958 COG4646 PRK07726 Neighborhood of RT #2 [1689043, 1700952] PRK07726 N6_Mtase DUF2958 COG4646 RVT_N RVT-GII GIIM Abi_2 Neighborhood of RT #3 [1703713, 1710607] RVT-UG8 RVT-UG3 DUF3853 AAA_25 Neighborhood of RT #4 [2479683, 2488818] Cyt_bd_oxida_I DUF4492 RVT_N RVT-GII GIIM OMP_RagA_SusC SusD Feature: gene Location: 749662-750669 bp Ori: ALO48244.1 Feature: domain Description: AbiEii Location: 749800-750628 bp Feature: domain Description: AbiEii Location: 749800-750628 bp Feature: gene Location: 750753-751871 bp Feature: gene Location: 751978-753648 bp Ori: ALO49831.1 Feature: domain Description: RVT_N Location: 752032-752275 bp Feature: domain Description: RVT_N Location: 752032-752275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752320-752968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752320-752968 bp Feature: domain Description: GIIM Note: maturase Location: 753022-753253 bp Feature: domain Description: GIIM Note: maturase Location: 753022-753253 bp Feature: gene Location: 754328-759547 bp Feature: domain Description: N6_Mtase Location: 754886-755240 bp Feature: domain Description: N6_Mtase Location: 754886-755240 bp Feature: domain Description: DUF2958 Location: 755663-755930 bp Feature: domain Description: DUF2958 Location: 755663-755930 bp Feature: domain Description: COG4646 Location: 757124-759179 bp Feature: domain Description: COG4646 Location: 7571 24-7591 79 bp Feature: gene Location: 759641-761704 bp Ori: ALO48245.1 Feature: domain Description: PRK07726 Location: 759653-761504 bp Feature: domain Description: PRK07726 Location: 759653-761 504 bp Feature: gene Location: 1689043-1691124 bp Ori: ALO48936.1 Feature: domain Description: PRK07726 Location: 1689055-1690924 bp Feature: domain Description: PRK07726 Location: 1 689055-1 690924 bp Feature: gene Location: 1691216-1696360 bp Feature: domain Description: N6_Mtase Location: 1691531-1692128 bp Feature: domain Description: N6_Mtase Location: 1 691 531 -1 6921 28 bp Feature: domain Description: DUF2958 Location: 1692551-1692818 bp Feature: domain Description: DUF2958 Location: 1 692551 -1 69281 8 bp Feature: domain Description: COG4646 Location: 1693937-1695992 bp Feature: domain Description: COG4646 Location: 1 693937-1 695992 bp Feature: gene Location: 1697040-1698710 bp Ori: ALO49921.1 Feature: domain Description: RVT_N Location: 1697094-1697337 bp Feature: domain Description: RVT_N Location: 1 697094-1 697337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1697382-1698030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 697382-1 698030 bp Feature: domain Description: GIIM Note: maturase Location: 1698084-1698315 bp Feature: domain Description: GIIM Note: maturase Location: 1 698084-1 69831 5 bp Feature: gene Location: 1698816-1699952 bp Feature: gene Location: 1699999-1700952 bp Ori: ALO48937.1 Feature: domain Description: Abi_2 Location: 1700098-1700698 bp Feature: domain Description: Abi_2 Location: 1 700098-1 700698 bp Feature: gene Location: 1703713-1704111 bp Feature: gene Location: 1704098-1704577 bp Feature: gene Location: 1705263-1707446 bp Ori: ALO48942.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1705878-1706331 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 705878-1 706331 bp Feature: gene Location: 1707418-1708911 bp Ori: ALO48943.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1707874-1708408 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 707874-1 708408 bp Feature: gene Location: 1709250-1709558 bp Ori: ALO49922.1 Feature: domain Description: DUF3853 Location: 1709256-1709544 bp Feature: domain Description: DUF3853 Location: 1 709256-1 709544 bp Feature: gene Location: 1709555-1710607 bp Ori: ALO48944.1 Feature: domain Description: AAA_25 Location: 1709675-1710140 bp Feature: domain Description: AAA_25 Location: 1 709675-1 71 01 40 bp Feature: gene Location: 2479683-2481317 bp Ori: ALO49499.1 Feature: domain Description: Cyt_bd_oxida_I Location: 2479731-2481231 bp Feature: domain Description: Cyt_bd_oxida_I Location: 2479731 -2481 231 bp Feature: gene Location: 2481378-2481599 bp Ori: ALO49500.1 Feature: domain Description: DUF4492 Location: 2481405-2481585 bp Feature: domain Description: DUF4492 Location: 2481 405-2481 585 bp Feature: gene Location: 2481823-2483493 bp Ori: ALO49985.1 Feature: domain Description: RVT_N Location: 2481877-2482120 bp Feature: domain Description: RVT_N Location: 2481 877-24821 20 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2482165-2482813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24821 65-248281 3 bp Feature: domain Description: GIIM Note: maturase Location: 2482867-2483098 bp Feature: domain Description: GIIM Note: maturase Location: 2482867-2483098 bp Feature: gene Location: 2484492-2487194 bp Ori: ALO49501.1 Feature: domain Description: OMP_RagA_SusC Location: 2484612-2487189 bp Feature: domain Description: OMP_RagA_SusC Location: 248461 2-24871 89 bp Feature: gene Location: 2487208-2488818 bp Ori: ALO49986.1 Feature: domain Description: SusD Location: 2487466-2488687 bp Feature: domain Description: SusD Location: 2487466-2488687 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), N6_Mtase (pfam02384), DUF2958 (pfam11171), COG4646 (Adenine-specific DNA methylase, N12 class ), PRK07726 (DNA topoisomerase 3), Abi_2 (pfam07751), RVT-UG8
RVT-UG3, DUF3853 (pfam12964), AAA_25 (pfam13481), Cyt_bd_oxida_I (pfam01654), DUF4492 (pfam14899), OMP_RagA_SusC (TIGR04056), SusD (NF033071)