myRT

myRT report for GCA_001449005.1_ASM144900v1

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Seq: CP013102.1 Paraburkholderia caribensis strain MWAP64 chromosome 1, complete sequence (3688127 bp)
Overview 1 RT 1: 2238236-2246832 bp 2 RT 2: 3592311-3599130 bp Neighborhood of RT #1 [2238236, 2246843] ArnT Xcc1710_like RVT_N RVT-GII GIIM HNHc PRK09265 PRK06349 Neighborhood of RT #2 [3592311, 3599282] moaC PglL_A Wzy_C Wzy_C_2 RVT_N RVT-GII YkfC HNHc PilA R_switched_YjbE Feature: gene Location: 2238236-2240053 bp Ori: ALP64147.1 Feature: domain Description: ArnT Location: 2238272-2239946 bp Feature: domain Description: ArnT Location: 2238272-2239946 bp Feature: gene Location: 2240419-2240793 bp Ori: ALP62890.1 Feature: domain Description: Xcc1710_like Location: 2240458-2240782 bp Feature: domain Description: Xcc1 71 0_like Location: 2240458-2240782 bp Feature: gene Location: 2242064-2243764 bp Ori: ALP62891.1 Feature: domain Description: RVT_N Location: 2242121-2242364 bp Feature: domain Description: RVT_N Location: 22421 21 -2242364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2242409-2243057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2242409-2243057 bp Feature: domain Description: GIIM Note: maturase Location: 2243111-2243342 bp Feature: domain Description: GIIM Note: maturase Location: 22431 1 1 -2243342 bp Feature: domain Description: HNHc Note: nucleases Location: 2243570-2243726 bp Feature: domain Description: HNHc Note: nucleases Location: 2243570-2243726 bp Feature: gene Location: 2244206-2245453 bp Ori: ALP62892.1 Feature: domain Description: PRK09265 Location: 2244221-2245439 bp Feature: domain Description: PRK09265 Location: 2244221 -2245439 bp Feature: gene Location: 2245512-2246843 bp Ori: ALP62893.1 Feature: domain Description: PRK06349 Location: 2245515-2246832 bp Feature: domain Description: PRK06349 Location: 224551 5-2246832 bp Feature: gene Location: 3592311-3592787 bp Ori: ALP63908.1 Gene: moaC Feature: domain Description: moaC Location: 3592317-3592782 bp Feature: domain Description: moaC Location: 359231 7-3592782 bp Feature: gene Location: 3592891-3594684 bp Ori: ALP63909.1 Feature: domain Description: PglL_A Location: 3593398-3593470 bp Feature: domain Description: PglL_A Location: 3593398-3593470 bp Feature: domain Description: Wzy_C Location: 3593512-3593980 bp Feature: domain Description: Wzy_C Location: 359351 2-3593980 bp Feature: domain Description: Wzy_C_2 Location: 3594046-3594550 bp Feature: domain Description: Wzy_C_2 Location: 3594046-3594550 bp Feature: gene Location: 3594809-3596515 bp Ori: ALP63910.1 Feature: domain Description: RVT_N Location: 3594866-3595109 bp Feature: domain Description: RVT_N Location: 3594866-35951 09 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3595154-3595802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35951 54-3595802 bp Feature: domain Description: YkfC Location: 3596003-3596150 bp Feature: domain Description: YkfC Location: 3596003-35961 50 bp Feature: domain Description: HNHc Note: nucleases Location: 3596330-3596471 bp Feature: domain Description: HNHc Note: nucleases Location: 3596330-3596471 bp Feature: gene Location: 3597801-3598418 bp Ori: ALP63911.1 Feature: domain Description: PilA Location: 3597915-3598146 bp Feature: domain Description: PilA Location: 359791 5-35981 46 bp Feature: gene Location: 3598557-3599282 bp Ori: ALP63912.1 Feature: domain Description: R_switched_YjbE Location: 3598593-3599130 bp Feature: domain Description: R_switched_YjbE Location: 3598593-35991 30 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArnT (COG1807), Xcc1710_like (cd05560), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK09265 (aminotransferase AlaT; Validated), PRK06349 (homoserine dehydrogenase; Provisional), moaC (TIGR00581), PglL_A (pfam15864)
Wzy_C (pfam04932), Wzy_C_2 (pfam11846), YkfC (COG3344), PilA (COG4969), R_switched_YjbE (TIGR03717)