myRT

myRT report for GCA_001455145.1_ASM145514v1

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Seq: CP013331.1 Fusobacterium hwasookii ChDC F174, complete genome (2463707 bp)
Overview 1 RT 1: 19316-22926 bp 2 RT 2: 1613431-1625729 bp 3 RT 3: 2434776-2439554 bp Neighborhood of RT #1 [19316, 22926] RVT-Retrons Neighborhood of RT #2 [1613431, 1625869] COG2865 YeeA YeeA RVT-UG5 AAA-ATPase_like PDDEXK_9 TIGR02687 Neighborhood of RT #3 [2434776, 2439802] fadh2 MATE_like_8 RVT-Retrons HTH_45 UPRTase Feature: gene Location: 19316-19771 bp Feature: gene Location: 19829-20365 bp Feature: gene Location: 20375-21391 bp Ori: ALQ38994.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20594-21146 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20594-21 1 46 bp Feature: gene Location: 21618-21953 bp Feature: gene Location: 21946-22926 bp Feature: gene Location: 1613431-1614975 bp Ori: ALQ40358.1 Feature: domain Description: COG2865 Location: 1613434-1614970 bp Feature: domain Description: COG2865 Location: 1 61 3434-1 61 4970 bp Feature: gene Location: 1614968-1618588 bp Ori: ALQ40359.1 Feature: domain Description: YeeA Location: 1615580-1617278 bp Feature: domain Description: YeeA Location: 1 61 5580-1 61 7278 bp Feature: domain Description: YeeA Location: 1618052-1618544 bp Feature: domain Description: YeeA Location: 1 61 8052-1 61 8544 bp Feature: gene Location: 1618595-1621609 bp Ori: ALQ40360.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1619183-1619672 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 61 91 83-1 61 9672 bp Feature: gene Location: 1621632-1623260 bp Ori: ALQ40361.1 Feature: domain Description: AAA-ATPase_like Location: 1621647-1622514 bp Feature: domain Description: AAA-ATPase_like Location: 1 621 647-1 62251 4 bp Feature: domain Description: PDDEXK_9 Location: 1622946-1623252 bp Feature: domain Description: PDDEXK_9 Location: 1 622946-1 623252 bp Feature: gene Location: 1623356-1625869 bp Ori: ALQ40362.1 Feature: domain Description: TIGR02687 Location: 1623422-1625729 bp Feature: domain Description: TIGR02687 Location: 1 623422-1 625729 bp Feature: gene Location: 2434776-2435642 bp Ori: ALQ41110.1 Feature: domain Description: fadh2 Location: 2434821-2435622 bp Feature: domain Description: fadh2 Location: 2434821 -2435622 bp Feature: gene Location: 2435846-2437186 bp Ori: ALQ41111.1 Feature: domain Description: MATE_like_8 Location: 2435873-2437178 bp Feature: domain Description: MATE_like_8 Location: 2435873-24371 78 bp Feature: gene Location: 2437298-2438347 bp Ori: ALQ41112.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2437523-2438081 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2437523-2438081 bp Feature: gene Location: 2438613-2438885 bp Ori: ALQ41113.1 Feature: domain Description: HTH_45 Location: 2438685-2438817 bp Feature: domain Description: HTH_45 Location: 2438685-243881 7 bp Feature: gene Location: 2438915-2439802 bp Ori: ALQ41114.1 Feature: domain Description: UPRTase Location: 2439347-2439554 bp Feature: domain Description: UPRTase Location: 2439347-2439554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, COG2865 (Predicted transcriptional regulator, contains HTH domain ), YeeA (COG1002), RVT-UG5, AAA-ATPase_like (pfam09820), PDDEXK_9 (pfam08011), TIGR02687 (TIGR02687 family protein), fadh2 (TIGR00676), MATE_like_8 (cd13134), HTH_45 (pfam14947)
UPRTase (pfam14681)