myRT

myRT report for GCA_001457475.1_NCTC10807

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Seq: LN831029.1 Achromobacter xylosoxidans genome assembly NCTC10807, chromosome : 1 (6813182 bp)
Overview 1 RT 1: 1167220-1177859 bp Neighborhood of RT #1 [1167220, 1177859] RVT-GII GIIM HNH DEXHc_Snf RVT_N RVT-GII GIIM HNHc SF2_C_SNF Feature: gene Location: 1167220-1167480 bp Feature: gene Location: 1167557-1168204 bp Feature: gene Location: 1169334-1170647 bp Ori: CKG95268.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1169337-1169922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 69337-1 1 69922 bp Feature: domain Description: GIIM Note: maturase Location: 1169979-1170210 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 69979-1 1 7021 0 bp Feature: domain Description: HNH Note: nucleases Location: 1170468-1170603 bp Feature: domain Description: HNH Note: nucleases Location: 1 1 70468-1 1 70603 bp Feature: gene Location: 1170796-1171791 bp Feature: gene Location: 1171838-1172164 bp Feature: gene Location: 1172242-1172541 bp Feature: gene Location: 1172654-1173715 bp Ori: CKG95393.1 Feature: domain Description: DEXHc_Snf Location: 1172879-1173146 bp Feature: domain Description: DEXHc_Snf Location: 1 1 72879-1 1 731 46 bp Feature: gene Location: 1174314-1176032 bp Ori: CKG95417.1 Gene: ltrA_2 Feature: domain Description: RVT_N Location: 1174371-1174608 bp Feature: domain Description: RVT_N Location: 1 1 74371 -1 1 74608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1174659-1175307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 74659-1 1 75307 bp Feature: domain Description: GIIM Note: maturase Location: 1175364-1175595 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 75364-1 1 75595 bp Feature: domain Description: HNHc Note: nucleases Location: 1175829-1175985 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 75829-1 1 75985 bp Feature: gene Location: 1176199-1177356 bp Ori: CKG95445.1 Feature: domain Description: SF2_C_SNF Location: 1176814-1177192 bp Feature: domain Description: SF2_C_SNF Location: 1 1 7681 4-1 1 771 92 bp Feature: gene Location: 1177467-1177859 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNH (pfam01844), DEXHc_Snf (cd17919), RVT_N (pfam13655), HNHc (smart00507), SF2_C_SNF (cd18793)