myRT

myRT report for GCA_001477655.1_ASM147765v1

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Seq: CP011266.1 Methanobrevibacter millerae strain SM9, complete genome (2543538 bp)
Overview 1 RT 1: 545035-549268 bp 2 RT 2: 1060312-1066157 bp 3 RT 3: 1294417-1299492 bp 4 RT 4: 1691501-1696521 bp 5 RT 5: 2272836-2278652 bp Neighborhood of RT #1 [545035, 549268] RVT_N RVT-GII GIIM DNA_BRE_C Neighborhood of RT #2 [1060312, 1066168] CcmA ABC2_membrane_4 RVT_N RVT-GII GIIM InsQ Zn_ribbon_2 Neighborhood of RT #3 [1294417, 1299536] HTH_ARSR InsQ InsQ RVT_N RVT-GII GIIM PsbP Neighborhood of RT #4 [1691501, 1696715] Glyco_tranf_GTA_type DDE_Tnp_1 RVT_N RVT-GII GIIM Neighborhood of RT #5 [2272836, 2278687] PRK06279 TM2 RVT_N RVT-GII GIIM InsQ InsQ ACR3 Feature: gene Location: 545035-546528 bp Ori: ALT68222.1 Feature: domain Description: RVT_N Location: 545095-545341 bp Feature: domain Description: RVT_N Location: 545095-545341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 545395-546064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 545395-546064 bp Feature: domain Description: GIIM Note: maturase Location: 546127-546361 bp Feature: domain Description: GIIM Note: maturase Location: 5461 27-546361 bp Feature: gene Location: 547222-548349 bp Ori: ALT68223.1 Feature: domain Description: DNA_BRE_C Location: 547636-548143 bp Feature: domain Description: DNA_BRE_C Location: 547636-5481 43 bp Feature: gene Location: 549095-549268 bp Feature: gene Location: 1060312-1061241 bp Ori: ALT68742.1 Feature: domain Description: CcmA Location: 1060327-1061230 bp Feature: domain Description: CcmA Location: 1 060327-1 061 230 bp Feature: gene Location: 1061253-1061978 bp Ori: ALT68743.1 Feature: domain Description: ABC2_membrane_4 Location: 1061268-1061766 bp Feature: domain Description: ABC2_membrane_4 Location: 1 061 268-1 061 766 bp Feature: gene Location: 1062189-1063682 bp Ori: ALT68744.1 Feature: domain Description: RVT_N Location: 1062249-1062495 bp Feature: domain Description: RVT_N Location: 1 062249-1 062495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1062549-1063218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 062549-1 06321 8 bp Feature: domain Description: GIIM Note: maturase Location: 1063281-1063515 bp Feature: domain Description: GIIM Note: maturase Location: 1 063281 -1 06351 5 bp Feature: gene Location: 1064577-1065833 bp Ori: ALT68745.1 Feature: domain Description: InsQ Location: 1064631-1065729 bp Feature: domain Description: InsQ Location: 1 064631 -1 065729 bp Feature: gene Location: 1065959-1066168 bp Ori: ALT68746.1 Feature: domain Description: Zn_ribbon_2 Location: 1065971-1066157 bp Feature: domain Description: Zn_ribbon_2 Location: 1 065971 -1 0661 57 bp Feature: gene Location: 1294417-1294677 bp Ori: ALT68951.1 Feature: domain Description: HTH_ARSR Location: 1294468-1294672 bp Feature: domain Description: HTH_ARSR Location: 1 294468-1 294672 bp Feature: gene Location: 1294791-1295936 bp Ori: ALT68952.1 Feature: domain Description: InsQ Location: 1294815-1295625 bp Feature: domain Description: InsQ Location: 1 29481 5-1 295625 bp Feature: domain Description: InsQ Location: 1295679-1295898 bp Feature: domain Description: InsQ Location: 1 295679-1 295898 bp Feature: gene Location: 1296760-1298253 bp Ori: ALT68953.1 Feature: domain Description: RVT_N Location: 1296820-1297066 bp Feature: domain Description: RVT_N Location: 1 296820-1 297066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1297120-1297789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2971 20-1 297789 bp Feature: domain Description: GIIM Note: maturase Location: 1297852-1298086 bp Feature: domain Description: GIIM Note: maturase Location: 1 297852-1 298086 bp Feature: gene Location: 1298709-1299074 bp Feature: gene Location: 1299180-1299536 bp Ori: ALT68955.1 Feature: domain Description: PsbP Location: 1299294-1299492 bp Feature: domain Description: PsbP Location: 1 299294-1 299492 bp Feature: gene Location: 1691501-1692532 bp Ori: ALT69293.1 Feature: domain Description: Glyco_tranf_GTA_type Location: 1691522-1692116 bp Feature: domain Description: Glyco_tranf_GTA_type Location: 1 691 522-1 6921 1 6 bp Feature: gene Location: 1692798-1693856 bp Ori: ALT69294.1 Feature: domain Description: DDE_Tnp_1 Location: 1693155-1693779 bp Feature: domain Description: DDE_Tnp_1 Location: 1 6931 55-1 693779 bp Feature: gene Location: 1695195-1696715 bp Ori: ALT69295.1 Feature: domain Description: RVT_N Location: 1695255-1695501 bp Feature: domain Description: RVT_N Location: 1 695255-1 695501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1695555-1696224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 695555-1 696224 bp Feature: domain Description: GIIM Note: maturase Location: 1696287-1696521 bp Feature: domain Description: GIIM Note: maturase Location: 1 696287-1 696521 bp Feature: gene Location: 2272836-2273150 bp Ori: ALT69848.1 Gene: ehbA Feature: domain Description: PRK06279 Location: 2272848-2273148 bp Feature: domain Description: PRK06279 Location: 2272848-22731 48 bp Feature: gene Location: 2273530-2273748 bp Ori: ALT69849.1 Feature: domain Description: TM2 Location: 2273545-2273668 bp Feature: domain Description: TM2 Location: 2273545-2273668 bp Feature: gene Location: 2274452-2275942 bp Ori: ALT69850.1 Feature: domain Description: RVT_N Location: 2274509-2274749 bp Feature: domain Description: RVT_N Location: 2274509-2274749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2274809-2275478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2274809-2275478 bp Feature: domain Description: GIIM Note: maturase Location: 2275541-2275775 bp Feature: domain Description: GIIM Note: maturase Location: 2275541 -2275775 bp Feature: gene Location: 2276405-2277544 bp Ori: ALT69851.1 Feature: domain Description: InsQ Location: 2276429-2277239 bp Feature: domain Description: InsQ Location: 2276429-2277239 bp Feature: domain Description: InsQ Location: 2277293-2277512 bp Feature: domain Description: InsQ Location: 2277293-227751 2 bp Feature: gene Location: 2277719-2278687 bp Ori: ALT69852.1 Feature: domain Description: ACR3 Location: 2277725-2278652 bp Feature: domain Description: ACR3 Location: 2277725-2278652 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DNA_BRE_C (cl00213), CcmA (COG4133), ABC2_membrane_4 (pfam12730), InsQ (COG0675), Zn_ribbon_2 (pfam12674), HTH_ARSR (smart00418), PsbP (pfam01789)
Glyco_tranf_GTA_type (cl11394), DDE_Tnp_1 (pfam01609), PRK06279 (putative monovalent cation/H+ antiporter subunit E; Reviewed), TM2 (pfam05154), ACR3 (COG0798)