myRT

myRT report for GCA_001482345.1_ASM148234v1

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Seq: CP013712.1 Klebsiella pneumoniae strain J1 plasmid 1, complete sequence (74973 bp)
Overview 1 RT 1: 38317-45247 bp Neighborhood of RT #1 [38317, 45249] Phage_holin_2_1 DDE_Tnp_1_5 RVT-GII GIIM LysR ChaC Feature: gene Location: 38317-38532 bp Ori: ALU57061.1 Feature: domain Description: Phage_holin_2_1 Location: 38332-38518 bp Feature: domain Description: Phage_holin_2_1 Location: 38332-3851 8 bp Feature: gene Location: 39727-40650 bp Ori: ALU57090.1 Feature: domain Description: DDE_Tnp_1_5 Location: 39784-40117 bp Feature: domain Description: DDE_Tnp_1 _5 Location: 39784-401 1 7 bp Feature: gene Location: 40952-42283 bp Ori: ALU57062.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41258-41852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 258-41 852 bp Feature: domain Description: GIIM Note: maturase Location: 41903-42125 bp Feature: domain Description: GIIM Note: maturase Location: 41 903-421 25 bp Feature: gene Location: 43557-44432 bp Ori: ALU57063.1 Feature: domain Description: LysR Location: 43569-44427 bp Feature: domain Description: LysR Location: 43569-44427 bp Feature: gene Location: 44608-45249 bp Feature: domain Description: ChaC Location: 44728-45247 bp Feature: domain Description: ChaC Location: 44728-45247 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_holin_2_1 (pfam04971), DDE_Tnp_1_5 (pfam13737), RVT-GII, GIIM (pfam08388), LysR (COG0583), ChaC (pfam04752)

Seq: CP013711.1 Klebsiella pneumoniae strain J1, complete genome (5278493 bp)
Overview 1 RT 1: 234703-239010 bp Neighborhood of RT #1 [234703, 239010] RVT-UG3 RVT-UG8 DDE_Tnp_1_5 Feature: gene Location: 234703-235986 bp Ori: ALU52200.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 234991-235498 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 2 34991-2 35498 bp Feature: gene Location: 236376-237314 bp Ori: ALU52201.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 236502-236949 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2 36502 -2 36949 bp Feature: gene Location: 237360-238283 bp Ori: ALU56824.1 Feature: domain Description: DDE_Tnp_1_5 Location: 237417-237750 bp Feature: domain Description: DDE_Tnp_1_5 Location: 2 37417-2 37750 bp Feature: gene Location: 238435-239010 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG3, RVT-UG8, DDE_Tnp_1_5 (pfam13737)