myRT

myRT report for GCA_001483385.1_ASM148338v1

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Seq: CP013671.1 Tenacibaculum dicentrarchi strain AY7486TD, complete genome (2918253 bp)
Overview 1 RT 1: 917150-925480 bp 2 RT 2: 1395381-1403034 bp 3 RT 3: 1783921-1790962 bp 4 RT 4: 1793448-1810551 bp Neighborhood of RT #1 [917150, 925488] WGR_DNA_ligase SWIM RVT-Retrons fabG RhaT Neighborhood of RT #2 [1395381, 1403084] PLN02856 glyA RVT-UG2 LPLAT_ABO13168-like Neighborhood of RT #3 [1783921, 1791147] DNA_methylase RVT-GII GIIM PhdYeFM_antitox YoeB_toxin RVT-GII GIIM Neighborhood of RT #4 [1793448, 1810551] RVT-GII GIIM Gp49 HTH_XRE RVT-GII GIIM AAA_21 RloB RVT-GII GIIM HigB HigA RVT-GII GIIM RVT-GII GIIM Feature: gene Location: 917150-920176 bp Ori: ALU74515.1 Feature: domain Description: WGR_DNA_ligase Location: 917168-917384 bp Feature: domain Description: WGR_DNA_ligase Location: 91 71 68-91 7384 bp Feature: gene Location: 920191-921822 bp Ori: ALU74516.1 Feature: domain Description: SWIM Location: 921700-921793 bp Feature: domain Description: SWIM Location: 921 700-921 793 bp Feature: gene Location: 922080-923618 bp Ori: ALU74517.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 922629-923247 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 922629-923247 bp Feature: gene Location: 923697-924413 bp Ori: ALU74518.1 Gene: fabG Feature: domain Description: fabG Location: 923700-924411 bp Feature: domain Description: fabG Location: 923700-92441 1 bp Feature: gene Location: 924577-925488 bp Ori: ALU74519.1 Feature: domain Description: RhaT Location: 924589-925480 bp Feature: domain Description: RhaT Location: 924589-925480 bp Feature: gene Location: 1395381-1396664 bp Ori: ALU74864.1 Feature: domain Description: PLN02856 Location: 1395411-1396656 bp Feature: domain Description: PLN02856 Location: 1 39541 1 -1 396656 bp Feature: gene Location: 1396908-1398182 bp Ori: ALU76118.1 Gene: glyA Feature: domain Description: glyA Location: 1396914-1398162 bp Feature: domain Description: glyA Location: 1 39691 4-1 3981 62 bp Feature: gene Location: 1399586-1401091 bp Ori: ALU74865.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1399847-1400723 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 399847-1 400723 bp Feature: gene Location: 1401562-1402272 bp Feature: gene Location: 1402533-1403084 bp Ori: ALU74867.1 Feature: domain Description: LPLAT_ABO13168-like Location: 1402554-1403034 bp Feature: domain Description: LPLAT_ABO1 31 68-like Location: 1 402554-1 403034 bp Feature: gene Location: 1783921-1785195 bp Ori: ALU75152.1 Feature: domain Description: DNA_methylase Location: 1783936-1785166 bp Feature: domain Description: DNA_methylase Location: 1 783936-1 7851 66 bp Feature: gene Location: 1785222-1786106 bp Feature: gene Location: 1786874-1788154 bp Ori: ALU75154.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1787069-1787684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 787069-1 787684 bp Feature: domain Description: GIIM Note: maturase Location: 1787756-1787969 bp Feature: domain Description: GIIM Note: maturase Location: 1 787756-1 787969 bp Feature: gene Location: 1789258-1789512 bp Ori: ALU75155.1 Feature: domain Description: PhdYeFM_antitox Location: 1789261-1789477 bp Feature: domain Description: PhdYeFM_antitox Location: 1 789261 -1 789477 bp Feature: gene Location: 1789514-1789771 bp Ori: ALU75156.1 Feature: domain Description: YoeB_toxin Location: 1789529-1789766 bp Feature: domain Description: YoeB_toxin Location: 1 789529-1 789766 bp Feature: gene Location: 1789867-1791147 bp Ori: ALU75157.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1790062-1790677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 790062-1 790677 bp Feature: domain Description: GIIM Note: maturase Location: 1790749-1790962 bp Feature: domain Description: GIIM Note: maturase Location: 1 790749-1 790962 bp Feature: gene Location: 1793448-1794728 bp Ori: ALU75158.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1793643-1794258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 793643-1 794258 bp Feature: domain Description: GIIM Note: maturase Location: 1794330-1794543 bp Feature: domain Description: GIIM Note: maturase Location: 1 794330-1 794543 bp Feature: gene Location: 1795430-1795786 bp Ori: ALU75159.1 Feature: domain Description: Gp49 Location: 1795478-1795748 bp Feature: domain Description: Gp49 Location: 1 795478-1 795748 bp Feature: gene Location: 1795776-1796066 bp Ori: ALU75160.1 Feature: domain Description: HTH_XRE Location: 1795884-1796022 bp Feature: domain Description: HTH_XRE Location: 1 795884-1 796022 bp Feature: gene Location: 1796165-1797445 bp Ori: ALU75161.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1796360-1796975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 796360-1 796975 bp Feature: domain Description: GIIM Note: maturase Location: 1797050-1797260 bp Feature: domain Description: GIIM Note: maturase Location: 1 797050-1 797260 bp Feature: gene Location: 1798174-1799472 bp Ori: ALU75162.1 Feature: domain Description: AAA_21 Location: 1798309-1799278 bp Feature: domain Description: AAA_21 Location: 1 798309-1 799278 bp Feature: gene Location: 1799478-1800116 bp Ori: ALU75163.1 Feature: domain Description: RloB Location: 1799529-1800075 bp Feature: domain Description: RloB Location: 1 799529-1 800075 bp Feature: gene Location: 1800803-1802083 bp Ori: ALU75164.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1800998-1801613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 800998-1 801 61 3 bp Feature: domain Description: GIIM Note: maturase Location: 1801685-1801898 bp Feature: domain Description: GIIM Note: maturase Location: 1 801 685-1 801 898 bp Feature: gene Location: 1802773-1803069 bp Ori: ALU75165.1 Feature: domain Description: HigB Location: 1802782-1803061 bp Feature: domain Description: HigB Location: 1 802782-1 803061 bp Feature: gene Location: 1803085-1803462 bp Ori: ALU75166.1 Feature: domain Description: HigA Location: 1803091-1803433 bp Feature: domain Description: HigA Location: 1 803091 -1 803433 bp Feature: gene Location: 1803551-1804831 bp Ori: ALU75167.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1803746-1804361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 803746-1 804361 bp Feature: domain Description: GIIM Note: maturase Location: 1804433-1804646 bp Feature: domain Description: GIIM Note: maturase Location: 1 804433-1 804646 bp Feature: gene Location: 1805593-1806900 bp Feature: gene Location: 1806913-1807392 bp Feature: gene Location: 1807499-1808779 bp Ori: ALU75170.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1807694-1808309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 807694-1 808309 bp Feature: domain Description: GIIM Note: maturase Location: 1808381-1808594 bp Feature: domain Description: GIIM Note: maturase Location: 1 808381 -1 808594 bp Feature: gene Location: 1809405-1809950 bp Feature: gene Location: 1809925-1810551 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WGR_DNA_ligase (cd07998), SWIM (pfam04434), RVT-Retrons, fabG (PRK12825), RhaT (TIGR00776), PLN02856 (fumarylacetoacetase), glyA (PRK00011), RVT-UG2, LPLAT_ABO13168-like (cd07988), DNA_methylase (pfam00145)
RVT-GII, GIIM (pfam08388), PhdYeFM_antitox (pfam02604), YoeB_toxin (pfam06769), Gp49 (pfam05973), HTH_XRE (smart00530), AAA_21 (pfam13304), RloB (pfam13707), HigB (COG4680), HigA (COG5499)