myRT

myRT report for GCA_001513635.1_ASM151363v1

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Seq: CP013835.1 Escherichia coli strain JJ2434, complete genome (5128614 bp)
Overview 1 RT 1: 1343983-1350837 bp 2 RT 2: 4472224-4477104 bp Neighborhood of RT #1 [1343983, 1350837] PRK11388 RVT-Retrons Neighborhood of RT #2 [4472224, 4477104] Phage_GPA RVT-Retrons Feature: gene Location: 1343983-1345902 bp Ori: ALX57170.1 Feature: domain Description: PRK11388 Location: 1343986-1345894 bp Feature: domain Description: PRK1 1 388 Location: 1 343986-1 345894 bp Feature: gene Location: 1345939-1346169 bp Feature: gene Location: 1347194-1348951 bp Ori: ALX57172.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1347338-1347956 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 347338-1 347956 bp Feature: gene Location: 1349198-1350325 bp Feature: gene Location: 1350322-1350837 bp Feature: gene Location: 4472224-4474512 bp Ori: ALX60027.1 Feature: domain Description: Phage_GPA Location: 4472623-4473610 bp Feature: domain Description: Phage_GPA Location: 4472623-447361 0 bp Feature: gene Location: 4474783-4475076 bp Feature: gene Location: 4475399-4476349 bp Ori: ALX60029.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4475579-4476122 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4475579-44761 22 bp Feature: gene Location: 4476474-4476911 bp Feature: gene Location: 4476910-4477104 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11388 (DNA-binding transcriptional regulator DhaR; Provisional), RVT-Retrons, Phage_GPA (pfam05840)