myRT

myRT report for GCA_001522105.2_ASM152210v2

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Seq: CP013357.1 Burkholderia oklahomensis EO147 chromosome 1, complete sequence (4192894 bp)
Overview 1 RT 1: 3235293-3239911 bp Neighborhood of RT #1 [3235293, 3240033] PRK06526 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII TnpB_IS66 InsE Feature: gene Location: 3235293-3235652 bp Feature: domain Description: PRK06526 Location: 3235296-3235539 bp Feature: domain Description: PRK06526 Location: 3235296-3235539 bp Feature: gene Location: 3235796-3237343 bp Ori: AOI43240.1 Feature: domain Description: LZ_Tnp_IS66 Location: 3235898-3236114 bp Feature: domain Description: LZ_Tnp_IS66 Location: 3235898-32361 1 4 bp Feature: domain Description: zf-IS66 Location: 3236138-3236261 bp Feature: domain Description: zf-IS66 Location: 32361 38-3236261 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3236309-3237164 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3236309-32371 64 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3237185-3237296 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 32371 85-3237296 bp Feature: gene Location: 3237486-3238967 bp Ori: AOI43241.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3237897-3238587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3237897-3238587 bp Feature: gene Location: 3239297-3239629 bp Ori: AOI43242.1 Feature: domain Description: TnpB_IS66 Location: 3239324-3239612 bp Feature: domain Description: TnpB_IS66 Location: 3239324-323961 2 bp Feature: gene Location: 3239626-3240033 bp Ori: AOI44260.1 Feature: domain Description: InsE Location: 3239671-3239911 bp Feature: domain Description: InsE Location: 3239671 -323991 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06526 (transposase; Provisional), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, TnpB_IS66 (pfam05717), InsE (COG2963)