myRT

myRT report for GCA_001522135.2_ASM152213v2

Download annotations/find similar RTs

Seq: CP013358.1 Burkholderia oklahomensis C6786 chromosome 1, complete sequence (4131753 bp)
Overview 1 RT 1: 3185224-3189842 bp Neighborhood of RT #1 [3185224, 3189964] PRK06526 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII TnpB_IS66 InsE Feature: gene Location: 3185224-3185583 bp Feature: domain Description: PRK06526 Location: 3185227-3185470 bp Feature: domain Description: PRK06526 Location: 31 85227-31 85470 bp Feature: gene Location: 3185727-3187274 bp Ori: AOI46810.1 Feature: domain Description: LZ_Tnp_IS66 Location: 3185829-3186045 bp Feature: domain Description: LZ_Tnp_IS66 Location: 31 85829-31 86045 bp Feature: domain Description: zf-IS66 Location: 3186069-3186192 bp Feature: domain Description: zf-IS66 Location: 31 86069-31 861 92 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3186240-3187095 bp Feature: domain Description: DDE_Tnp_IS66 Location: 31 86240-31 87095 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3187116-3187227 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 31 871 1 6-31 87227 bp Feature: gene Location: 3187417-3188898 bp Ori: AOI46811.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3187828-3188518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 87828-31 8851 8 bp Feature: gene Location: 3189228-3189560 bp Ori: AOI46812.1 Feature: domain Description: TnpB_IS66 Location: 3189255-3189543 bp Feature: domain Description: TnpB_IS66 Location: 31 89255-31 89543 bp Feature: gene Location: 3189557-3189964 bp Ori: AOI46813.1 Feature: domain Description: InsE Location: 3189602-3189842 bp Feature: domain Description: InsE Location: 31 89602-31 89842 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06526 (transposase; Provisional), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, TnpB_IS66 (pfam05717), InsE (COG2963)