myRT

myRT report for GCA_001522635.2_ASM152263v2

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Seq: CP013389.1 Burkholderia sp. BDU8 chromosome 1, complete sequence (4439942 bp)
Overview 1 RT 1: 2414532-2419415 bp 2 RT 2: 2430008-2434850 bp Neighborhood of RT #1 [2414532, 2419415] InsE TnpB_IS66 RVT-GII GIIM DDE_Tnp_IS66 DDE_Tnp_IS66_C Neighborhood of RT #2 [2430008, 2435014] PHA02517 RVT-GII HrpE_YscL_not Feature: gene Location: 2414532-2414975 bp Ori: AOJ11909.1 Feature: domain Description: InsE Location: 2414625-2414823 bp Feature: domain Description: InsE Location: 241 4625-241 4823 bp Feature: gene Location: 2414972-2415307 bp Ori: AOJ10136.1 Feature: domain Description: TnpB_IS66 Location: 2414990-2415275 bp Feature: domain Description: TnpB_IS66 Location: 241 4990-241 5275 bp Feature: gene Location: 2415962-2417089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2416031-2416688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241 6031 -241 6688 bp Feature: domain Description: GIIM Note: maturase Location: 2416766-2416982 bp Feature: domain Description: GIIM Note: maturase Location: 241 6766-241 6982 bp Feature: gene Location: 2417147-2418133 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2417153-2417948 bp Feature: domain Description: DDE_Tnp_IS66 Location: 241 71 53-241 7948 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2417972-2418080 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 241 7972-241 8080 bp Feature: gene Location: 2419077-2419415 bp Feature: gene Location: 2430008-2430898 bp Ori: AOJ10146.1 Feature: domain Description: PHA02517 Location: 2430074-2430875 bp Feature: domain Description: PHA0251 7 Location: 2430074-2430875 bp Feature: gene Location: 2431079-2431234 bp Feature: gene Location: 2431705-2433195 bp Ori: AOJ11911.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2432113-2432803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24321 1 3-2432803 bp Feature: gene Location: 2434165-2434371 bp Feature: gene Location: 2434334-2435014 bp Ori: AOJ10148.1 Feature: domain Description: HrpE_YscL_not Location: 2434394-2434850 bp Feature: domain Description: HrpE_YscL_not Location: 2434394-2434850 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), TnpB_IS66 (pfam05717), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), PHA02517 (putative transposase OrfB; Reviewed), HrpE_YscL_not (TIGR02499)