myRT

myRT report for GCA_001524645.2_ASM152464v2

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Seq: CP013426.1 Burkholderia sp. MSMB0856 plasmid pMSMB0856, complete sequence (249331 bp)
Overview 1 RT 1: 152103-159654 bp Neighborhood of RT #1 [152103, 159791] YadA_head Hia YadA_head YadA_head YadA_stalk YadA_head YadA_stalk YadA_anchor HTH_Tnp_1 RVT-GII GIIM IstB_IS21_ATP IstB_IS21 COG4584 COG4584 Feature: gene Location: 152103-153578 bp Ori: AOJ85338.1 Feature: domain Description: YadA_head Location: 152160-152235 bp Feature: domain Description: YadA_head Location: 1 521 60-1 52235 bp Feature: domain Description: Hia Location: 152235-152409 bp Feature: domain Description: Hia Location: 1 52235-1 52409 bp Feature: domain Description: YadA_head Location: 152412-152490 bp Feature: domain Description: YadA_head Location: 1 5241 2-1 52490 bp Feature: domain Description: YadA_head Location: 152496-152574 bp Feature: domain Description: YadA_head Location: 1 52496-1 52574 bp Feature: domain Description: YadA_stalk Location: 152697-152826 bp Feature: domain Description: YadA_stalk Location: 1 52697-1 52826 bp Feature: domain Description: YadA_head Location: 153126-153159 bp Feature: domain Description: YadA_head Location: 1 531 26-1 531 59 bp Feature: domain Description: YadA_stalk Location: 153216-153333 bp Feature: domain Description: YadA_stalk Location: 1 5321 6-1 53333 bp Feature: domain Description: YadA_anchor Location: 153402-153576 bp Feature: domain Description: YadA_anchor Location: 1 53402-1 53576 bp Feature: gene Location: 154791-154943 bp Ori: AOJ85281.1 Feature: domain Description: HTH_Tnp_1 Location: 154797-154908 bp Feature: domain Description: HTH_Tnp_1 Location: 1 54797-1 54908 bp Feature: gene Location: 156190-157374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 156226-156868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 56226-1 56868 bp Feature: domain Description: GIIM Note: maturase Location: 156919-157153 bp Feature: domain Description: GIIM Note: maturase Location: 1 5691 9-1 571 53 bp Feature: gene Location: 157477-158226 bp Ori: AOJ85282.1 Feature: domain Description: IstB_IS21_ATP Location: 157549-157633 bp Feature: domain Description: IstB_IS21 _ATP Location: 1 57549-1 57633 bp Feature: domain Description: IstB_IS21 Location: 157639-158167 bp Feature: domain Description: IstB_IS21 Location: 1 57639-1 581 67 bp Feature: gene Location: 158241-159791 bp Ori: AOJ85283.1 Feature: domain Description: COG4584 Location: 158376-159102 bp Feature: domain Description: COG4584 Location: 1 58376-1 591 02 bp Feature: domain Description: COG4584 Location: 159192-159654 bp Feature: domain Description: COG4584 Location: 1 591 92-1 59654 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YadA_head (pfam05658), Hia (COG5295), YadA_stalk (pfam05662), YadA_anchor (pfam03895), HTH_Tnp_1 (pfam01527), RVT-GII, GIIM (pfam08388), IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), COG4584 (Transposase )