myRT

myRT report for GCA_001543345.1_ASM154334v1

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Seq: CP013476.1 Turicibacter sp. H121, complete genome (2622031 bp)
Overview 1 RT 1: 751041-756534 bp 2 RT 2: 779885-783540 bp 3 RT 3: 2435497-2441298 bp Neighborhood of RT #1 [751041, 756566] GIY-YIG_HE_Tlr8p_PBC-V_like PRK09263 RVT-GII HNHc PRK09263 Sulf_transp Neighborhood of RT #2 [779885, 783548] GIIM RVT-GII IS285 PHA02517 Neighborhood of RT #3 [2435497, 2441384] PTS-II-BC-unk1 RgfB-like RVT-GII GIIM HNH_3 HNH_3 Yae1_N Feature: gene Location: 751041-751796 bp Ori: AMC08126.1 Feature: domain Description: GIY-YIG_HE_Tlr8p_PBC-V_like Location: 751047-751323 bp Feature: domain Description: GIY-YIG_HE_Tlr8p_PBC-V_like Location: 751 047-751 323 bp Feature: gene Location: 752053-752409 bp Ori: AMC08127.1 Feature: domain Description: PRK09263 Location: 752059-752407 bp Feature: domain Description: PRK09263 Location: 752059-752407 bp Feature: gene Location: 752513-754519 bp Ori: AMC08128.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752837-753611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752837-75361 1 bp Feature: domain Description: HNHc Note: nucleases Location: 754253-754361 bp Feature: domain Description: HNHc Note: nucleases Location: 754253-754361 bp Feature: gene Location: 755210-755761 bp Ori: AMC08129.1 Feature: domain Description: PRK09263 Location: 755240-755735 bp Feature: domain Description: PRK09263 Location: 755240-755735 bp Feature: gene Location: 756006-756566 bp Ori: AMC08130.1 Feature: domain Description: Sulf_transp Location: 756096-756534 bp Feature: domain Description: Sulf_transp Location: 756096-756534 bp Feature: gene Location: 779885-780412 bp Feature: gene Location: 780481-780873 bp Ori: AMC08151.1 Feature: domain Description: GIIM Note: maturase Location: 780487-780712 bp Feature: domain Description: GIIM Note: maturase Location: 780487-78071 2 bp Feature: gene Location: 780883-781392 bp Ori: AMC08152.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 780904-781342 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 780904-781 342 bp Feature: gene Location: 781396-781668 bp Ori: AMC08153.1 Feature: domain Description: IS285 Location: 781405-781624 bp Feature: domain Description: IS285 Location: 781 405-781 624 bp Feature: gene Location: 782715-783548 bp Ori: AMC08154.1 Feature: domain Description: PHA02517 Location: 782772-783540 bp Feature: domain Description: PHA0251 7 Location: 782772-783540 bp Feature: gene Location: 2435497-2437152 bp Ori: AMC09497.1 Feature: domain Description: PTS-II-BC-unk1 Location: 2435518-2437147 bp Feature: domain Description: PTS-II-BC-unk1 Location: 243551 8-24371 47 bp Feature: gene Location: 2437163-2437957 bp Ori: AMC09498.1 Feature: domain Description: RgfB-like Location: 2437172-2437943 bp Feature: domain Description: RgfB-like Location: 24371 72-2437943 bp Feature: gene Location: 2438653-2439930 bp Ori: AMC09499.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2438863-2439478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2438863-2439478 bp Feature: domain Description: GIIM Note: maturase Location: 2439541-2439769 bp Feature: domain Description: GIIM Note: maturase Location: 2439541 -2439769 bp Feature: gene Location: 2440018-2440680 bp Ori: AMC09500.1 Feature: domain Description: HNH_3 Location: 2440267-2440354 bp Feature: domain Description: HNH_3 Location: 2440267-2440354 bp Feature: domain Description: HNH_3 Location: 2440585-2440645 bp Feature: domain Description: HNH_3 Location: 2440585-2440645 bp Feature: gene Location: 2440875-2441384 bp Ori: AMC09501.1 Feature: domain Description: Yae1_N Location: 2441217-2441298 bp Feature: domain Description: Yae1 _N Location: 2441 21 7-2441 298 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIY-YIG_HE_Tlr8p_PBC-V_like (cd10443), PRK09263 (anaerobic ribonucleoside triphosphate reductase; Provisional), RVT-GII, HNHc (smart00507), Sulf_transp (pfam04143), GIIM (pfam08388), IS285 (COG3328), PHA02517 (putative transposase OrfB; Reviewed), PTS-II-BC-unk1 (TIGR02003), RgfB-like (cd09079)
HNH_3 (pfam13392), Yae1_N (pfam09811)