myRT

myRT report for GCA_001548175.1_ASM154817v1

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Seq: AP014866.1 Bacillus thuringiensis serovar tolworthi plasmid pKK2 DNA, complete genome, strain: Pasteur Institute Standard strain (293217 bp)
Overview 1 RT 1: 37346-50190 bp 2 RT 2: 77872-82203 bp 3 RT 3: 88207-100156 bp 4 RT 4: 113289-118111 bp 5 RT 5: 212781-219444 bp 6 RT 6: 281315-288496 bp Neighborhood of RT #1 [37346, 50190] Ftsk_gamma RVT-GII GIIM HNHc RVT-GII HNHc RVT-GII Intron_maturas2 HNHc Neighborhood of RT #2 [77872, 82232] RVT-GII HNHc LPD1 DUF3854 Neighborhood of RT #3 [88207, 100156] TrbL CwlT_like RVT-GII HNHc CwlT_like RVT-GII Intron_maturas2 HNHc NlpD Spr Neighborhood of RT #4 [113289, 118392] DDE_Tnp_1 RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #5 [212781, 219458] PinE HNHc RVT-GII GIIM RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #6 [281315, 288496] KOG1000 KOG1000 RVT-GII GIIM Feature: gene Location: 37346-38119 bp Feature: gene Location: 38387-40069 bp Ori: BAR87414.1 Feature: domain Description: Ftsk_gamma Location: 39014-39194 bp Feature: domain Description: Ftsk_gamma Location: 3901 4-391 94 bp Feature: gene Location: 40410-42284 bp Ori: BAR87415.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40710-41415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4071 0-41 41 5 bp Feature: domain Description: GIIM Note: maturase Location: 41529-41697 bp Feature: domain Description: GIIM Note: maturase Location: 41 529-41 697 bp Feature: domain Description: HNHc Note: nucleases Location: 42045-42210 bp Feature: domain Description: HNHc Note: nucleases Location: 42045-4221 0 bp Feature: gene Location: 42957-43394 bp Feature: gene Location: 43460-45250 bp Ori: BAR87417.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43757-44453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43757-44453 bp Feature: domain Description: HNHc Note: nucleases Location: 44993-45125 bp Feature: domain Description: HNHc Note: nucleases Location: 44993-451 25 bp Feature: gene Location: 45932-46078 bp Feature: gene Location: 46217-48040 bp Ori: BAR87419.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46487-47315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46487-4731 5 bp Feature: domain Description: Intron_maturas2 Location: 47387-47705 bp Feature: domain Description: Intron_maturas2 Location: 47387-47705 bp Feature: domain Description: HNHc Note: nucleases Location: 47858-48011 bp Feature: domain Description: HNHc Note: nucleases Location: 47858-4801 1 bp Feature: gene Location: 48641-49786 bp Feature: gene Location: 49804-50190 bp Feature: gene Location: 77872-78090 bp Feature: gene Location: 77978-78232 bp Feature: gene Location: 78264-80060 bp Ori: BAR87451.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78558-79254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78558-79254 bp Feature: domain Description: HNHc Note: nucleases Location: 79854-79929 bp Feature: domain Description: HNHc Note: nucleases Location: 79854-79929 bp Feature: gene Location: 80189-80929 bp Ori: BAR87452.1 Feature: domain Description: LPD1 Location: 80678-80873 bp Feature: domain Description: LPD1 Location: 80678-80873 bp Feature: gene Location: 80919-82232 bp Ori: BAR87453.1 Feature: domain Description: DUF3854 Location: 81864-82203 bp Feature: domain Description: DUF3854 Location: 81 864-82203 bp Feature: gene Location: 88207-92226 bp Ori: BAR87462.1 Feature: domain Description: TrbL Location: 88486-88984 bp Feature: domain Description: TrbL Location: 88486-88984 bp Feature: gene Location: 92223-93218 bp Ori: BAR87463.1 Feature: domain Description: CwlT_like Location: 93072-93195 bp Feature: domain Description: CwlT_like Location: 93072-931 95 bp Feature: gene Location: 93892-95697 bp Ori: BAR87464.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94186-94882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 941 86-94882 bp Feature: domain Description: HNHc Note: nucleases Location: 95443-95581 bp Feature: domain Description: HNHc Note: nucleases Location: 95443-95581 bp Feature: gene Location: 95813-96130 bp Ori: BAR87465.1 Feature: domain Description: CwlT_like Location: 95855-96119 bp Feature: domain Description: CwlT_like Location: 95855-961 1 9 bp Feature: gene Location: 96706-98529 bp Ori: BAR87466.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96970-97804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96970-97804 bp Feature: domain Description: Intron_maturas2 Location: 97873-98212 bp Feature: domain Description: Intron_maturas2 Location: 97873-9821 2 bp Feature: domain Description: HNHc Note: nucleases Location: 98350-98506 bp Feature: domain Description: HNHc Note: nucleases Location: 98350-98506 bp Feature: gene Location: 98689-99564 bp Ori: BAR87467.1 Feature: domain Description: NlpD Location: 98704-99133 bp Feature: domain Description: NlpD Location: 98704-991 33 bp Feature: domain Description: Spr Location: 99169-99505 bp Feature: domain Description: Spr Location: 991 69-99505 bp Feature: gene Location: 99581-100156 bp Feature: gene Location: 113289-114347 bp Ori: BAR87483.1 Feature: domain Description: DDE_Tnp_1 Location: 113649-114333 bp Feature: domain Description: DDE_Tnp_1 Location: 1 1 3649-1 1 4333 bp Feature: gene Location: 114499-114678 bp Feature: gene Location: 114852-116159 bp Ori: BAR87485.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115137-115776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 51 37-1 1 5776 bp Feature: domain Description: GIIM Note: maturase Location: 115851-116076 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 5851 -1 1 6076 bp Feature: gene Location: 116426-116689 bp Feature: gene Location: 116956-118392 bp Ori: BAR87487.1 Feature: domain Description: DDE_Tnp_1 Location: 117313-118111 bp Feature: domain Description: DDE_Tnp_1 Location: 1 1 731 3-1 1 81 1 1 bp Feature: gene Location: 212781-213584 bp Ori: BAR87581.1 Feature: domain Description: PinE Location: 212787-213279 bp Feature: domain Description: PinE Location: 21 2787-21 3279 bp Feature: gene Location: 213720-214094 bp Ori: BAR87582.1 Feature: domain Description: HNHc Note: nucleases Location: 213810-213978 bp Feature: domain Description: HNHc Note: nucleases Location: 21 381 0-21 3978 bp Feature: gene Location: 214140-215570 bp Ori: BAR87583.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 214449-215184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 4449-21 51 84 bp Feature: domain Description: GIIM Note: maturase Location: 215253-215385 bp Feature: domain Description: GIIM Note: maturase Location: 21 5253-21 5385 bp Feature: gene Location: 216061-216471 bp Feature: gene Location: 216588-217895 bp Ori: BAR87585.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 216873-217512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 6873-21 751 2 bp Feature: domain Description: GIIM Note: maturase Location: 217587-217812 bp Feature: domain Description: GIIM Note: maturase Location: 21 7587-21 781 2 bp Feature: gene Location: 218069-218248 bp Feature: gene Location: 218400-219458 bp Ori: BAR87587.1 Feature: domain Description: DDE_Tnp_1 Location: 218757-219444 bp Feature: domain Description: DDE_Tnp_1 Location: 21 8757-21 9444 bp Feature: gene Location: 281315-282028 bp Feature: gene Location: 282045-284450 bp Ori: BAR87650.1 Feature: domain Description: KOG1000 Location: 282756-282972 bp Feature: domain Description: KOG1 000 Location: 282756-282972 bp Feature: domain Description: KOG1000 Location: 283575-283908 bp Feature: domain Description: KOG1 000 Location: 283575-283908 bp Feature: gene Location: 284725-286590 bp Ori: BAR87651.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285025-285730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285025-285730 bp Feature: domain Description: GIIM Note: maturase Location: 285817-286000 bp Feature: domain Description: GIIM Note: maturase Location: 28581 7-286000 bp Feature: gene Location: 287337-288245 bp Feature: gene Location: 288317-288496 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ftsk_gamma (smart00843), RVT-GII, GIIM (pfam08388), HNHc (smart00507), Intron_maturas2 (pfam01348), LPD1 (pfam18796), DUF3854 (pfam12965), TrbL (pfam04610), CwlT_like, NlpD (COG0739)
Spr (COG0791), DDE_Tnp_1 (pfam01609), PinE (COG1961), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily )

Seq: AP014864.1 Bacillus thuringiensis serovar tolworthi DNA, complete genome, strain: Pasteur Institute Standard strain (5896839 bp)
Overview 1 RT 1: 1876626-1886122 bp 2 RT 2: 2425313-2430259 bp 3 RT 3: 2749059-2753524 bp 4 RT 4: 2849812-2855915 bp 5 RT 5: 3182457-3187949 bp 6 RT 6: 3254485-3260390 bp 7 RT 7: 3423717-3428771 bp 8 RT 8: 4808525-4813925 bp 9 RT 9: 4844503-4853397 bp 10 RT 10: 5253931-5258570 bp Neighborhood of RT #1 [1876626, 1886136] DDE_Tnp_1 RVT-GII GIIM DDE_Tnp_1 RVT-GII GIIM FeuA FepD Neighborhood of RT #2 [2425313, 2430270] DDE_Tnp_1 RVT-GII LPXTG_anchor DUF4430 Neighborhood of RT #3 [2749059, 2754051] DDE_Tnp_1 RVT-GII GIIM DUF1910 DUF1911 Neighborhood of RT #4 [2849812, 2856028] DDE_Tnp_1 RVT-GII GIIM DDE_Tnp_1 YdfJ Neighborhood of RT #5 [3182457, 3187963] HxlR DDE_Tnp_1 RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #6 [3254485, 3260413] PRK09183 COG4584 RVT-GII Intron_maturas2 Lysozyme_like Ere-like Neighborhood of RT #7 [3423717, 3428785] PHA02517 Peptidases_S8_Thermitase_like RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #8 [4808525, 4813925] Ntn_PVA ETR_like RVT-GII HNHc Neighborhood of RT #9 [4844503, 4853411] PRK14483 VanZ RVT-GII GIIM DDE_Tnp_1 RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #10 [5253931, 5258584] alaDH GIIM RVT-GII DDE_Tnp_1 Feature: gene Location: 1876626-1877684 bp Ori: BAR82886.1 Feature: domain Description: DDE_Tnp_1 Location: 1876986-1877670 bp Feature: domain Description: DDE_Tnp_1 Location: 1876986-1877670 bp Feature: gene Location: 1877836-1878015 bp Feature: gene Location: 1878189-1879496 bp Ori: BAR82888.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1878474-1879113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1878474-1879113 bp Feature: domain Description: GIIM Note: maturase Location: 1879188-1879413 bp Feature: domain Description: GIIM Note: maturase Location: 1879188-1879413 bp Feature: gene Location: 1880257-1881315 bp Ori: BAR82889.1 Feature: domain Description: DDE_Tnp_1 Location: 1880614-1881301 bp Feature: domain Description: DDE_Tnp_1 Location: 1880614-1881301 bp Feature: gene Location: 1881467-1881646 bp Feature: gene Location: 1881820-1883127 bp Ori: BAR82891.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1882105-1882744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1882 105-1882 744 bp Feature: domain Description: GIIM Note: maturase Location: 1882819-1883044 bp Feature: domain Description: GIIM Note: maturase Location: 1882 819-1883044 bp Feature: gene Location: 1884136-1885101 bp Ori: BAR82892.1 Feature: domain Description: FeuA Location: 1884295-1885042 bp Feature: domain Description: FeuA Location: 18842 95-1885042 bp Feature: gene Location: 1885129-1886136 bp Ori: BAR82893.1 Feature: domain Description: FepD Location: 1885159-1886122 bp Feature: domain Description: FepD Location: 1885159-188612 2 bp Feature: gene Location: 2425313-2426371 bp Ori: BAR83466.1 Feature: domain Description: DDE_Tnp_1 Location: 2425670-2426357 bp Feature: domain Description: DDE_Tnp_1 Location: 2 42 5670-2 42 6357 bp Feature: gene Location: 2426523-2426702 bp Feature: gene Location: 2426876-2427997 bp Ori: BAR83468.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2427161-2427800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 42 7161-2 42 7800 bp Feature: gene Location: 2428915-2429373 bp Ori: BAR83469.1 Feature: domain Description: LPXTG_anchor Location: 2429269-2429365 bp Feature: domain Description: LPXTG_anchor Location: 2 42 92 69-2 42 9365 bp Feature: gene Location: 2429431-2430270 bp Ori: BAR83470.1 Feature: domain Description: DUF4430 Location: 2430049-2430259 bp Feature: domain Description: DUF4430 Location: 2 430049-2 4302 59 bp Feature: gene Location: 2749059-2750117 bp Ori: BAR83781.1 Feature: domain Description: DDE_Tnp_1 Location: 2749416-2750103 bp Feature: domain Description: DDE_Tnp_1 Location: 2 749416-2 750103 bp Feature: gene Location: 2750269-2750448 bp Feature: gene Location: 2750622-2751929 bp Ori: BAR83783.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2750907-2751546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 750907-2 751546 bp Feature: domain Description: GIIM Note: maturase Location: 2751621-2751846 bp Feature: domain Description: GIIM Note: maturase Location: 2 75162 1-2 751846 bp Feature: gene Location: 2752618-2752776 bp Feature: gene Location: 2752804-2754051 bp Ori: BAR83785.1 Feature: domain Description: DUF1910 Location: 2752810-2753176 bp Feature: domain Description: DUF1910 Location: 2 752 810-2 753176 bp Feature: domain Description: DUF1911 Location: 2753203-2753524 bp Feature: domain Description: DUF1911 Location: 2 7532 03-2 75352 4 bp Feature: gene Location: 2849812-2850870 bp Ori: BAR83876.1 Feature: domain Description: DDE_Tnp_1 Location: 2850172-2850856 bp Feature: domain Description: DDE_Tnp_1 Location: 2 850172 -2 850856 bp Feature: gene Location: 2851022-2851201 bp Feature: gene Location: 2851375-2852682 bp Ori: BAR83878.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2851660-2852299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 851660-2 852 2 99 bp Feature: domain Description: GIIM Note: maturase Location: 2852374-2852599 bp Feature: domain Description: GIIM Note: maturase Location: 2 852 374-2 852 599 bp Feature: gene Location: 2853479-2854915 bp Ori: BAR83879.1 Feature: domain Description: DDE_Tnp_1 Location: 2853836-2854634 bp Feature: domain Description: DDE_Tnp_1 Location: 2 853836-2 854634 bp Feature: gene Location: 2855081-2856028 bp Ori: BAR83880.1 Feature: domain Description: YdfJ Location: 2855087-2855915 bp Feature: domain Description: YdfJ Location: 2 855087-2 855915 bp Feature: gene Location: 3182457-3182717 bp Ori: BAR84243.1 Feature: domain Description: HxlR Location: 3182472-3182709 bp Feature: domain Description: HxlR Location: 3182 472 -3182 709 bp Feature: gene Location: 3182896-3184332 bp Ori: BAR84244.1 Feature: domain Description: DDE_Tnp_1 Location: 3183253-3184051 bp Feature: domain Description: DDE_Tnp_1 Location: 31832 53-3184051 bp Feature: gene Location: 3185093-3186400 bp Ori: BAR84245.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3185378-3186017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3185378-3186017 bp Feature: domain Description: GIIM Note: maturase Location: 3186092-3186317 bp Feature: domain Description: GIIM Note: maturase Location: 3186092 -3186317 bp Feature: gene Location: 3186574-3186753 bp Feature: gene Location: 3186905-3187963 bp Ori: BAR84247.1 Feature: domain Description: DDE_Tnp_1 Location: 3187265-3187949 bp Feature: domain Description: DDE_Tnp_1 Location: 31872 65-3187949 bp Feature: gene Location: 3254485-3255237 bp Ori: BAR84310.1 Feature: domain Description: PRK09183 Location: 3254491-3255217 bp Feature: domain Description: PRK09183 Location: 32 54491-32 552 17 bp Feature: gene Location: 3255227-3256522 bp Ori: BAR84311.1 Feature: domain Description: COG4584 Location: 3255641-3256031 bp Feature: domain Description: COG4584 Location: 32 55641-32 56031 bp Feature: gene Location: 3256577-3258169 bp Ori: BAR84312.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3256841-3257675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 56841-32 57675 bp Feature: domain Description: Intron_maturas2 Location: 3257744-3258083 bp Feature: domain Description: Intron_maturas2 Location: 32 57744-32 58083 bp Feature: gene Location: 3258745-3259326 bp Ori: BAR84313.1 Feature: domain Description: Lysozyme_like Location: 3258880-3259315 bp Feature: domain Description: Lysozyme_like Location: 32 58880-32 59315 bp Feature: gene Location: 3259823-3260413 bp Ori: BAR84314.1 Feature: domain Description: Ere-like Location: 3259826-3260390 bp Feature: domain Description: Ere-like Location: 32 5982 6-32 60390 bp Feature: gene Location: 3423717-3424175 bp Ori: BAR84472.1 Feature: domain Description: PHA02517 Location: 3423777-3424170 bp Feature: domain Description: PHA02 517 Location: 342 3777-342 4170 bp Feature: gene Location: 3424653-3425273 bp Ori: BAR84473.1 Feature: domain Description: Peptidases_S8_Thermitase_like Location: 3424983-3425262 bp Feature: domain Description: Peptidases_S8_Thermitase_like Location: 342 4983-342 52 62 bp Feature: gene Location: 3425915-3427222 bp Ori: BAR84474.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3426200-3426839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 342 62 00-342 6839 bp Feature: domain Description: GIIM Note: maturase Location: 3426914-3427139 bp Feature: domain Description: GIIM Note: maturase Location: 342 6914-342 7139 bp Feature: gene Location: 3427396-3427575 bp Feature: gene Location: 3427727-3428785 bp Ori: BAR84476.1 Feature: domain Description: DDE_Tnp_1 Location: 3428087-3428771 bp Feature: domain Description: DDE_Tnp_1 Location: 342 8087-342 8771 bp Feature: gene Location: 4808525-4809511 bp Ori: BAR85946.1 Feature: domain Description: Ntn_PVA Location: 4808531-4809431 bp Feature: domain Description: Ntn_PVA Location: 4808531-4809431 bp Feature: gene Location: 4809687-4810670 bp Ori: BAR85947.1 Feature: domain Description: ETR_like Location: 4809708-4810644 bp Feature: domain Description: ETR_like Location: 4809708-4810644 bp Feature: gene Location: 4811344-4813149 bp Ori: BAR85948.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4811638-4812334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4811638-4812 334 bp Feature: domain Description: HNHc Note: nucleases Location: 4812895-4813033 bp Feature: domain Description: HNHc Note: nucleases Location: 4812 895-4813033 bp Feature: gene Location: 4813377-4813682 bp Feature: gene Location: 4813779-4813925 bp Feature: gene Location: 4844503-4845501 bp Ori: BAR85991.1 Feature: domain Description: PRK14483 Location: 4844506-4845499 bp Feature: domain Description: PRK14483 Location: 4844506-4845499 bp Feature: gene Location: 4845601-4846236 bp Ori: BAR85992.1 Feature: domain Description: VanZ Location: 4845652-4846135 bp Feature: domain Description: VanZ Location: 4845652 -4846135 bp Feature: gene Location: 4846910-4848217 bp Ori: BAR85993.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4847195-4847834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4847195-4847834 bp Feature: domain Description: GIIM Note: maturase Location: 4847909-4848134 bp Feature: domain Description: GIIM Note: maturase Location: 4847909-4848134 bp Feature: gene Location: 4848391-4848570 bp Feature: gene Location: 4848722-4849780 bp Ori: BAR85995.1 Feature: domain Description: DDE_Tnp_1 Location: 4849079-4849766 bp Feature: domain Description: DDE_Tnp_1 Location: 4849079-4849766 bp Feature: gene Location: 4850541-4851848 bp Ori: BAR85996.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4850826-4851465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 485082 6-4851465 bp Feature: domain Description: GIIM Note: maturase Location: 4851540-4851765 bp Feature: domain Description: GIIM Note: maturase Location: 4851540-4851765 bp Feature: gene Location: 4852022-4852201 bp Feature: gene Location: 4852353-4853411 bp Ori: BAR85998.1 Feature: domain Description: DDE_Tnp_1 Location: 4852713-4853397 bp Feature: domain Description: DDE_Tnp_1 Location: 4852 713-4853397 bp Feature: gene Location: 5253931-5255019 bp Ori: BAR86401.1 Feature: domain Description: alaDH Location: 5253934-5254996 bp Feature: domain Description: alaDH Location: 52 53934-52 54996 bp Feature: gene Location: 5255713-5256051 bp Ori: BAR86402.1 Feature: domain Description: GIIM Note: maturase Location: 5255743-5255968 bp Feature: domain Description: GIIM Note: maturase Location: 52 55743-52 55968 bp Feature: gene Location: 5256098-5257021 bp Ori: BAR86403.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5256383-5257010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 56383-52 57010 bp Feature: gene Location: 5257195-5257374 bp Feature: gene Location: 5257526-5258584 bp Ori: BAR86405.1 Feature: domain Description: DDE_Tnp_1 Location: 5257886-5258570 bp Feature: domain Description: DDE_Tnp_1 Location: 52 57886-52 58570 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), FeuA (cd01138), FepD (COG0609), LPXTG_anchor (TIGR01167), DUF4430 (pfam14478), DUF1910 (pfam08928), DUF1911 (pfam08929), YdfJ (COG2409)
HxlR (pfam01638), PRK09183 (transposase/IS protein; Provisional), COG4584 (Transposase ), Intron_maturas2 (pfam01348), Lysozyme_like (pfam13702), Ere-like (cd14728), PHA02517 (putative transposase OrfB; Reviewed), Peptidases_S8_Thermitase_like (cd07484), Ntn_PVA (cd00542), ETR_like (cd05282)
HNHc (smart00507), PRK14483 (DhaKLM operon coactivator DhaQ; Provisional), VanZ (pfam04892), alaDH (TIGR00518)

Seq: AP014865.1 Bacillus thuringiensis serovar tolworthi plasmid pKK1 DNA, complete genome, strain: Pasteur Institute Standard strain (437451 bp)
Overview 1 RT 1: 300703-304893 bp 2 RT 2: 405579-420725 bp Neighborhood of RT #1 [300703, 304907] DDE_Tnp_1 RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #2 [405579, 420725] rpsA Ftsk_gamma Ftsk_gamma RVT-GII GIIM HNHc RVT-GII HNHc RVT-GII Intron_maturas2 HNHc PRK09183 COG4584 RVT-GII Feature: gene Location: 300703-300942 bp Feature: gene Location: 301501-301920 bp Ori: BAR87244.1 Feature: domain Description: DDE_Tnp_1 Location: 301537-301639 bp Feature: domain Description: DDE_Tnp_1 Location: 3 0153 7-3 0163 9 bp Feature: gene Location: 302037-303344 bp Ori: BAR87245.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 302322-302961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 023 22-3 02961 bp Feature: domain Description: GIIM Note: maturase Location: 303036-303261 bp Feature: domain Description: GIIM Note: maturase Location: 3 03 03 6-3 03 261 bp Feature: gene Location: 303518-303697 bp Feature: gene Location: 303849-304907 bp Ori: BAR87247.1 Feature: domain Description: DDE_Tnp_1 Location: 304206-304893 bp Feature: domain Description: DDE_Tnp_1 Location: 3 04206-3 04893 bp Feature: gene Location: 405579-406562 bp Ori: BAR87351.1 Feature: domain Description: rpsA Location: 405846-406383 bp Feature: domain Description: rpsA Location: 405846-4063 83 bp Feature: gene Location: 406821-408380 bp Ori: BAR87352.1 Feature: domain Description: Ftsk_gamma Location: 407370-407550 bp Feature: domain Description: Ftsk_gamma Location: 4073 70-407550 bp Feature: domain Description: Ftsk_gamma Location: 407703-407877 bp Feature: domain Description: Ftsk_gamma Location: 407703 -407877 bp Feature: gene Location: 408754-410628 bp Ori: BAR87353.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 409054-409759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 409054-409759 bp Feature: domain Description: GIIM Note: maturase Location: 409873-410041 bp Feature: domain Description: GIIM Note: maturase Location: 409873 -410041 bp Feature: domain Description: HNHc Note: nucleases Location: 410389-410554 bp Feature: domain Description: HNHc Note: nucleases Location: 4103 89-410554 bp Feature: gene Location: 411301-411738 bp Feature: gene Location: 411804-413594 bp Ori: BAR87355.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 412101-412797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 412101-412797 bp Feature: domain Description: HNHc Note: nucleases Location: 413337-413469 bp Feature: domain Description: HNHc Note: nucleases Location: 413 3 3 7-413 469 bp Feature: gene Location: 414276-414422 bp Feature: gene Location: 414561-415487 bp Ori: BAR87357.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 414570-414762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 414570-414762 bp Feature: domain Description: Intron_maturas2 Location: 414834-415152 bp Feature: domain Description: Intron_maturas2 Location: 41483 4-415152 bp Feature: domain Description: HNHc Note: nucleases Location: 415302-415458 bp Feature: domain Description: HNHc Note: nucleases Location: 4153 02-415458 bp Feature: gene Location: 415848-416600 bp Ori: BAR87358.1 Feature: domain Description: PRK09183 Location: 415854-416580 bp Feature: domain Description: PRK09183 Location: 415854-416580 bp Feature: gene Location: 416590-417885 bp Ori: BAR87359.1 Feature: domain Description: COG4584 Location: 417004-417394 bp Feature: domain Description: COG4584 Location: 417004-4173 94 bp Feature: gene Location: 417940-418572 bp Ori: BAR87360.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 418210-418537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 418210-41853 7 bp Feature: gene Location: 419173-420318 bp Feature: gene Location: 420336-420725 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), rpsA (TIGR00717), Ftsk_gamma (smart00843), HNHc (smart00507), Intron_maturas2 (pfam01348), PRK09183 (transposase/IS protein; Provisional), COG4584 (Transposase )

Seq: AP014867.1 Bacillus thuringiensis serovar tolworthi plasmid pKK3 DNA, complete genome, strain: Pasteur Institute Standard strain (130548 bp)
Overview 1 RT 1: 5559-12794 bp 2 RT 2: 19106-32180 bp Neighborhood of RT #1 [5559, 12794] RVT-GII GIIM DEXHc_HARP_SMARCAL1 HELICc Neighborhood of RT #2 [19106, 32182] Endotoxin_N XTALbg XTALbg RicinB_lectin_2 RicinB_lectin_2 PI-PLCc_BcPLC_like RVT-GII GIIM PRK06526 HTH_23 COG4584 DDE_Tnp_1 RVT-GII GIIM ST1585-like_MBL-fold ST1585-like_MBL-fold Feature: gene Location: 5559-5786 bp Feature: gene Location: 5858-6766 bp Feature: gene Location: 7513-9378 bp Ori: BAR87667.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7813-8518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7813-8518 bp Feature: domain Description: GIIM Note: maturase Location: 8605-8788 bp Feature: domain Description: GIIM Note: maturase Location: 8605-8788 bp Feature: gene Location: 9653-12058 bp Ori: BAR87668.1 Feature: domain Description: DEXHc_HARP_SMARCAL1 Location: 10364-10571 bp Feature: domain Description: DEXHc_HARP_SMARCAL1 Location: 10364 -10571 bp Feature: domain Description: HELICc Location: 11039-11447 bp Feature: domain Description: HELICc Location: 11039-114 4 7 bp Feature: gene Location: 12075-12794 bp Feature: gene Location: 19106-22003 bp Ori: BAR87679.1 Feature: domain Description: Endotoxin_N Location: 19304-19994 bp Feature: domain Description: Endotoxin_N Location: 19304 -19994 bp Feature: domain Description: XTALbg Location: 21065-21287 bp Feature: domain Description: XTALbg Location: 21065-21287 bp Feature: domain Description: XTALbg Location: 21305-21539 bp Feature: domain Description: XTALbg Location: 21305-21539 bp Feature: domain Description: RicinB_lectin_2 Location: 21566-21749 bp Feature: domain Description: RicinB_lectin_2 Location: 21566-2174 9 bp Feature: domain Description: RicinB_lectin_2 Location: 21776-21929 bp Feature: domain Description: RicinB_lectin_2 Location: 21776-21929 bp Feature: gene Location: 22190-22393 bp Ori: BAR87680.1 Feature: domain Description: PI-PLCc_BcPLC_like Location: 22244-22325 bp Feature: domain Description: PI-PLCc_BcPLC_like Location: 2224 4 -22325 bp Feature: gene Location: 22582-23793 bp Ori: BAR87681.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22588-22924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22588-22924 bp Feature: domain Description: GIIM Note: maturase Location: 23038-23203 bp Feature: domain Description: GIIM Note: maturase Location: 23038-23203 bp Feature: gene Location: 23983-24762 bp Ori: BAR87682.1 Feature: domain Description: PRK06526 Location: 24016-24727 bp Feature: domain Description: PRK06526 Location: 24 016-24 727 bp Feature: gene Location: 24774-26348 bp Ori: BAR87683.1 Feature: domain Description: HTH_23 Location: 24786-24906 bp Feature: domain Description: HTH_23 Location: 24 786-24 906 bp Feature: domain Description: COG4584 Location: 25206-25662 bp Feature: domain Description: COG4 584 Location: 25206-25662 bp Feature: gene Location: 27626-28549 bp Ori: BAR87685.1 Feature: domain Description: DDE_Tnp_1 Location: 27983-28535 bp Feature: domain Description: DDE_Tnp_1 Location: 27983-28535 bp Feature: gene Location: 28701-28880 bp Feature: gene Location: 29054-30361 bp Ori: BAR87687.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29339-29978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29339-29978 bp Feature: domain Description: GIIM Note: maturase Location: 30053-30278 bp Feature: domain Description: GIIM Note: maturase Location: 30053-30278 bp Feature: gene Location: 31517-31963 bp Ori: BAR87688.1 Feature: domain Description: ST1585-like_MBL-fold Location: 31520-31682 bp Feature: domain Description: ST1585-like_MBL-fold Location: 31520-31682 bp Feature: gene Location: 32045-32182 bp Ori: BAR87689.1 Feature: domain Description: ST1585-like_MBL-fold Location: 32051-32180 bp Feature: domain Description: ST1585-like_MBL-fold Location: 32051-32180 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DEXHc_HARP_SMARCAL1 (cd18010), HELICc (smart00490), Endotoxin_N (pfam03945), XTALbg (smart00247), RicinB_lectin_2 (pfam14200), PI-PLCc_BcPLC_like (cd08586), PRK06526 (transposase; Provisional), HTH_23 (pfam13384)
COG4584 (Transposase ), DDE_Tnp_1 (pfam01609), ST1585-like_MBL-fold (cd07726)