myRT

myRT report for GCA_001551895.1_ASM155189v1

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Seq: CP014259.1 Agrobacterium tumefaciens strain S33 chromosome circular, complete sequence (2497934 bp)
Overview 1 RT 1: 284927-289712 bp Neighborhood of RT #1 [284927, 289840] InsE PHA02517 RVT-GII GIIM PHA02517 HTH_29 DDE_3 Feature: gene Location: 284927-285256 bp Ori: AMD56935.1 Feature: domain Description: InsE Location: 284933-285242 bp Feature: domain Description: InsE Location: 284933-285242 bp Feature: gene Location: 285370-285678 bp Ori: AMD56936.1 Feature: domain Description: PHA02517 Location: 285379-285646 bp Feature: domain Description: PHA0251 7 Location: 285379-285646 bp Feature: gene Location: 286311-287825 bp Ori: AMD56937.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 286569-287304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 286569-287304 bp Feature: domain Description: GIIM Note: maturase Location: 287376-287577 bp Feature: domain Description: GIIM Note: maturase Location: 287376-287577 bp Feature: gene Location: 287926-288114 bp Feature: domain Description: PHA02517 Location: 287929-288088 bp Feature: domain Description: PHA0251 7 Location: 287929-288088 bp Feature: gene Location: 288800-289840 bp Ori: AMD58727.1 Feature: domain Description: HTH_29 Location: 288863-289013 bp Feature: domain Description: HTH_29 Location: 288863-28901 3 bp Feature: domain Description: DDE_3 Location: 289277-289712 bp Feature: domain Description: DDE_3 Location: 289277-28971 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HTH_29 (pfam13551), DDE_3 (pfam13358)