myRT

myRT report for GCA_001558415.2_ASM155841v2

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Seq: CP014035.2 Vibrio fluvialis strain ATCC 33809 chromosome 2, complete sequence (3155838 bp)
Overview 1 RT 1: 2886664-2890993 bp 2 RT 2: 3015546-3023960 bp Neighborhood of RT #1 [2886664, 2891049] DUF2787 RadC RVT-UG7 GepA Neighborhood of RT #2 [3015546, 3023960] groES groEL RVT_N RVT-GII GIIM HNHc RVT_N RVT-GII GIIM HNHc Feature: gene Location: 2886664-2887107 bp Ori: AMF95840.2 Feature: domain Description: DUF2787 Location: 2886712-2887087 bp Feature: domain Description: DUF2787 Location: 288671 2-2887087 bp Feature: gene Location: 2887098-2887571 bp Ori: AMF95841.1 Feature: domain Description: RadC Location: 2887131-2887569 bp Feature: domain Description: RadC Location: 28871 31 -2887569 bp Feature: gene Location: 2887991-2889628 bp Ori: AMF95842.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2888429-2888828 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2888429-2888828 bp Feature: gene Location: 2889616-2890362 bp Feature: gene Location: 2890582-2891049 bp Ori: AMF95844.1 Feature: domain Description: GepA Location: 2890600-2890993 bp Feature: domain Description: GepA Location: 2890600-2890993 bp Feature: gene Location: 3015546-3015836 bp Ori: AMF95942.1 Gene: groES Feature: domain Description: groES Location: 3015549-3015834 bp Feature: domain Description: groES Location: 301 5549-301 5834 bp Feature: gene Location: 3015887-3017524 bp Ori: AMF95943.1 Gene: groL Feature: domain Description: groEL Location: 3015893-3017513 bp Feature: domain Description: groEL Location: 301 5893-301 751 3 bp Feature: gene Location: 3018548-3020206 bp Ori: AMF96213.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3018605-3018848 bp Feature: domain Description: RVT_N Location: 301 8605-301 8848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3018893-3019538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301 8893-301 9538 bp Feature: domain Description: GIIM Note: maturase Location: 3019589-3019823 bp Feature: domain Description: GIIM Note: maturase Location: 301 9589-301 9823 bp Feature: domain Description: HNHc Note: nucleases Location: 3020051-3020201 bp Feature: domain Description: HNHc Note: nucleases Location: 3020051 -3020201 bp Feature: gene Location: 3021681-3023375 bp Ori: AMF96214.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3021738-3021981 bp Feature: domain Description: RVT_N Location: 3021 738-3021 981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3022026-3022671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3022026-3022671 bp Feature: domain Description: GIIM Note: maturase Location: 3022722-3022956 bp Feature: domain Description: GIIM Note: maturase Location: 3022722-3022956 bp Feature: domain Description: HNHc Note: nucleases Location: 3023184-3023334 bp Feature: domain Description: HNHc Note: nucleases Location: 30231 84-3023334 bp Feature: gene Location: 3023413-3023715 bp Feature: gene Location: 3023769-3023960 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2787 (pfam10980), RadC (pfam04002), RVT-UG7, GepA (COG3600), groES (PRK14533), groEL (PRK12852), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)