myRT

myRT report for GCA_001558495.2_ASM155849v2

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Seq: CP014047.2 Vibrio parahaemolyticus strain ATCC 17802 chromosome 2, complete sequence (1865659 bp)
Overview 1 RT 1: 596821-616717 bp Neighborhood of RT #1 [596821, 616746] AAA_21 RVT-Retrons DUF2384 RVT-UG1 HsdR HTH_Tnp_ISL3 DDE_Tnp_ISL3 Feature: gene Location: 596821-598404 bp Feature: gene Location: 598517-600625 bp Ori: AMG08653.1 Feature: domain Description: AAA_21 Location: 598592-599540 bp Feature: domain Description: AAA_21 Location: 598592-599540 bp Feature: gene Location: 600812-601861 bp Ori: AMG08654.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 600947-601487 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 600947-601 487 bp Feature: gene Location: 601917-603626 bp Feature: gene Location: 603683-604863 bp Feature: gene Location: 605601-605840 bp Ori: AMG08656.1 Feature: domain Description: DUF2384 Location: 605688-605829 bp Feature: domain Description: DUF2384 Location: 605688-605829 bp Feature: gene Location: 606118-608025 bp Feature: gene Location: 608479-612348 bp Ori: AMG08658.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 609166-609694 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 6091 66-609694 bp Feature: gene Location: 612418-615366 bp Feature: domain Description: HsdR Location: 612454-615283 bp Feature: domain Description: HsdR Location: 61 2454-61 5283 bp Feature: gene Location: 615562-616746 bp Ori: AMG09694.2 Feature: domain Description: HTH_Tnp_ISL3 Location: 615805-615952 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 61 5805-61 5952 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 616000-616717 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 61 6000-61 671 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), RVT-Retrons, DUF2384 (pfam09722), RVT-UG1, HsdR (COG4096), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610)