myRT

myRT report for GCA_001558915.2_ASM155891v2

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Seq: CP014065.2 Achromobacter xylosoxidans strain FDAARGOS_162 chromosome, complete genome (6547320 bp)
Overview 1 RT 1: 195655-202251 bp 2 RT 2: 2195611-2201061 bp Neighborhood of RT #1 [195655, 202251] DEXQc_UvrD DEXQc_UvrD UvrD_C_2 SF2_C_SNF RVT_N RVT-GII DEXHc_Snf DEXHc_Snf Neighborhood of RT #2 [2195611, 2201061] HTH_17 SF2_C_SNF RVT_N RVT-GII GIIM HNHc DEXHc_Snf DEXHc_Snf Feature: gene Location: 195655-197073 bp Ori: AMG43383.1 Feature: domain Description: DEXQc_UvrD Location: 195703-195937 bp Feature: domain Description: DEXQc_UvrD Location: 1 95703-1 95937 bp Feature: domain Description: DEXQc_UvrD Location: 195964-196168 bp Feature: domain Description: DEXQc_UvrD Location: 1 95964-1 961 68 bp Feature: domain Description: UvrD_C_2 Location: 196948-197050 bp Feature: domain Description: UvrD_C_2 Location: 1 96948-1 97050 bp Feature: gene Location: 197156-198232 bp Feature: domain Description: SF2_C_SNF Location: 197693-198068 bp Feature: domain Description: SF2_C_SNF Location: 1 97693-1 98068 bp Feature: gene Location: 198315-200017 bp Gene: ltrA Feature: domain Description: RVT_N Location: 198372-198615 bp Feature: domain Description: RVT_N Location: 1 98372-1 9861 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 198660-198798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 98660-1 98798 bp Feature: gene Location: 200635-201837 bp Feature: domain Description: DEXHc_Snf Location: 200857-201112 bp Feature: domain Description: DEXHc_Snf Location: 200857-201 1 1 2 bp Feature: domain Description: DEXHc_Snf Location: 201658-201814 bp Feature: domain Description: DEXHc_Snf Location: 201 658-201 81 4 bp Feature: gene Location: 201939-202251 bp Feature: gene Location: 2195611-2195817 bp Ori: AMG47969.1 Feature: domain Description: HTH_17 Location: 2195644-2195788 bp Feature: domain Description: HTH_1 7 Location: 21 95644-21 95788 bp Feature: gene Location: 2195972-2197048 bp Feature: domain Description: SF2_C_SNF Location: 2196494-2196887 bp Feature: domain Description: SF2_C_SNF Location: 21 96494-21 96887 bp Feature: gene Location: 2197131-2198834 bp Ori: AMG47970.1 Gene: ltrA Feature: domain Description: RVT_N Location: 2197188-2197431 bp Feature: domain Description: RVT_N Location: 21 971 88-21 97431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2197476-2198112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 97476-21 981 1 2 bp Feature: domain Description: GIIM Note: maturase Location: 2198166-2198397 bp Feature: domain Description: GIIM Note: maturase Location: 21 981 66-21 98397 bp Feature: domain Description: HNHc Note: nucleases Location: 2198631-2198787 bp Feature: domain Description: HNHc Note: nucleases Location: 21 98631 -21 98787 bp Feature: gene Location: 2199452-2200675 bp Feature: domain Description: DEXHc_Snf Location: 2199695-2199950 bp Feature: domain Description: DEXHc_Snf Location: 21 99695-21 99950 bp Feature: domain Description: DEXHc_Snf Location: 2200511-2200649 bp Feature: domain Description: DEXHc_Snf Location: 220051 1 -2200649 bp Feature: gene Location: 2200756-2201061 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXQc_UvrD (cd17932), UvrD_C_2 (pfam13538), SF2_C_SNF (cd18793), RVT_N (pfam13655), RVT-GII, DEXHc_Snf (cd17919), HTH_17 (pfam12728), GIIM (pfam08388), HNHc (smart00507)