myRT

myRT report for GCA_001559135.2_ASM155913v2

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Seq: CP014017.2 Serratia liquefaciens strain FDAARGOS_125 chromosome, complete genome (5284740 bp)
Overview 1 RT 1: 1420472-1424973 bp 2 RT 2: 3433852-3441868 bp Neighborhood of RT #1 [1420472, 1424975] heptsyl_trn_III RVT-UG4 FimA PRK15287 Neighborhood of RT #2 [3433852, 3442215] FimD FimA RVT-UG4 SMC_prok_A PRK10902 Feature: gene Location: 1420472-1421554 bp Gene: rfaQ Feature: domain Description: heptsyl_trn_III Location: 1420529-1421549 bp Feature: domain Description: heptsyl_trn_III Location: 1 420529-1 421 549 bp Feature: gene Location: 1422057-1422776 bp Feature: gene Location: 1422868-1423890 bp Ori: AMG98894.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1423246-1423693 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 423246-1 423693 bp Feature: gene Location: 1423883-1424371 bp Ori: AMG98895.2 Feature: domain Description: FimA Location: 1423901-1424369 bp Feature: domain Description: FimA Location: 1 423901 -1 424369 bp Feature: gene Location: 1424457-1424975 bp Ori: AMG98896.1 Feature: domain Description: PRK15287 Location: 1424496-1424973 bp Feature: domain Description: PRK1 5287 Location: 1 424496-1 424973 bp Feature: gene Location: 3433852-3436506 bp Ori: AMH00549.2 Feature: domain Description: FimD Location: 3433954-3436429 bp Feature: domain Description: FimD Location: 3433954-3436429 bp Feature: gene Location: 3436497-3437174 bp Ori: AMH00551.2 Feature: domain Description: FimA Location: 3436596-3437169 bp Feature: domain Description: FimA Location: 3436596-34371 69 bp Feature: gene Location: 3437352-3438272 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3437652-3438108 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3437652-34381 08 bp Feature: gene Location: 3439766-3440428 bp Feature: gene Location: 3440548-3442215 bp Ori: AMH00553.1 Feature: domain Description: SMC_prok_A Location: 3440719-3441505 bp Feature: domain Description: SMC_prok_A Location: 344071 9-3441 505 bp Feature: domain Description: PRK10902 Location: 3441583-3441868 bp Feature: domain Description: PRK1 0902 Location: 3441 583-3441 868 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT heptsyl_trn_III (TIGR02201), RVT-UG4, FimA (pfam16970), PRK15287 (fimbrial minor subunit StfF), FimD (COG3188), SMC_prok_A (TIGR02169), PRK10902 (FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional)