myRT

myRT report for GCA_001562235.1_ASM156223v1

Download annotations/find similar RTs

Seq: CP014323.1 Alteromonas macleodii strain D7, complete genome (4575623 bp)
Overview 1 RT 1: 535718-542568 bp 2 RT 2: 831451-840610 bp Neighborhood of RT #1 [535718, 542597] RVT-GII GIIM antidote_HigA YoeB_toxin PRK11409 HTH_XRE RVT-GII GIIM ParD_like Neighborhood of RT #2 [831451, 840639] COG0610 AAA_13 RVT-UG17 SLATT_5 RMtype1_S_EcoJA65PI-TRD1-CR1_like RMtype1_S_EcoJA65PI-TRD1-CR1_like Feature: gene Location: 535718-536083 bp Feature: gene Location: 536378-536641 bp Feature: gene Location: 537325-538659 bp Ori: AMJ97124.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 537604-538222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 537604-538222 bp Feature: domain Description: GIIM Note: maturase Location: 538267-538489 bp Feature: domain Description: GIIM Note: maturase Location: 538267-538489 bp Feature: gene Location: 538736-539023 bp Ori: AMJ97125.1 Feature: domain Description: antidote_HigA Location: 538751-538979 bp Feature: domain Description: antidote_HigA Location: 538751 -538979 bp Feature: gene Location: 539431-539694 bp Ori: AMJ97126.1 Feature: domain Description: YoeB_toxin Location: 539455-539692 bp Feature: domain Description: YoeB_toxin Location: 539455-539692 bp Feature: gene Location: 539687-539941 bp Ori: AMJ97127.1 Feature: domain Description: PRK11409 Location: 539690-539936 bp Feature: domain Description: PRK1 1 409 Location: 539690-539936 bp Feature: gene Location: 540128-540778 bp Ori: AMJ97128.1 Feature: domain Description: HTH_XRE Location: 540218-540374 bp Feature: domain Description: HTH_XRE Location: 54021 8-540374 bp Feature: gene Location: 541116-541742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 541128-541305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 541 1 28-541 305 bp Feature: domain Description: GIIM Note: maturase Location: 541347-541575 bp Feature: domain Description: GIIM Note: maturase Location: 541 347-541 575 bp Feature: gene Location: 541811-542182 bp Feature: gene Location: 542376-542597 bp Ori: AMJ97130.1 Feature: domain Description: ParD_like Location: 542388-542568 bp Feature: domain Description: ParD_like Location: 542388-542568 bp Feature: gene Location: 831451-834771 bp Ori: AMJ97351.1 Feature: domain Description: COG0610 Location: 831472-834397 bp Feature: domain Description: COG061 0 Location: 831 472-834397 bp Feature: gene Location: 834771-837140 bp Ori: AMJ97352.1 Feature: domain Description: AAA_13 Location: 834804-836658 bp Feature: domain Description: AAA_1 3 Location: 834804-836658 bp Feature: gene Location: 837158-838489 bp Ori: AMJ97353.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 837386-837989 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 837386-837989 bp Feature: gene Location: 838486-839112 bp Ori: AMJ97354.1 Feature: domain Description: SLATT_5 Location: 838498-839089 bp Feature: domain Description: SLATT_5 Location: 838498-839089 bp Feature: gene Location: 839314-840639 bp Ori: AMJ97355.1 Feature: domain Description: RMtype1_S_EcoJA65PI-TRD1-CR1_like Location: 839509-839905 bp Feature: domain Description: RMtype1 _S_EcoJA65PI-TRD1 -CR1 _like Location: 839509-839905 bp Feature: domain Description: RMtype1_S_EcoJA65PI-TRD1-CR1_like Location: 840058-840610 bp Feature: domain Description: RMtype1 _S_EcoJA65PI-TRD1 -CR1 _like Location: 840058-84061 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), antidote_HigA (TIGR02607), YoeB_toxin (pfam06769), PRK11409 (YoeB-YefM toxin-antitoxin system antitoxin YefM), HTH_XRE (smart00530), ParD_like (pfam11903), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), AAA_13 (pfam13166), RVT-UG17
SLATT_5 (pfam18160), RMtype1_S_EcoJA65PI-TRD1-CR1_like (cd17256)