myRT

myRT report for GCA_001562295.1_ASM156229v1

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Seq: CP013930.1 Alteromonas mediterranea strain U10, complete genome (4618068 bp)
Overview 1 RT 1: 957668-964584 bp 2 RT 2: 991684-996246 bp 3 RT 3: 1531266-1538643 bp Neighborhood of RT #1 [957668, 964838] RVT-UG8 RVT-UG3 DUF2779 Neighborhood of RT #2 [991684, 996246] RVT-Retrons AZL_007920_fam Neighborhood of RT #3 [1531266, 1538714] PRK10802 PRK10803 RVT-GII GIIM PRK09375 INT_C_like_1 Feature: gene Location: 957668-958150 bp Feature: gene Location: 958155-958847 bp Feature: gene Location: 959465-961456 bp Ori: AMJ81724.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 959990-960434 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 959990-960434 bp Feature: gene Location: 961456-962691 bp Ori: AMJ81725.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 961744-962221 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 961 744-962221 bp Feature: gene Location: 962669-963337 bp Feature: gene Location: 963360-964838 bp Ori: AMJ81727.1 Feature: domain Description: DUF2779 Location: 964248-964584 bp Feature: domain Description: DUF2779 Location: 964248-964584 bp Feature: gene Location: 991684-992184 bp Feature: gene Location: 992177-992914 bp Feature: gene Location: 993072-994034 bp Ori: AMJ81751.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 993309-993846 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 993309-993846 bp Feature: gene Location: 994809-995618 bp Ori: AMJ81752.1 Feature: domain Description: AZL_007920_fam Location: 995004-995589 bp Feature: domain Description: AZL_007920_fam Location: 995004-995589 bp Feature: gene Location: 995917-996246 bp Feature: gene Location: 1531266-1531832 bp Ori: AMJ82182.1 Feature: domain Description: PRK10802 Location: 1531269-1531827 bp Feature: domain Description: PRK1 0802 Location: 1 531 269-1 531 827 bp Feature: gene Location: 1531832-1532647 bp Ori: AMJ82183.1 Feature: domain Description: PRK10803 Location: 1531889-1532621 bp Feature: domain Description: PRK1 0803 Location: 1 531 889-1 532621 bp Feature: gene Location: 1533360-1534719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1533573-1534194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 533573-1 5341 94 bp Feature: domain Description: GIIM Note: maturase Location: 1534239-1534404 bp Feature: domain Description: GIIM Note: maturase Location: 1 534239-1 534404 bp Feature: gene Location: 1535595-1536650 bp Ori: AMJ82184.1 Feature: domain Description: PRK09375 Location: 1535637-1536621 bp Feature: domain Description: PRK09375 Location: 1 535637-1 536621 bp Feature: gene Location: 1536957-1538714 bp Ori: AMJ82185.1 Feature: domain Description: INT_C_like_1 Location: 1538118-1538643 bp Feature: domain Description: INT_C_like_1 Location: 1 5381 1 8-1 538643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, RVT-UG3, DUF2779 (pfam11074), RVT-Retrons, AZL_007920_fam (TIGR04052), PRK10802 (peptidoglycan-associated lipoprotein Pal), PRK10803 (tol-pal system protein YbgF; Provisional), RVT-GII, GIIM (pfam08388), PRK09375 (quinolinate synthase NadA)
INT_C_like_1 (cd01184)