myRT

myRT report for GCA_001566615.1_ASM156661v1

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Seq: CP014495.1 Escherichia coli strain SaT040, complete geome (5061821 bp)
Overview 1 RT 1: 1409277-1416131 bp Neighborhood of RT #1 [1409277, 1416131] PRK11388 RVT-Retrons Feature: gene Location: 1409277-1411196 bp Ori: AML14107.1 Feature: domain Description: PRK11388 Location: 1409280-1411188 bp Feature: domain Description: PRK1 1 388 Location: 1 409280-1 41 1 1 88 bp Feature: gene Location: 1411233-1411463 bp Feature: gene Location: 1412488-1414245 bp Ori: AML14109.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1412632-1413250 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 41 2632-1 41 3250 bp Feature: gene Location: 1414492-1415619 bp Feature: gene Location: 1415616-1416131 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11388 (DNA-binding transcriptional regulator DhaR; Provisional), RVT-Retrons

Seq: CP014496.1 Escherichia coli strain SaT040 plasmid pSaT040, complete sequence (114223 bp)
Overview 1 RT 1: 276-2464 bp 2 RT 2: 16560-18641 bp Neighborhood of RT #1 [276, 2464] RVT-GII GIIM Neighborhood of RT #2 [16560, 18649] PHA02517 RVT-GII PRK10173 PRK10173 Feature: gene Location: 276-1784 bp Ori: AML17734.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 534-1266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 534-12 66 bp Feature: domain Description: GIIM Note: maturase Location: 1341-1539 bp Feature: domain Description: GIIM Note: maturase Location: 1341-1539 bp Feature: gene Location: 1753-2178 bp Feature: gene Location: 2093-2464 bp Feature: gene Location: 16560-16772 bp Ori: AML17617.1 Feature: domain Description: PHA02517 Location: 16563-16707 bp Feature: domain Description: PHA02 517 Location: 16563-16707 bp Feature: gene Location: 17073-17339 bp Feature: gene Location: 17378-17866 bp Ori: AML17727.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17636-17708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17636-17708 bp Feature: gene Location: 17905-18225 bp Ori: AML17619.1 Feature: domain Description: PRK10173 Location: 17908-18136 bp Feature: domain Description: PRK10173 Location: 17908-18136 bp Feature: gene Location: 18200-18649 bp Ori: AML17620.1 Feature: domain Description: PRK10173 Location: 18203-18641 bp Feature: domain Description: PRK10173 Location: 182 03-18641 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)