myRT

myRT report for GCA_001577325.1_ASM157732v1

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Seq: CP014523.1 Escherichia coli strain ZH063 plasmid pZH063_1, complete sequence (114223 bp)
Overview 1 RT 1: 82085-85179 bp 2 RT 2: 99009-101357 bp Neighborhood of RT #1 [82085, 85179] InsE PHA02517 RVT-GII GIIM Neighborhood of RT #2 [99009, 101365] PHA02517 RVT-GII PRK10173 PRK10173 Feature: gene Location: 82085-82489 bp Ori: AMM39702.1 Feature: domain Description: InsE Location: 82115-82451 bp Feature: domain Description: InsE Location: 821 1 5-82451 bp Feature: gene Location: 82518-82907 bp Feature: domain Description: PHA02517 Location: 82521-82863 bp Feature: domain Description: PHA0251 7 Location: 82521 -82863 bp Feature: gene Location: 82991-84499 bp Ori: AMM39743.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83249-83981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83249-83981 bp Feature: domain Description: GIIM Note: maturase Location: 84056-84254 bp Feature: domain Description: GIIM Note: maturase Location: 84056-84254 bp Feature: gene Location: 84468-84893 bp Feature: gene Location: 84808-85179 bp Feature: gene Location: 99009-99488 bp Ori: AMM39720.1 Feature: domain Description: PHA02517 Location: 99069-99423 bp Feature: domain Description: PHA0251 7 Location: 99069-99423 bp Feature: gene Location: 99789-100055 bp Feature: gene Location: 100094-100582 bp Ori: AMM39722.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100352-100424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 00352-1 00424 bp Feature: gene Location: 100621-100941 bp Ori: AMM39723.1 Feature: domain Description: PRK10173 Location: 100624-100852 bp Feature: domain Description: PRK1 01 73 Location: 1 00624-1 00852 bp Feature: gene Location: 100916-101365 bp Ori: AMM39724.1 Feature: domain Description: PRK10173 Location: 100919-101357 bp Feature: domain Description: PRK1 01 73 Location: 1 0091 9-1 01 357 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: CP014522.1 Escherichia coli strain ZH063, complete genome (5033359 bp)
Overview 1 RT 1: 1337000-1343854 bp 2 RT 2: 1361737-1366140 bp 3 RT 3: 4124837-4128784 bp Neighborhood of RT #1 [1337000, 1343854] PRK11388 RVT-Retrons Neighborhood of RT #2 [1361737, 1366151] PRK09183 PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #3 [4124837, 4128786] zinc_ribbon_11 PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 1337000-1338919 bp Ori: AMM36072.1 Feature: domain Description: PRK11388 Location: 1337003-1338911 bp Feature: domain Description: PRK11388 Location: 1337003-1338911 bp Feature: gene Location: 1338956-1339186 bp Feature: gene Location: 1340211-1341968 bp Ori: AMM36074.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1340355-1340973 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1340355-1340973 bp Feature: gene Location: 1342215-1343342 bp Feature: gene Location: 1343339-1343854 bp Feature: gene Location: 1361737-1362123 bp Feature: domain Description: PRK09183 Location: 1361770-1362121 bp Feature: domain Description: PRK09183 Location: 1361770-1362 12 1 bp Feature: gene Location: 1362746-1363204 bp Feature: domain Description: PHA02517 Location: 1362749-1363196 bp Feature: domain Description: PHA02 517 Location: 1362 749-1363196 bp Feature: gene Location: 1363285-1364793 bp Ori: AMM39459.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1363543-1364275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1363543-13642 75 bp Feature: domain Description: GIIM Note: maturase Location: 1364350-1364548 bp Feature: domain Description: GIIM Note: maturase Location: 1364350-1364548 bp Feature: gene Location: 1365400-1365819 bp Ori: AMM36097.1 Feature: domain Description: PHA02517 Location: 1365415-1365754 bp Feature: domain Description: PHA02 517 Location: 1365415-1365754 bp Feature: gene Location: 1365867-1366151 bp Ori: AMM36098.1 Feature: domain Description: InsE Location: 1365879-1366140 bp Feature: domain Description: InsE Location: 1365879-1366140 bp Feature: gene Location: 4124837-4125319 bp Ori: AMM38615.1 Feature: domain Description: zinc_ribbon_11 Location: 4124936-4125254 bp Feature: domain Description: zinc_ribbon_11 Location: 412 4936-412 52 54 bp Feature: gene Location: 4125303-4125731 bp Ori: AMM39580.1 Feature: domain Description: PHA02517 Location: 4125306-4125729 bp Feature: domain Description: PHA02 517 Location: 412 5306-412 572 9 bp Feature: gene Location: 4125866-4127374 bp Ori: AMM39581.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4126124-4126856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 412 612 4-412 6856 bp Feature: domain Description: GIIM Note: maturase Location: 4126931-4127129 bp Feature: domain Description: GIIM Note: maturase Location: 412 6931-412 712 9 bp Feature: gene Location: 4127981-4128460 bp Ori: AMM38616.1 Feature: domain Description: PHA02517 Location: 4128041-4128395 bp Feature: domain Description: PHA02 517 Location: 412 8041-412 8395 bp Feature: gene Location: 4128460-4128786 bp Ori: AMM38617.1 Feature: domain Description: InsE Location: 4128463-4128784 bp Feature: domain Description: InsE Location: 412 8463-412 8784 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11388 (DNA-binding transcriptional regulator DhaR; Provisional), RVT-Retrons, PRK09183 (transposase/IS protein; Provisional), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), zinc_ribbon_11 (pfam11682)