myRT

myRT report for GCA_001578185.1_ASM157818v1

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Seq: CP011008.1 Bacillus simplex strain SH-B26, complete genome (5345500 bp)
Overview 1 RT 1: 605329-612278 bp 2 RT 2: 627380-636775 bp 3 RT 3: 639419-645342 bp 4 RT 4: 654093-659794 bp 5 RT 5: 674514-685432 bp 6 RT 6: 694014-700141 bp 7 RT 7: 1785491-1788582 bp 8 RT 8: 2430803-2433728 bp 9 RT 9: 2438815-2443490 bp 10 RT 10: 2915740-2920243 bp 11 RT 11: 3146449-3151169 bp 12 RT 12: 3992549-3999263 bp 13 RT 13: 4240905-4245499 bp 14 RT 14: 4487506-4494641 bp 15 RT 15: 4512873-4518850 bp 16 RT 16: 4530164-4536999 bp 17 RT 17: 4543845-4550608 bp 18 RT 18: 4558242-4562442 bp 19 RT 19: 4571843-4577195 bp 20 RT 20: 4801710-4807490 bp 21 RT 21: 4817789-4824550 bp 22 RT 22: 4891369-4895709 bp 23 RT 23: 5322212-5328090 bp 24 RT 24: 5336893-5343802 bp Neighborhood of RT #1 [605329, 612616] MdaB PadR RVT-GII GIIM DacC Neighborhood of RT #2 [627380, 636795] HTH_YyaN DltE RVT-GII GIIM RVT-GII GIIM SDR_c Neighborhood of RT #3 [639419, 645342] RpoE Sigma_reg_N Sigma_reg_C RVT-GII GIIM Neighborhood of RT #4 [654093, 659794] PHA02517 AHL_lactonase_MBL-fold RVT-GII GIIM Neighborhood of RT #5 [674514, 685437] NIPSNAP PRK12879 RVT-GII GIIM YczE MarR Acetyltransf_1 PaiB RVT-GII GIIM Cupredoxin_like_3 DUF1529 Neighborhood of RT #6 [694014, 700155] COG3547 RVT-GII GIIM HTH_BmrR BltR2 YqgA Neighborhood of RT #7 [1785491, 1788626] RVT-GII GIIM DUF4030 Sig70_famx3 Neighborhood of RT #8 [2430803, 2433793] RVT-GII GIIM CcmA Beta-lactamase Neighborhood of RT #9 [2438815, 2443490] AcrR DUF3995 RVT-GII GIIM XRE Neighborhood of RT #10 [2915740, 2920243] PRK08213 perox_SACOL1771 RVT-GII GIIM PRK03094 Neighborhood of RT #11 [3146449, 3151201] MdaB MhpD RVT-GII PutP Neighborhood of RT #12 [3992549, 3999283] RVT-GII GIIM DUF4064 RVT-GII GIIM PRK07168 hemD Neighborhood of RT #13 [4240905, 4245531] Acetyltransf_10 RVT-GII GIIM TrHb1_N YgiM LdcB Neighborhood of RT #14 [4487506, 4494679] MFS_MT3072_like CwlJ RVT-GII GIIM HTH_ASNC Acetyltransf_1 Neighborhood of RT #15 [4512873, 4518850] YmaE-like_MBL-fold CoxG RVT-GII GIIM UPF0158 Neighborhood of RT #16 [4530164, 4537010] AcrR TetR_C_8 YhgE pip_yhgE_Cterm RVT-GII GIIM DUF4179 DUF4030 Neighborhood of RT #17 [4543845, 4550613] YhgE xxxLxxG_by_4 pip_yhgE_Cterm RVT-GII GIIM DUF2975 YozG Neighborhood of RT #18 [4558242, 4562442] RimL RVT-GII GIIM Neighborhood of RT #19 [4571843, 4577209] Amj RVT-GII GIIM XRE Neighborhood of RT #20 [4801710, 4807492] PRK10621 PRK06197 RVT-GII GIIM PpiB MDR_yhfp_like Neighborhood of RT #21 [4817789, 4824573] PhoA RVT-GII GIIM PurT LysM LysM M14_Endopeptidase_I Neighborhood of RT #22 [4891369, 4895837] BtuF 3D RVT-GII GIIM YuiB Nudix_Hydrolase_12 Neighborhood of RT #23 [5322212, 5328092] GdpP DUF2232 RVT-GII GIIM rpsR PRK06751 Neighborhood of RT #24 [5336893, 5343807] gidA MnmE RVT-GII GIIM Jag PRK02944 Feature: gene Location: 605329-605859 bp Ori: AMM91656.1 Feature: domain Description: MdaB Location: 605335-605851 bp Feature: domain Description: MdaB Location: 605335-605851 bp Feature: gene Location: 606293-606901 bp Ori: AMM95354.1 Feature: domain Description: PadR Location: 606305-606611 bp Feature: domain Description: PadR Location: 606305-60661 1 bp Feature: gene Location: 608590-609918 bp Ori: AMM91657.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 608845-609538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 608845-609538 bp Feature: domain Description: GIIM Note: maturase Location: 609628-609826 bp Feature: domain Description: GIIM Note: maturase Location: 609628-609826 bp Feature: gene Location: 610172-610816 bp Feature: gene Location: 611432-612616 bp Ori: AMM91658.1 Feature: domain Description: DacC Location: 611441-612278 bp Feature: domain Description: DacC Location: 61 1 441 -61 2278 bp Feature: gene Location: 627380-627760 bp Ori: AMM91667.1 Feature: domain Description: HTH_YyaN Location: 627386-627719 bp Feature: domain Description: HTH_YyaN Location: 627386-62771 9 bp Feature: gene Location: 627901-628668 bp Ori: AMM91668.1 Feature: domain Description: DltE Location: 627904-628609 bp Feature: domain Description: DltE Location: 627904-628609 bp Feature: gene Location: 629855-631117 bp Ori: AMM91669.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 630053-630671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 630053-630671 bp Feature: domain Description: GIIM Note: maturase Location: 630722-630932 bp Feature: domain Description: GIIM Note: maturase Location: 630722-630932 bp Feature: gene Location: 631292-631825 bp Feature: gene Location: 631984-632157 bp Feature: gene Location: 632715-633989 bp Ori: AMM91672.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 632916-633531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63291 6-633531 bp Feature: domain Description: GIIM Note: maturase Location: 633591-633801 bp Feature: domain Description: GIIM Note: maturase Location: 633591 -633801 bp Feature: gene Location: 635488-635721 bp Feature: gene Location: 636061-636795 bp Ori: AMM91674.1 Feature: domain Description: SDR_c Location: 636082-636775 bp Feature: domain Description: SDR_c Location: 636082-636775 bp Feature: gene Location: 639419-639925 bp Ori: AMM91677.1 Feature: domain Description: RpoE Location: 639446-639902 bp Feature: domain Description: RpoE Location: 639446-639902 bp Feature: gene Location: 639909-640883 bp Ori: AMM91678.1 Feature: domain Description: Sigma_reg_N Location: 639957-640218 bp Feature: domain Description: Sigma_reg_N Location: 639957-64021 8 bp Feature: domain Description: Sigma_reg_C Location: 640407-640863 bp Feature: domain Description: Sigma_reg_C Location: 640407-640863 bp Feature: gene Location: 642044-643318 bp Ori: AMM91679.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 642245-642860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 642245-642860 bp Feature: domain Description: GIIM Note: maturase Location: 642920-643130 bp Feature: domain Description: GIIM Note: maturase Location: 642920-6431 30 bp Feature: gene Location: 643681-644004 bp Feature: gene Location: 644944-645342 bp Feature: gene Location: 654093-654908 bp Ori: AMM91687.1 Feature: domain Description: PHA02517 Location: 654156-654891 bp Feature: domain Description: PHA0251 7 Location: 6541 56-654891 bp Feature: gene Location: 655546-656298 bp Ori: AMM91688.1 Feature: domain Description: AHL_lactonase_MBL-fold Location: 655561-656257 bp Feature: domain Description: AHL_lactonase_MBL-fold Location: 655561 -656257 bp Feature: gene Location: 656924-658252 bp Ori: AMM91689.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 657179-657872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6571 79-657872 bp Feature: domain Description: GIIM Note: maturase Location: 657962-658160 bp Feature: domain Description: GIIM Note: maturase Location: 657962-6581 60 bp Feature: gene Location: 659465-659794 bp Feature: gene Location: 674514-674819 bp Ori: AMM91697.1 Feature: domain Description: NIPSNAP Location: 674532-674811 bp Feature: domain Description: NIPSNAP Location: 674532-67481 1 bp Feature: gene Location: 675369-676352 bp Ori: AMM91698.1 Feature: domain Description: PRK12879 Location: 675378-676344 bp Feature: domain Description: PRK1 2879 Location: 675378-676344 bp Feature: gene Location: 676968-678230 bp Ori: AMM91699.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 677166-677784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6771 66-677784 bp Feature: domain Description: GIIM Note: maturase Location: 677835-678045 bp Feature: domain Description: GIIM Note: maturase Location: 677835-678045 bp Feature: gene Location: 678355-678999 bp Ori: AMM91700.1 Feature: domain Description: YczE Location: 678358-678958 bp Feature: domain Description: YczE Location: 678358-678958 bp Feature: gene Location: 679116-679568 bp Ori: AMM91701.1 Feature: domain Description: MarR Location: 679155-679521 bp Feature: domain Description: MarR Location: 6791 55-679521 bp Feature: gene Location: 679590-680108 bp Ori: AMM91702.1 Feature: domain Description: Acetyltransf_1 Location: 679680-680031 bp Feature: domain Description: Acetyltransf_1 Location: 679680-680031 bp Feature: gene Location: 680290-680901 bp Ori: AMM91703.1 Feature: domain Description: PaiB Location: 680293-680887 bp Feature: domain Description: PaiB Location: 680293-680887 bp Feature: gene Location: 682843-684105 bp Ori: AMM91704.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 683041-683659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 683041 -683659 bp Feature: domain Description: GIIM Note: maturase Location: 683710-683920 bp Feature: domain Description: GIIM Note: maturase Location: 68371 0-683920 bp Feature: gene Location: 684354-684743 bp Ori: AMM91705.1 Feature: domain Description: Cupredoxin_like_3 Location: 684489-684738 bp Feature: domain Description: Cupredoxin_like_3 Location: 684489-684738 bp Feature: gene Location: 685051-685437 bp Ori: AMM91706.1 Feature: domain Description: DUF1529 Location: 685081-685432 bp Feature: domain Description: DUF1 529 Location: 685081 -685432 bp Feature: gene Location: 694014-695288 bp Ori: AMM91712.1 Feature: domain Description: COG3547 Location: 694080-695190 bp Feature: domain Description: COG3547 Location: 694080-6951 90 bp Feature: gene Location: 695842-696312 bp Feature: gene Location: 697035-698363 bp Ori: AMM91714.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 697290-697983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 697290-697983 bp Feature: domain Description: GIIM Note: maturase Location: 698073-698271 bp Feature: domain Description: GIIM Note: maturase Location: 698073-698271 bp Feature: gene Location: 698591-699409 bp Ori: AMM91715.1 Feature: domain Description: HTH_BmrR Location: 698606-698924 bp Feature: domain Description: HTH_BmrR Location: 698606-698924 bp Feature: domain Description: BltR2 Location: 698966-699404 bp Feature: domain Description: BltR2 Location: 698966-699404 bp Feature: gene Location: 699472-700155 bp Ori: AMM91716.1 Feature: domain Description: YqgA Location: 699475-700141 bp Feature: domain Description: YqgA Location: 699475-7001 41 bp Feature: gene Location: 1785491-1786819 bp Ori: AMM92568.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1785746-1786439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 785746-1 786439 bp Feature: domain Description: GIIM Note: maturase Location: 1786529-1786727 bp Feature: domain Description: GIIM Note: maturase Location: 1 786529-1 786727 bp Feature: gene Location: 1787102-1788106 bp Ori: AMM92569.1 Feature: domain Description: DUF4030 Location: 1787753-1788092 bp Feature: domain Description: DUF4030 Location: 1 787753-1 788092 bp Feature: gene Location: 1788072-1788626 bp Ori: AMM92570.1 Feature: domain Description: Sig70_famx3 Location: 1788075-1788582 bp Feature: domain Description: Sig70_famx3 Location: 1 788075-1 788582 bp Feature: gene Location: 2430803-2432065 bp Ori: AMM93032.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2431001-2431619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2431 001 -2431 61 9 bp Feature: domain Description: GIIM Note: maturase Location: 2431670-2431880 bp Feature: domain Description: GIIM Note: maturase Location: 2431 670-2431 880 bp Feature: gene Location: 2432234-2432461 bp Ori: AMM93033.1 Feature: domain Description: CcmA Location: 2432240-2432300 bp Feature: domain Description: CcmA Location: 2432240-2432300 bp Feature: gene Location: 2432549-2433793 bp Ori: AMM93034.1 Feature: domain Description: Beta-lactamase Location: 2432615-2433728 bp Feature: domain Description: Beta-lactamase Location: 243261 5-2433728 bp Feature: gene Location: 2438815-2439339 bp Ori: AMM93039.1 Feature: domain Description: AcrR Location: 2438824-2439103 bp Feature: domain Description: AcrR Location: 2438824-24391 03 bp Feature: gene Location: 2439430-2439852 bp Ori: AMM93040.1 Feature: domain Description: DUF3995 Location: 2439475-2439823 bp Feature: domain Description: DUF3995 Location: 2439475-2439823 bp Feature: gene Location: 2441257-2442519 bp Ori: AMM93041.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2441455-2442073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2441 455-2442073 bp Feature: domain Description: GIIM Note: maturase Location: 2442124-2442334 bp Feature: domain Description: GIIM Note: maturase Location: 24421 24-2442334 bp Feature: gene Location: 2442694-2443152 bp Ori: AMM93042.1 Feature: domain Description: XRE Location: 2442730-2442922 bp Feature: domain Description: XRE Location: 2442730-2442922 bp Feature: gene Location: 2443149-2443490 bp Feature: gene Location: 2915740-2916501 bp Ori: AMM95530.1 Feature: domain Description: PRK08213 Location: 2915743-2916493 bp Feature: domain Description: PRK0821 3 Location: 291 5743-291 6493 bp Feature: gene Location: 2916795-2917250 bp Ori: AMM93371.1 Feature: domain Description: perox_SACOL1771 Location: 2916807-2917218 bp Feature: domain Description: perox_SACOL1 771 Location: 291 6807-291 721 8 bp Feature: gene Location: 2917329-2918591 bp Ori: AMM93372.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2917527-2918145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 291 7527-291 81 45 bp Feature: domain Description: GIIM Note: maturase Location: 2918196-2918406 bp Feature: domain Description: GIIM Note: maturase Location: 291 81 96-291 8406 bp Feature: gene Location: 2919185-2919436 bp Ori: AMM93373.1 Feature: domain Description: PRK03094 Location: 2919188-2919422 bp Feature: domain Description: PRK03094 Location: 291 91 88-291 9422 bp Feature: gene Location: 2920052-2920243 bp Feature: gene Location: 3146449-3147033 bp Ori: AMM93539.1 Feature: domain Description: MdaB Location: 3146452-3147028 bp Feature: domain Description: MdaB Location: 31 46452-31 47028 bp Feature: gene Location: 3147502-3148125 bp Ori: AMM93540.1 Feature: domain Description: MhpD Location: 3147517-3148117 bp Feature: domain Description: MhpD Location: 31 4751 7-31 481 1 7 bp Feature: gene Location: 3149196-3149465 bp Ori: AMM93541.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3149259-3149436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 49259-31 49436 bp Feature: gene Location: 3149464-3149658 bp Feature: gene Location: 3149711-3151201 bp Ori: AMM93543.1 Feature: domain Description: PutP Location: 3149714-3151169 bp Feature: domain Description: PutP Location: 31 4971 4-31 51 1 69 bp Feature: gene Location: 3992549-3993811 bp Ori: AMM94250.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3992747-3993365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3992747-3993365 bp Feature: domain Description: GIIM Note: maturase Location: 3993416-3993626 bp Feature: domain Description: GIIM Note: maturase Location: 399341 6-3993626 bp Feature: gene Location: 3994437-3994847 bp Ori: AMM94251.1 Feature: domain Description: DUF4064 Location: 3994443-3994761 bp Feature: domain Description: DUF4064 Location: 3994443-3994761 bp Feature: gene Location: 3995207-3996481 bp Ori: AMM94252.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3995408-3996023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3995408-3996023 bp Feature: domain Description: GIIM Note: maturase Location: 3996083-3996293 bp Feature: domain Description: GIIM Note: maturase Location: 3996083-3996293 bp Feature: gene Location: 3997009-3998454 bp Ori: AMM94253.1 Feature: domain Description: PRK07168 Location: 3997018-3998275 bp Feature: domain Description: PRK071 68 Location: 399701 8-3998275 bp Feature: gene Location: 3998468-3999283 bp Ori: AMM94254.1 Feature: domain Description: hemD Location: 3998492-3999263 bp Feature: domain Description: hemD Location: 3998492-3999263 bp Feature: gene Location: 4240905-4241354 bp Ori: AMM94450.1 Feature: domain Description: Acetyltransf_10 Location: 4241043-4241340 bp Feature: domain Description: Acetyltransf_1 0 Location: 4241 043-4241 340 bp Feature: gene Location: 4241447-4241701 bp Feature: gene Location: 4241929-4243191 bp Ori: AMM94452.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4242127-4242745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42421 27-4242745 bp Feature: domain Description: GIIM Note: maturase Location: 4242796-4243006 bp Feature: domain Description: GIIM Note: maturase Location: 4242796-4243006 bp Feature: gene Location: 4243813-4244154 bp Ori: AMM94453.1 Feature: domain Description: TrHb1_N Location: 4243834-4244152 bp Feature: domain Description: TrHb1 _N Location: 4243834-42441 52 bp Feature: gene Location: 4244401-4245531 bp Ori: AMM94454.1 Feature: domain Description: YgiM Location: 4244419-4244719 bp Feature: domain Description: YgiM Location: 424441 9-424471 9 bp Feature: domain Description: LdcB Location: 4244818-4245499 bp Feature: domain Description: LdcB Location: 424481 8-4245499 bp Feature: gene Location: 4487506-4488756 bp Ori: AMM94633.1 Feature: domain Description: MFS_MT3072_like Location: 4487545-4488667 bp Feature: domain Description: MFS_MT3072_like Location: 4487545-4488667 bp Feature: gene Location: 4489179-4489619 bp Ori: AMM94634.1 Feature: domain Description: CwlJ Location: 4489185-4489599 bp Feature: domain Description: CwlJ Location: 44891 85-4489599 bp Feature: gene Location: 4489860-4491122 bp Ori: AMM94635.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4490058-4490676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4490058-4490676 bp Feature: domain Description: GIIM Note: maturase Location: 4490727-4490937 bp Feature: domain Description: GIIM Note: maturase Location: 4490727-4490937 bp Feature: gene Location: 4492439-4492849 bp Ori: AMM94636.1 Feature: domain Description: HTH_ASNC Location: 4492445-4492760 bp Feature: domain Description: HTH_ASNC Location: 4492445-4492760 bp Feature: gene Location: 4494230-4494679 bp Ori: AMM94637.1 Feature: domain Description: Acetyltransf_1 Location: 4494329-4494641 bp Feature: domain Description: Acetyltransf_1 Location: 4494329-4494641 bp Feature: gene Location: 4512873-4513697 bp Ori: AMM94653.1 Feature: domain Description: YmaE-like_MBL-fold Location: 4513062-4513593 bp Feature: domain Description: YmaE-like_MBL-fold Location: 451 3062-451 3593 bp Feature: gene Location: 4514070-4514510 bp Ori: AMM94654.1 Feature: domain Description: CoxG Location: 4514091-4514496 bp Feature: domain Description: CoxG Location: 451 4091 -451 4496 bp Feature: gene Location: 4515440-4516768 bp Ori: AMM94655.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4515695-4516388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 451 5695-451 6388 bp Feature: domain Description: GIIM Note: maturase Location: 4516478-4516676 bp Feature: domain Description: GIIM Note: maturase Location: 451 6478-451 6676 bp Feature: gene Location: 4517350-4517826 bp Ori: AMM94656.1 Feature: domain Description: UPF0158 Location: 4517368-4517818 bp Feature: domain Description: UPF01 58 Location: 451 7368-451 781 8 bp Feature: gene Location: 4518314-4518850 bp Feature: gene Location: 4530164-4530772 bp Ori: AMM94668.1 Feature: domain Description: AcrR Location: 4530197-4530422 bp Feature: domain Description: AcrR Location: 45301 97-4530422 bp Feature: domain Description: TetR_C_8 Location: 4530434-4530731 bp Feature: domain Description: TetR_C_8 Location: 4530434-4530731 bp Feature: gene Location: 4530963-4532144 bp Ori: AMM94669.1 Feature: domain Description: YhgE Location: 4530975-4531476 bp Feature: domain Description: YhgE Location: 4530975-4531 476 bp Feature: domain Description: pip_yhgE_Cterm Location: 4531497-4532097 bp Feature: domain Description: pip_yhgE_Cterm Location: 4531 497-4532097 bp Feature: gene Location: 4532506-4533768 bp Ori: AMM94670.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4532704-4533322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4532704-4533322 bp Feature: domain Description: GIIM Note: maturase Location: 4533373-4533583 bp Feature: domain Description: GIIM Note: maturase Location: 4533373-4533583 bp Feature: gene Location: 4535017-4535523 bp Feature: gene Location: 4535910-4537010 bp Ori: AMM94672.1 Feature: domain Description: DUF4179 Location: 4536102-4536333 bp Feature: domain Description: DUF41 79 Location: 45361 02-4536333 bp Feature: domain Description: DUF4030 Location: 4536594-4536999 bp Feature: domain Description: DUF4030 Location: 4536594-4536999 bp Feature: gene Location: 4543845-4544030 bp Feature: gene Location: 4544117-4546333 bp Ori: AMM94682.1 Feature: domain Description: YhgE Location: 4544123-4545305 bp Feature: domain Description: YhgE Location: 45441 23-4545305 bp Feature: domain Description: xxxLxxG_by_4 Location: 4545554-4545632 bp Feature: domain Description: xxxLxxG_by_4 Location: 4545554-4545632 bp Feature: domain Description: pip_yhgE_Cterm Location: 4545692-4546292 bp Feature: domain Description: pip_yhgE_Cterm Location: 4545692-4546292 bp Feature: gene Location: 4546869-4548197 bp Ori: AMM94683.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4547124-4547817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45471 24-454781 7 bp Feature: domain Description: GIIM Note: maturase Location: 4547907-4548105 bp Feature: domain Description: GIIM Note: maturase Location: 4547907-45481 05 bp Feature: gene Location: 4549896-4550384 bp Ori: AMM94684.1 Feature: domain Description: DUF2975 Location: 4549998-4550382 bp Feature: domain Description: DUF2975 Location: 4549998-4550382 bp Feature: gene Location: 4550395-4550613 bp Ori: AMM94685.1 Feature: domain Description: YozG Location: 4550398-4550608 bp Feature: domain Description: YozG Location: 4550398-4550608 bp Feature: gene Location: 4558242-4558802 bp Ori: AMM94689.1 Feature: domain Description: RimL Location: 4558281-4558638 bp Feature: domain Description: RimL Location: 4558281 -4558638 bp Feature: gene Location: 4559436-4560764 bp Ori: AMM94690.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4559691-4560384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4559691 -4560384 bp Feature: domain Description: GIIM Note: maturase Location: 4560474-4560672 bp Feature: domain Description: GIIM Note: maturase Location: 4560474-4560672 bp Feature: gene Location: 4561576-4562043 bp Feature: gene Location: 4562257-4562442 bp Feature: gene Location: 4571843-4572196 bp Feature: gene Location: 4573594-4574409 bp Ori: AMM94704.1 Feature: domain Description: Amj Location: 4573636-4574395 bp Feature: domain Description: Amj Location: 4573636-4574395 bp Feature: gene Location: 4574643-4575971 bp Ori: AMM94705.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4574898-4575591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4574898-4575591 bp Feature: domain Description: GIIM Note: maturase Location: 4575681-4575879 bp Feature: domain Description: GIIM Note: maturase Location: 4575681 -4575879 bp Feature: gene Location: 4576582-4577007 bp Feature: gene Location: 4576997-4577209 bp Ori: AMM94707.1 Feature: domain Description: XRE Location: 4577003-4577195 bp Feature: domain Description: XRE Location: 4577003-45771 95 bp Feature: gene Location: 4801710-4802480 bp Ori: AMM94875.1 Feature: domain Description: PRK10621 Location: 4801734-4802463 bp Feature: domain Description: PRK1 0621 Location: 4801 734-4802463 bp Feature: gene Location: 4802603-4803541 bp Ori: AMM94876.1 Feature: domain Description: PRK06197 Location: 4802609-4803512 bp Feature: domain Description: PRK061 97 Location: 4802609-480351 2 bp Feature: gene Location: 4804045-4805307 bp Ori: AMM94877.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4804243-4804861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4804243-4804861 bp Feature: domain Description: GIIM Note: maturase Location: 4804912-4805122 bp Feature: domain Description: GIIM Note: maturase Location: 480491 2-48051 22 bp Feature: gene Location: 4805898-4806338 bp Ori: AMM94878.1 Feature: domain Description: PpiB Location: 4805919-4806318 bp Feature: domain Description: PpiB Location: 480591 9-480631 8 bp Feature: gene Location: 4806500-4807492 bp Ori: AMM94879.1 Feature: domain Description: MDR_yhfp_like Location: 4806515-4807490 bp Feature: domain Description: MDR_yhfp_like Location: 480651 5-4807490 bp Feature: gene Location: 4817789-4819153 bp Ori: AMM95683.1 Feature: domain Description: PhoA Location: 4817846-4819148 bp Feature: domain Description: PhoA Location: 481 7846-481 91 48 bp Feature: gene Location: 4819207-4819389 bp Feature: gene Location: 4819557-4820819 bp Ori: AMM94892.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4819755-4820373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 481 9755-4820373 bp Feature: domain Description: GIIM Note: maturase Location: 4820424-4820634 bp Feature: domain Description: GIIM Note: maturase Location: 4820424-4820634 bp Feature: gene Location: 4821532-4822689 bp Ori: AMM94893.1 Gene: purT Feature: domain Description: PurT Location: 4821541-4822684 bp Feature: domain Description: PurT Location: 4821 541 -4822684 bp Feature: gene Location: 4823380-4824573 bp Ori: AMM94894.1 Feature: domain Description: LysM Location: 4823395-4823515 bp Feature: domain Description: LysM Location: 4823395-482351 5 bp Feature: domain Description: LysM Location: 4823539-4823665 bp Feature: domain Description: LysM Location: 4823539-4823665 bp Feature: domain Description: M14_Endopeptidase_I Location: 4823845-4824550 bp Feature: domain Description: M1 4_Endopeptidase_I Location: 4823845-4824550 bp Feature: gene Location: 4891369-4892157 bp Ori: AMM94954.1 Feature: domain Description: BtuF Location: 4891375-4892122 bp Feature: domain Description: BtuF Location: 4891 375-48921 22 bp Feature: gene Location: 4892222-4892917 bp Ori: AMM94955.1 Feature: domain Description: 3D Location: 4892459-4892786 bp Feature: domain Description: 3D Location: 4892459-4892786 bp Feature: gene Location: 4893079-4894341 bp Ori: AMM94956.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4893277-4893895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4893277-4893895 bp Feature: domain Description: GIIM Note: maturase Location: 4893946-4894156 bp Feature: domain Description: GIIM Note: maturase Location: 4893946-48941 56 bp Feature: gene Location: 4894932-4895249 bp Ori: AMM94957.1 Feature: domain Description: YuiB Location: 4894950-4895247 bp Feature: domain Description: YuiB Location: 4894950-4895247 bp Feature: gene Location: 4895358-4895837 bp Ori: AMM95688.1 Feature: domain Description: Nudix_Hydrolase_12 Location: 4895385-4895709 bp Feature: domain Description: Nudix_Hydrolase_1 2 Location: 4895385-4895709 bp Feature: gene Location: 5322212-5324182 bp Ori: AMM95295.1 Feature: domain Description: GdpP Location: 5322215-5324171 bp Feature: domain Description: GdpP Location: 532221 5-53241 71 bp Feature: gene Location: 5324221-5325168 bp Ori: AMM95296.1 Feature: domain Description: DUF2232 Location: 5324266-5325130 bp Feature: domain Description: DUF2232 Location: 5324266-53251 30 bp Feature: gene Location: 5325420-5326682 bp Ori: AMM95297.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5325618-5326236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 532561 8-5326236 bp Feature: domain Description: GIIM Note: maturase Location: 5326287-5326497 bp Feature: domain Description: GIIM Note: maturase Location: 5326287-5326497 bp Feature: gene Location: 5327275-5327514 bp Ori: AMM95298.1 Feature: domain Description: rpsR Location: 5327290-5327506 bp Feature: domain Description: rpsR Location: 5327290-5327506 bp Feature: gene Location: 5327562-5328092 bp Ori: AMM95299.1 Feature: domain Description: PRK06751 Location: 5327565-5328090 bp Feature: domain Description: PRK06751 Location: 5327565-5328090 bp Feature: gene Location: 5336893-5338779 bp Ori: AMM95310.1 Feature: domain Description: gidA Location: 5336917-5338756 bp Feature: domain Description: gidA Location: 533691 7-5338756 bp Feature: gene Location: 5338801-5340186 bp Ori: AMM95311.1 Feature: domain Description: MnmE Location: 5338807-5340184 bp Feature: domain Description: MnmE Location: 5338807-53401 84 bp Feature: gene Location: 5340557-5341819 bp Ori: AMM95312.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5340755-5341373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5340755-5341 373 bp Feature: domain Description: GIIM Note: maturase Location: 5341424-5341634 bp Feature: domain Description: GIIM Note: maturase Location: 5341 424-5341 634 bp Feature: gene Location: 5342402-5343022 bp Ori: AMM95313.1 Feature: domain Description: Jag Location: 5342414-5343014 bp Feature: domain Description: Jag Location: 534241 4-534301 4 bp Feature: gene Location: 5343019-5343807 bp Ori: AMM95314.1 Feature: domain Description: PRK02944 Location: 5343022-5343802 bp Feature: domain Description: PRK02944 Location: 5343022-5343802 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MdaB (COG2249), PadR (pfam03551), RVT-GII, GIIM (pfam08388), DacC (COG1686), HTH_YyaN (cd01109), DltE (COG3967), SDR_c (cd05233), RpoE (COG3343), Sigma_reg_N (pfam13800)
Sigma_reg_C (pfam13791), PHA02517 (putative transposase OrfB; Reviewed), AHL_lactonase_MBL-fold (cd07729), NIPSNAP (pfam07978), PRK12879 (3-oxoacyl-(acyl carrier protein) synthase III; Reviewed), YczE (COG2364), MarR (pfam01047), Acetyltransf_1 (pfam00583), PaiB (COG2808), Cupredoxin_like_3 (cd04203)
DUF1529 (pfam07485), COG3547 (Transposase ), HTH_BmrR (cd01107), BltR2 (COG4978), YqgA (COG1811), DUF4030 (pfam13222), Sig70_famx3 (TIGR02954), CcmA (COG4133), Beta-lactamase (pfam00144), AcrR (COG1309)
DUF3995 (pfam13160), XRE (COG1476), PRK08213 (gluconate 5-dehydrogenase; Provisional), perox_SACOL1771 (TIGR03563), PRK03094 (hypothetical protein; Provisional), MhpD (COG3971), PutP (COG0591), DUF4064 (pfam13273), PRK07168 (uroporphyrin-III C-methyltransferase), hemD (PRK05928)
Acetyltransf_10 (pfam13673), TrHb1_N (cd00454), YgiM (COG3103), LdcB (COG1876), MFS_MT3072_like (cd17475), CwlJ (COG3773), HTH_ASNC (smart00344), YmaE-like_MBL-fold (cd07727), CoxG (COG3427), UPF0158 (pfam03682)
TetR_C_8 (pfam14278), YhgE (COG1511), pip_yhgE_Cterm (TIGR03062), DUF4179 (pfam13786), xxxLxxG_by_4 (TIGR03057), DUF2975 (pfam11188), YozG (COG3655), RimL (COG1670), Amj (pfam10997), PRK10621 (hypothetical protein; Provisional)
PRK06197 (short chain dehydrogenase; Provisional), PpiB (COG0652), MDR_yhfp_like (cd08289), PhoA (COG1785), PurT (COG0027), LysM (smart00257), M14_Endopeptidase_I (cd06229), BtuF (cd01144), 3D (pfam06725), YuiB (pfam14068)
Nudix_Hydrolase_12 (cd04670), GdpP (COG3887), DUF2232 (pfam09991), rpsR (PRK00391), PRK06751 (single-stranded DNA-binding protein; Provisional), gidA (TIGR00136), MnmE (COG0486), Jag (COG1847), PRK02944 (YidC family membrane integrase SpoIIIJ)

Seq: CP011009.1 Bacillus simplex strain SH-B26 plasmid pSHB26, complete sequence (176219 bp)
Overview 1 RT 1: 11248-17825 bp 2 RT 2: 110783-117194 bp Neighborhood of RT #1 [11248, 17833] DUF4083 RVT-GII GIIM COG1237 NIPSNAP Neighborhood of RT #2 [110783, 117232] Bact_lectin DUF5011 DUF5011 DUF5011 RVT-GII GIIM DUF4030 RpoE Feature: gene Location: 11248-11436 bp Feature: gene Location: 12399-12590 bp Ori: AMM95842.1 Feature: domain Description: DUF4083 Location: 12420-12567 bp Feature: domain Description: DUF4083 Location: 12 42 0-12 567 bp Feature: gene Location: 13256-14584 bp Ori: AMM95730.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13511-14204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13511-142 04 bp Feature: domain Description: GIIM Note: maturase Location: 14294-14492 bp Feature: domain Description: GIIM Note: maturase Location: 142 94-14492 bp Feature: gene Location: 15307-16146 bp Ori: AMM95731.1 Feature: domain Description: COG1237 Location: 15310-16141 bp Feature: domain Description: COG12 37 Location: 15310-16141 bp Feature: gene Location: 17528-17833 bp Ori: AMM95732.1 Feature: domain Description: NIPSNAP Location: 17546-17825 bp Feature: domain Description: NIPSNAP Location: 17546-1782 5 bp Feature: gene Location: 110783-110974 bp Feature: gene Location: 111526-113424 bp Ori: AMM95852.1 Feature: domain Description: Bact_lectin Location: 111583-112234 bp Feature: domain Description: Bact_lectin Location: 111583-112 2 34 bp Feature: domain Description: DUF5011 Location: 112318-112483 bp Feature: domain Description: DUF5011 Location: 112 318-112 483 bp Feature: domain Description: DUF5011 Location: 112561-112729 bp Feature: domain Description: DUF5011 Location: 112 561-112 72 9 bp Feature: domain Description: DUF5011 Location: 112798-112954 bp Feature: domain Description: DUF5011 Location: 112 798-112 954 bp Feature: gene Location: 113709-115037 bp Ori: AMM95797.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113964-114657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113964-114657 bp Feature: domain Description: GIIM Note: maturase Location: 114747-114945 bp Feature: domain Description: GIIM Note: maturase Location: 114747-114945 bp Feature: gene Location: 115573-116664 bp Ori: AMM95798.1 Feature: domain Description: DUF4030 Location: 116257-116653 bp Feature: domain Description: DUF4030 Location: 1162 57-116653 bp Feature: gene Location: 116654-117232 bp Ori: AMM95799.1 Feature: domain Description: RpoE Location: 116669-117194 bp Feature: domain Description: RpoE Location: 116669-117194 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4083 (pfam13314), RVT-GII, GIIM (pfam08388), COG1237 (Metal-dependent hydrolase, beta-lactamase superfamily II ), NIPSNAP (pfam07978), Bact_lectin (pfam18483), DUF5011 (pfam16403), DUF4030 (pfam13222), RpoE (COG3343)