myRT

myRT report for GCA_001581875.1_ASM158187v1

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Seq: CP014643.1 Lysinibacillus sphaericus strain OT4b.25, complete genome (4665575 bp)
Overview 1 RT 1: 1926601-1933453 bp 2 RT 2: 3266542-3271759 bp Neighborhood of RT #1 [1926601, 1933453] A3DFK9-like_SDR_c RVT-GII HNHc Neighborhood of RT #2 [3266542, 3271764] HxlR DUF2798 DUF2798 RVT-GII HNHc RimL YbbK Feature: gene Location: 1926601-1927251 bp Feature: gene Location: 1927344-1928090 bp Ori: AMO32618.1 Feature: domain Description: A3DFK9-like_SDR_c Location: 1927359-1928082 bp Feature: domain Description: A3DFK9-like_SDR_c Location: 1 927359-1 928082 bp Feature: gene Location: 1929665-1931470 bp Ori: AMO32619.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1929962-1930661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 929962-1 930661 bp Feature: domain Description: HNHc Note: nucleases Location: 1931219-1931357 bp Feature: domain Description: HNHc Note: nucleases Location: 1 931 21 9-1 931 357 bp Feature: gene Location: 1932080-1932382 bp Feature: gene Location: 1932773-1933453 bp Feature: gene Location: 3266542-3266910 bp Feature: domain Description: HxlR Location: 3266587-3266887 bp Feature: domain Description: HxlR Location: 3266587-3266887 bp Feature: gene Location: 3267289-3267780 bp Ori: AMO33805.1 Feature: domain Description: DUF2798 Location: 3267328-3267505 bp Feature: domain Description: DUF2798 Location: 3267328-3267505 bp Feature: domain Description: DUF2798 Location: 3267559-3267742 bp Feature: domain Description: DUF2798 Location: 3267559-3267742 bp Feature: gene Location: 3267941-3269746 bp Ori: AMO33806.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3268238-3268937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3268238-3268937 bp Feature: domain Description: HNHc Note: nucleases Location: 3269495-3269633 bp Feature: domain Description: HNHc Note: nucleases Location: 3269495-3269633 bp Feature: gene Location: 3270640-3271167 bp Ori: AMO33807.1 Feature: domain Description: RimL Location: 3270652-3271159 bp Feature: domain Description: RimL Location: 3270652-3271 1 59 bp Feature: gene Location: 3271333-3271764 bp Ori: AMO33808.1 Feature: domain Description: YbbK Location: 3271336-3271759 bp Feature: domain Description: YbbK Location: 3271 336-3271 759 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT A3DFK9-like_SDR_c (cd09761), RVT-GII, HNHc (smart00507), HxlR (pfam01638), DUF2798 (pfam11391), RimL (COG1670), YbbK (COG1683)

Seq: CP014644.1 Lysinibacillus sphaericus strain OT4b.25 plasmid, complete sequence (176083 bp)
Overview 1 RT 1: 25282-29149 bp 2 RT 2: 35553-38367 bp Neighborhood of RT #1 [25282, 29149] AbrB RVT-GII HNHc Neighborhood of RT #2 [35553, 38480] RVT-GII HNHc Feature: gene Location: 25282-25578 bp Ori: AMO35312.1 Feature: domain Description: AbrB Location: 25285-25543 bp Feature: domain Description: AbrB Location: 2 52 85-2 5543 bp Feature: gene Location: 25709-25915 bp Feature: gene Location: 26029-27834 bp Ori: AMO35314.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26326-27025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 632 6-2 702 5 bp Feature: domain Description: HNHc Note: nucleases Location: 27583-27721 bp Feature: domain Description: HNHc Note: nucleases Location: 2 7583-2 772 1 bp Feature: gene Location: 28546-28773 bp Feature: gene Location: 28763-29149 bp Feature: gene Location: 35553-35732 bp Feature: gene Location: 36063-36548 bp Feature: gene Location: 36675-38480 bp Ori: AMO35330.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36972-37671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36972 -37671 bp Feature: domain Description: HNHc Note: nucleases Location: 38229-38367 bp Feature: domain Description: HNHc Note: nucleases Location: 382 2 9-38367 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbrB (pfam05145), RVT-GII, HNHc (smart00507)