myRT

myRT report for GCA_001584185.1_ASM158418v1

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Seq: CP013234.1 Collimonas pratensis strain Ter91, complete genome (5730025 bp)
Overview 1 RT 1: 3743630-3751757 bp 2 RT 2: 4390432-4397880 bp Neighborhood of RT #1 [3743630, 3752074] BID_2 BID_2 RVT_N RVT-GII GIIM RVT-GII GIIM HupE_UreJ_2 TPR YfgC Neighborhood of RT #2 [4390432, 4397880] int INT_Rci_Hp1_C RVT_N RVT-GII GIIM Feature: gene Location: 3743630-3743743 bp Feature: gene Location: 3744354-3746126 bp Ori: AMP05956.1 Feature: domain Description: BID_2 Location: 3744648-3744831 bp Feature: domain Description: BID_2 Location: 3744648-3744831 bp Feature: domain Description: BID_2 Location: 3744954-3745128 bp Feature: domain Description: BID_2 Location: 3744954-37451 28 bp Feature: gene Location: 3747302-3748759 bp Ori: AMP05957.1 Feature: domain Description: RVT_N Location: 3747353-3747590 bp Feature: domain Description: RVT_N Location: 3747353-3747590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3747641-3748283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3747641 -3748283 bp Feature: domain Description: GIIM Note: maturase Location: 3748337-3748568 bp Feature: domain Description: GIIM Note: maturase Location: 3748337-3748568 bp Feature: gene Location: 3748934-3749590 bp Ori: AMP05958.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3748946-3749114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3748946-37491 1 4 bp Feature: domain Description: GIIM Note: maturase Location: 3749168-3749399 bp Feature: domain Description: GIIM Note: maturase Location: 37491 68-3749399 bp Feature: gene Location: 3749722-3750846 bp Ori: AMP05959.1 Feature: domain Description: HupE_UreJ_2 Location: 3750265-3750745 bp Feature: domain Description: HupE_UreJ_2 Location: 3750265-3750745 bp Feature: gene Location: 3750881-3752074 bp Ori: AMP05960.1 Feature: domain Description: TPR Location: 3751211-3751484 bp Feature: domain Description: TPR Location: 3751 21 1 -3751 484 bp Feature: domain Description: YfgC Location: 3751517-3751757 bp Feature: domain Description: YfgC Location: 3751 51 7-3751 757 bp Feature: gene Location: 4390432-4390869 bp Feature: gene Location: 4391345-4392403 bp Ori: AMP06557.1 Feature: domain Description: int Location: 4391438-4391918 bp Feature: domain Description: int Location: 4391 438-4391 91 8 bp Feature: domain Description: INT_Rci_Hp1_C Location: 4391942-4392362 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 4391 942-4392362 bp Feature: gene Location: 4394169-4395626 bp Ori: AMP06558.1 Feature: domain Description: RVT_N Location: 4394220-4394457 bp Feature: domain Description: RVT_N Location: 4394220-4394457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4394508-4395150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4394508-43951 50 bp Feature: domain Description: GIIM Note: maturase Location: 4395204-4395435 bp Feature: domain Description: GIIM Note: maturase Location: 4395204-4395435 bp Feature: gene Location: 4396318-4397307 bp Feature: gene Location: 4397734-4397880 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BID_2 (smart00635), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HupE_UreJ_2 (pfam13795), TPR (smart00028), YfgC (COG4783), int (PHA02601), INT_Rci_Hp1_C (cd00796)