myRT

myRT report for GCA_001594325.2_ASM159432v2

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Seq: CP008858.2 Pseudomonas aeruginosa strain F63912, complete genome (6618768 bp)
Overview 1 RT 1: 1108427-1115237 bp 2 RT 2: 4654121-4657731 bp 3 RT 3: 5722016-5727629 bp Neighborhood of RT #1 [1108427, 1115434] ABC_phnC DUF772 RVT-GII GIIM CHD CHD Neighborhood of RT #2 [4654121, 4657731] DUF1566 Avd_like RVT-DGRs Neighborhood of RT #3 [5722016, 5727715] AAA_21 RVT-Retrons Methyltransf_11 PotE Feature: gene Location: 1108427-1109254 bp Ori: ALY49625.1 Feature: domain Description: ABC_phnC Location: 1108457-1109171 bp Feature: domain Description: ABC_phnC Location: 1 1 08457-1 1 091 71 bp Feature: gene Location: 1109597-1110107 bp Feature: domain Description: DUF772 Location: 1109747-1109942 bp Feature: domain Description: DUF772 Location: 1 1 09747-1 1 09942 bp Feature: gene Location: 1110627-1111895 bp Ori: ALY49623.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1110840-1111497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 0840-1 1 1 1 497 bp Feature: domain Description: GIIM Note: maturase Location: 1111575-1111797 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 1 1 575-1 1 1 1 797 bp Feature: gene Location: 1112045-1112371 bp Feature: gene Location: 1113890-1115434 bp Ori: ALY49622.1 Feature: domain Description: CHD Location: 1114106-1114520 bp Feature: domain Description: CHD Location: 1 1 1 41 06-1 1 1 4520 bp Feature: domain Description: CHD Location: 1114748-1115237 bp Feature: domain Description: CHD Location: 1 1 1 4748-1 1 1 5237 bp Feature: gene Location: 4654121-4654627 bp Ori: ALY46406.2 Feature: domain Description: DUF1566 Location: 4654289-4654613 bp Feature: domain Description: DUF1 566 Location: 4654289-465461 3 bp Feature: gene Location: 4654666-4655022 bp Ori: ALY46405.1 Feature: domain Description: Avd_like Location: 4654693-4654996 bp Feature: domain Description: Avd_like Location: 4654693-4654996 bp Feature: gene Location: 4655295-4656404 bp Ori: ALY46404.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4655472-4656225 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4655472-4656225 bp Feature: gene Location: 4656810-4657223 bp Feature: gene Location: 4657528-4657731 bp Feature: gene Location: 5722016-5722282 bp Feature: gene Location: 5722546-5723871 bp Ori: ARI45773.1 Feature: domain Description: AAA_21 Location: 5722627-5723290 bp Feature: domain Description: AAA_21 Location: 5722627-5723290 bp Feature: gene Location: 5723874-5724830 bp Ori: ARI45774.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5723991-5724546 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5723991 -5724546 bp Feature: gene Location: 5725606-5726223 bp Ori: ALY51421.1 Feature: domain Description: Methyltransf_11 Location: 5725744-5726038 bp Feature: domain Description: Methyltransf_1 1 Location: 5725744-5726038 bp Feature: gene Location: 5726318-5727715 bp Ori: ALY51420.1 Feature: domain Description: PotE Location: 5726321-5727629 bp Feature: domain Description: PotE Location: 5726321 -5727629 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABC_phnC (TIGR02315), DUF772 (pfam05598), RVT-GII, GIIM (pfam08388), CHD (cd07302), DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs, AAA_21 (pfam13304), RVT-Retrons
Methyltransf_11 (pfam08241), PotE (COG0531)