myRT

myRT report for GCA_001594345.1_ASM159434v1

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Seq: CP014452.1 Enterococcus faecium strain ATCC 700221 plasmid unnamed3, complete sequence (39138 bp)
Overview 1 RT 1: 23156-29281 bp Neighborhood of RT #1 [23156, 29286] Rve HsdM RVT-AbiP2 Tra8 PinE Feature: gene Location: 23156-23836 bp Ori: AMQ98812.1 Feature: domain Description: Rve Location: 23159-23807 bp Feature: domain Description: Rve Location: 231 59-23807 bp Feature: gene Location: 23862-25337 bp Feature: domain Description: HsdM Location: 23883-25308 bp Feature: domain Description: HsdM Location: 23883-25308 bp Feature: gene Location: 25675-27063 bp Ori: AMQ98813.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 25936-26401 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 25936-26401 bp Feature: gene Location: 27127-28080 bp Ori: AMQ98814.1 Feature: domain Description: Tra8 Location: 27130-28057 bp Feature: domain Description: Tra8 Location: 271 30-28057 bp Feature: gene Location: 28723-29286 bp Ori: AMQ98815.1 Feature: domain Description: PinE Location: 28735-29281 bp Feature: domain Description: PinE Location: 28735-29281 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), HsdM (COG0286), RVT-AbiP2, Tra8 (COG2826), PinE (COG1961)

Seq: CP014449.1 Enterococcus faecium strain ATCC 700221, complete genome (2859123 bp)
Overview 1 RT 1: 1805565-1812833 bp 2 RT 2: 2723735-2735256 bp Neighborhood of RT #1 [1805565, 1812833] PHP_HisPPase SMC_prok_B SMC_prok_B ArdA RVT-GII HTH_XRE Rol_Rep_N Rep_trans Neighborhood of RT #2 [2723735, 2735270] FtsK RVT-GII HNHc Zeta_toxin HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 1805565-1807412 bp Ori: AMQ97610.1 Feature: domain Description: PHP_HisPPase Location: 1805592-1806069 bp Feature: domain Description: PHP_HisPPase Location: 1805592 -1806069 bp Feature: domain Description: SMC_prok_B Location: 1806471-1806570 bp Feature: domain Description: SMC_prok_B Location: 1806471-1806570 bp Feature: domain Description: SMC_prok_B Location: 1806900-1807335 bp Feature: domain Description: SMC_prok_B Location: 1806900-1807335 bp Feature: gene Location: 1807509-1808009 bp Ori: AMQ97611.1 Feature: domain Description: ArdA Location: 1807527-1807998 bp Feature: domain Description: ArdA Location: 180752 7-1807998 bp Feature: gene Location: 1808350-1810259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1808683-1809070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1808683-1809070 bp Feature: gene Location: 1811139-1812323 bp Ori: AMQ97612.1 Feature: domain Description: HTH_XRE Location: 1811169-1811313 bp Feature: domain Description: HTH_XRE Location: 1811169-1811313 bp Feature: domain Description: Rol_Rep_N Location: 1811346-1811610 bp Feature: domain Description: Rol_Rep_N Location: 1811346-1811610 bp Feature: domain Description: Rep_trans Location: 1811634-1812246 bp Feature: domain Description: Rep_trans Location: 1811634-1812 2 46 bp Feature: gene Location: 1812579-1812833 bp Feature: gene Location: 2723735-2724862 bp Feature: domain Description: FtsK Location: 2724395-2724857 bp Feature: domain Description: FtsK Location: 2 72 4395-2 72 4857 bp Feature: gene Location: 2725246-2725476 bp Feature: gene Location: 2725595-2727454 bp Ori: AMQ98364.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2725904-2726645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 72 5904-2 72 6645 bp Feature: domain Description: HNHc Note: nucleases Location: 2727200-2727338 bp Feature: domain Description: HNHc Note: nucleases Location: 2 72 72 00-2 72 7338 bp Feature: gene Location: 2727548-2727787 bp Feature: gene Location: 2727865-2728539 bp Ori: AMQ98366.1 Feature: domain Description: Zeta_toxin Location: 2727964-2728447 bp Feature: domain Description: Zeta_toxin Location: 2 72 7964-2 72 8447 bp Feature: gene Location: 2729904-2730194 bp Feature: gene Location: 2730453-2731637 bp Ori: AMQ98370.1 Feature: domain Description: HTH_XRE Location: 2730483-2730627 bp Feature: domain Description: HTH_XRE Location: 2 730483-2 73062 7 bp Feature: domain Description: Rol_Rep_N Location: 2730660-2730924 bp Feature: domain Description: Rol_Rep_N Location: 2 730660-2 73092 4 bp Feature: domain Description: Rep_trans Location: 2730948-2731560 bp Feature: domain Description: Rep_trans Location: 2 730948-2 731560 bp Feature: gene Location: 2732517-2734427 bp Ori: AMQ98371.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2732850-2733588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 732 850-2 733588 bp Feature: domain Description: HNHc Note: nucleases Location: 2734143-2734308 bp Feature: domain Description: HNHc Note: nucleases Location: 2 734143-2 734308 bp Feature: gene Location: 2734503-2734754 bp Feature: gene Location: 2734767-2735270 bp Ori: AMQ98373.1 Feature: domain Description: ArdA Location: 2734785-2735256 bp Feature: domain Description: ArdA Location: 2 734785-2 7352 56 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHP_HisPPase (cd07432), SMC_prok_B (TIGR02168), ArdA (pfam07275), RVT-GII, HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), FtsK (COG1674), HNHc (smart00507), Zeta_toxin (pfam06414)