myRT

myRT report for GCA_001595725.1_ASM159572v1

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Seq: CP014284.1 Bacillus thuringiensis strain Bt185 plasmid pBT1850294, complete sequence (293705 bp)
Overview 1 RT 1: 87159-92134 bp 2 RT 2: 131454-138281 bp 3 RT 3: 189533-197066 bp 4 RT 4: 260201-264688 bp Neighborhood of RT #1 [87159, 93060] PHA02517 InsE RVT_N RVT-GII GIIM HNHc PDDEXK_2 HTH_11 Mga Neighborhood of RT #2 [131454, 138281] RVT_N RVT-GII GIIM HNH DEXHc_Snf DEXHc_Snf Neighborhood of RT #3 [189533, 197066] MPH2' TraG-D_C Ftsk_gamma Ftsk_gamma RVT-GII HNHc Neighborhood of RT #4 [260201, 264688] DDE_Tnp_1 RVT-GII GIIM Feature: gene Location: 87159-87974 bp Ori: AMR06146.1 Feature: domain Description: PHA02517 Location: 87183-87969 bp Feature: domain Description: PHA0251 7 Location: 871 83-87969 bp Feature: gene Location: 88013-88306 bp Ori: AMR06147.1 Feature: domain Description: InsE Location: 88022-88301 bp Feature: domain Description: InsE Location: 88022-88301 bp Feature: gene Location: 88474-90300 bp Ori: AMR06318.1 Feature: domain Description: RVT_N Location: 88522-88765 bp Feature: domain Description: RVT_N Location: 88522-88765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88822-89491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88822-89491 bp Feature: domain Description: GIIM Note: maturase Location: 89551-89785 bp Feature: domain Description: GIIM Note: maturase Location: 89551 -89785 bp Feature: domain Description: HNHc Note: nucleases Location: 89983-90151 bp Feature: domain Description: HNHc Note: nucleases Location: 89983-901 51 bp Feature: gene Location: 90877-91149 bp Ori: AMR06148.1 Feature: domain Description: PDDEXK_2 Location: 90907-91138 bp Feature: domain Description: PDDEXK_2 Location: 90907-91 1 38 bp Feature: gene Location: 91642-93060 bp Ori: AMR06149.1 Feature: domain Description: HTH_11 Location: 91690-91858 bp Feature: domain Description: HTH_1 1 Location: 91 690-91 858 bp Feature: domain Description: Mga Location: 91891-92134 bp Feature: domain Description: Mga Location: 91 891 -921 34 bp Feature: gene Location: 131454-132173 bp Feature: gene Location: 132190-132768 bp Feature: gene Location: 133014-134825 bp Ori: AMR06183.1 Feature: domain Description: RVT_N Location: 133068-133314 bp Feature: domain Description: RVT_N Location: 1 33068-1 3331 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 133368-134022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 33368-1 34022 bp Feature: domain Description: GIIM Note: maturase Location: 134085-134319 bp Feature: domain Description: GIIM Note: maturase Location: 1 34085-1 3431 9 bp Feature: domain Description: HNH Note: nucleases Location: 134559-134694 bp Feature: domain Description: HNH Note: nucleases Location: 1 34559-1 34694 bp Feature: gene Location: 135397-137982 bp Ori: AMR06184.1 Feature: domain Description: DEXHc_Snf Location: 136183-136546 bp Feature: domain Description: DEXHc_Snf Location: 1 361 83-1 36546 bp Feature: domain Description: DEXHc_Snf Location: 136984-137185 bp Feature: domain Description: DEXHc_Snf Location: 1 36984-1 371 85 bp Feature: gene Location: 138054-138281 bp Feature: gene Location: 189533-190432 bp Ori: AMR06225.1 Feature: domain Description: MPH2' Location: 189557-190376 bp Feature: domain Description: MPH2' Location: 1 89557-1 90376 bp Feature: gene Location: 190562-192784 bp Feature: domain Description: TraG-D_C Location: 190901-191258 bp Feature: domain Description: TraG-D_C Location: 1 90901 -1 91 258 bp Feature: domain Description: Ftsk_gamma Location: 191666-191846 bp Feature: domain Description: Ftsk_gamma Location: 1 91 666-1 91 846 bp Feature: domain Description: Ftsk_gamma Location: 191978-192119 bp Feature: domain Description: Ftsk_gamma Location: 1 91 978-1 921 1 9 bp Feature: gene Location: 192886-194676 bp Ori: AMR06226.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 193183-193879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 931 83-1 93879 bp Feature: domain Description: HNHc Note: nucleases Location: 194419-194551 bp Feature: domain Description: HNHc Note: nucleases Location: 1 9441 9-1 94551 bp Feature: gene Location: 195388-196662 bp Feature: gene Location: 196680-197066 bp Feature: gene Location: 260201-261220 bp Feature: domain Description: DDE_Tnp_1 Location: 260561-261218 bp Feature: domain Description: DDE_Tnp_1 Location: 260561 -261 21 8 bp Feature: gene Location: 261411-261590 bp Feature: gene Location: 261764-263071 bp Ori: AMR06288.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 262049-262688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 262049-262688 bp Feature: domain Description: GIIM Note: maturase Location: 262763-262988 bp Feature: domain Description: GIIM Note: maturase Location: 262763-262988 bp Feature: gene Location: 263311-263613 bp Feature: gene Location: 264170-264688 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PDDEXK_2 (pfam12784), HTH_11 (pfam08279), Mga (pfam05043), HNH (pfam01844)
DEXHc_Snf (cd17919), MPH2' (cd05152), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), DDE_Tnp_1 (pfam01609)

Seq: CP014283.1 Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence (635508 bp)
Overview 1 RT 1: 305192-320680 bp Neighborhood of RT #1 [305192, 320680] TraG-D_C Ftsk_gamma Ftsk_gamma RVT-GII GIIM RVT-GII Intron_maturas2 HNHc RVT-GII HNHc RVT-GII Intron_maturas2 HNHc Feature: gene Location: 305192-306171 bp Feature: gene Location: 306427-308130 bp Feature: domain Description: TraG-D_C Location: 306442-306760 bp Feature: domain Description: TraG-D_C Location: 306442 -306760 bp Feature: domain Description: Ftsk_gamma Location: 307120-307300 bp Feature: domain Description: Ftsk_gamma Location: 30712 0-307300 bp Feature: domain Description: Ftsk_gamma Location: 307453-307603 bp Feature: domain Description: Ftsk_gamma Location: 307453-307603 bp Feature: gene Location: 308359-310233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 308659-309364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 308659-309364 bp Feature: domain Description: GIIM Note: maturase Location: 309478-309646 bp Feature: domain Description: GIIM Note: maturase Location: 309478-309646 bp Feature: gene Location: 311215-313032 bp Ori: AMR05848.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 311485-312310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 311485-312 310 bp Feature: domain Description: Intron_maturas2 Location: 312391-312682 bp Feature: domain Description: Intron_maturas2 Location: 312 391-312 682 bp Feature: domain Description: HNHc Note: nucleases Location: 312829-313006 bp Feature: domain Description: HNHc Note: nucleases Location: 312 82 9-313006 bp Feature: gene Location: 313624-313893 bp Feature: gene Location: 313959-315749 bp Ori: AMR05850.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 314256-314952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3142 56-314952 bp Feature: domain Description: HNHc Note: nucleases Location: 315492-315624 bp Feature: domain Description: HNHc Note: nucleases Location: 315492 -31562 4 bp Feature: gene Location: 316716-318026 bp Ori: AMR06094.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 316719-317301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 316719-317301 bp Feature: domain Description: Intron_maturas2 Location: 317373-317676 bp Feature: domain Description: Intron_maturas2 Location: 317373-317676 bp Feature: domain Description: HNHc Note: nucleases Location: 317841-317997 bp Feature: domain Description: HNHc Note: nucleases Location: 317841-317997 bp Feature: gene Location: 319125-320276 bp Feature: gene Location: 320294-320680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT-GII, GIIM (pfam08388), Intron_maturas2 (pfam01348), HNHc (smart00507)