myRT

myRT report for GCA_001611015.1_ASM161101v1

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Seq: CP013349.1 Paraburkholderia caribensis strain Bcrs1W chromosome 3, complete sequence (2576584 bp)
Overview 1 RT 1: 1725358-1728744 bp Neighborhood of RT #1 [1725358, 1728744] RVT-GII Aes Feature: gene Location: 1725358-1725780 bp Ori: AMV48304.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1725709-1725763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 725709-1 725763 bp Feature: gene Location: 1726098-1726478 bp Ori: AMV48305.1 Feature: domain Description: Aes Location: 1726272-1726455 bp Feature: domain Description: Aes Location: 1 726272-1 726455 bp Feature: gene Location: 1727539-1728744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Aes (COG0657)

Seq: CP013348.1 Paraburkholderia caribensis strain Bcrs1W chromosome 2, complete sequence (3049409 bp)
Overview 1 RT 1: 117953-123860 bp Neighborhood of RT #1 [117953, 125035] AcrR RVT-GII Mrr_cat DEXDc Helicase_C_2 Feature: gene Location: 117953-118501 bp Ori: AMV44329.1 Feature: domain Description: AcrR Location: 117992-118289 bp Feature: domain Description: AcrR Location: 117992 -1182 89 bp Feature: gene Location: 119905-120102 bp Feature: gene Location: 120193-120780 bp Ori: AMV44331.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120226-120412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 02 2 6-12 0412 bp Feature: gene Location: 121351-122181 bp Ori: AMV44332.1 Feature: domain Description: Mrr_cat Location: 121396-121726 bp Feature: domain Description: Mrr_cat Location: 12 1396-12 172 6 bp Feature: gene Location: 122447-125035 bp Ori: AMV44333.1 Feature: domain Description: DEXDc Location: 122528-123329 bp Feature: domain Description: DEXDc Location: 12 2 52 8-12 332 9 bp Feature: domain Description: Helicase_C_2 Location: 123491-123860 bp Feature: domain Description: Helicase_C_2 Location: 12 3491-12 3860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), RVT-GII, Mrr_cat (pfam04471), DEXDc (smart00487), Helicase_C_2 (pfam13307)

Seq: CP013347.1 Paraburkholderia caribensis strain Bcrs1W chromosome 1, complete sequence (3694000 bp)
Overview 1 RT 1: 1088905-1096967 bp Neighborhood of RT #1 [1088905, 1096984] PRK00529 EarP RVT_N RVT-GII GIIM HNHc uvrC PRK10832 Feature: gene Location: 1088905-1089462 bp Ori: AMV42017.1 Feature: domain Description: PRK00529 Location: 1088908-1089460 bp Feature: domain Description: PRK00529 Location: 1088908-1089460 bp Feature: gene Location: 1089831-1091012 bp Ori: AMV42018.1 Feature: domain Description: EarP Location: 1089879-1090995 bp Feature: domain Description: EarP Location: 1089879-1090995 bp Feature: gene Location: 1092208-1093908 bp Ori: AMV42019.1 Feature: domain Description: RVT_N Location: 1092265-1092508 bp Feature: domain Description: RVT_N Location: 1092265-1092508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1092553-1093201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1092553 -1093 201 bp Feature: domain Description: GIIM Note: maturase Location: 1093255-1093486 bp Feature: domain Description: GIIM Note: maturase Location: 1093 255-1093 486 bp Feature: domain Description: HNHc Note: nucleases Location: 1093717-1093870 bp Feature: domain Description: HNHc Note: nucleases Location: 1093 717-1093 870 bp Feature: gene Location: 1094061-1096283 bp Ori: AMV42020.1 Feature: domain Description: uvrC Location: 1094151-1096281 bp Feature: domain Description: uvrC Location: 1094151-1096281 bp Feature: gene Location: 1096394-1096984 bp Ori: AMV42021.1 Feature: domain Description: PRK10832 Location: 1096397-1096967 bp Feature: domain Description: PRK1083 2 Location: 10963 97-1096967 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00529 (elongation factor P; Validated), EarP (TIGR03837), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), uvrC (TIGR00194), PRK10832 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase)