myRT

myRT report for GCA_001618905.1_ASM161890v1

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Seq: CP014786.1 Lactobacillus reuteri strain ZLR003 chromosome, complete genome (2234097 bp)
Overview 1 RT 1: 30497-35484 bp 2 RT 2: 434594-439578 bp 3 RT 3: 462683-469150 bp Neighborhood of RT #1 [30497, 35552] COG3464 RVT-UG2 Tra8 polys_exp_MPA1 Neighborhood of RT #2 [434594, 439586] CdsA PRK14830 RVT-GII GIIM frr AAK_UMPK-PyrH-Ec Neighborhood of RT #3 [462683, 469161] obgE UvrC RVT-GII GIIM NTP-PPase_u4 engB Feature: gene Location: 30497-30685 bp Feature: gene Location: 30773-31444 bp Feature: domain Description: COG3464 Location: 30818-31406 bp Feature: domain Description: COG3464 Location: 3081 8-31 406 bp Feature: gene Location: 31847-33343 bp Ori: AMY13061.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 32051-32888 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 32051 -32888 bp Feature: gene Location: 33479-34609 bp Ori: AMY13062.1 Feature: domain Description: Tra8 Location: 33533-34550 bp Feature: domain Description: Tra8 Location: 33533-34550 bp Feature: gene Location: 34779-35552 bp Ori: AMY13063.1 Feature: domain Description: polys_exp_MPA1 Location: 34794-35484 bp Feature: domain Description: polys_exp_MPA1 Location: 34794-35484 bp Feature: gene Location: 434594-435379 bp Ori: AMY13408.1 Feature: domain Description: CdsA Location: 434597-435371 bp Feature: domain Description: CdsA Location: 434597-435371 bp Feature: gene Location: 435399-436178 bp Ori: AMY15021.1 Feature: domain Description: PRK14830 Location: 435420-436167 bp Feature: domain Description: PRK1 4830 Location: 435420-4361 67 bp Feature: gene Location: 436417-437799 bp Ori: AMY13409.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 436735-437353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 436735-437353 bp Feature: domain Description: GIIM Note: maturase Location: 437407-437635 bp Feature: domain Description: GIIM Note: maturase Location: 437407-437635 bp Feature: gene Location: 438296-438859 bp Ori: AMY13410.1 Feature: domain Description: frr Location: 438311-438854 bp Feature: domain Description: frr Location: 43831 1 -438854 bp Feature: gene Location: 438864-439586 bp Ori: AMY13411.1 Gene: pyrH Feature: domain Description: AAK_UMPK-PyrH-Ec Location: 438885-439578 bp Feature: domain Description: AAK_UMPK-PyrH-Ec Location: 438885-439578 bp Feature: gene Location: 462683-463999 bp Ori: AMY13438.1 Gene: obgE Feature: domain Description: obgE Location: 462692-463994 bp Feature: domain Description: obgE Location: 462692-463994 bp Feature: gene Location: 464064-465875 bp Ori: AMY13439.1 Feature: domain Description: UvrC Location: 464076-465825 bp Feature: domain Description: UvrC Location: 464076-465825 bp Feature: gene Location: 466240-467622 bp Ori: AMY13440.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466558-467176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466558-4671 76 bp Feature: domain Description: GIIM Note: maturase Location: 467230-467458 bp Feature: domain Description: GIIM Note: maturase Location: 467230-467458 bp Feature: gene Location: 468270-468569 bp Ori: AMY13441.1 Feature: domain Description: NTP-PPase_u4 Location: 468285-468543 bp Feature: domain Description: NTP-PPase_u4 Location: 468285-468543 bp Feature: gene Location: 468571-469161 bp Ori: AMY13442.1 Feature: domain Description: engB Location: 468574-469150 bp Feature: domain Description: engB Location: 468574-4691 50 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3464 (Transposase ), RVT-UG2, Tra8 (COG2826), polys_exp_MPA1 (TIGR01006), CdsA (COG0575), PRK14830 (undecaprenyl pyrophosphate synthase; Provisional), RVT-GII, GIIM (pfam08388), frr (TIGR00496), AAK_UMPK-PyrH-Ec (cd04254)
obgE (PRK12299), UvrC (COG0322), NTP-PPase_u4 (cd11541), engB (PRK00454)