myRT

myRT report for GCA_001632765.1_ASM163276v1

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Seq: CP015345.1 Alteromonas stellipolaris strain PQQ-42, complete genome (4755740 bp)
Overview 1 RT 1: 3343172-3351683 bp 2 RT 2: 3668096-3671819 bp Neighborhood of RT #1 [3343172, 3351976] Phage_int_SAM_4 PinE RVT-UG8 RVT-UG3 PRK09692 OYE_like_2_FMN Neighborhood of RT #2 [3668096, 3671819] RVT-Retrons Feature: gene Location: 3343172-3344229 bp Feature: domain Description: Phage_int_SAM_4 Location: 3343229-3343463 bp Feature: domain Description: Phage_int_SAM_4 Location: 3343229-3343463 bp Feature: gene Location: 3344394-3344960 bp Ori: ANB23632.1 Feature: domain Description: PinE Location: 3344397-3344958 bp Feature: domain Description: PinE Location: 3344397-3344958 bp Feature: gene Location: 3345209-3347221 bp Ori: ANB22312.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3345725-3346175 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3345725-33461 75 bp Feature: gene Location: 3347215-3348465 bp Ori: ANB22313.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3347497-3347986 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3347497-3347986 bp Feature: gene Location: 3348765-3350006 bp Ori: ANB23633.1 Feature: domain Description: PRK09692 Location: 3348768-3349998 bp Feature: domain Description: PRK09692 Location: 3348768-3349998 bp Feature: gene Location: 3350600-3351976 bp Ori: ANB23634.1 Feature: domain Description: OYE_like_2_FMN Location: 3350684-3351683 bp Feature: domain Description: OYE_like_2_FMN Location: 3350684-3351 683 bp Feature: gene Location: 3668096-3668323 bp Feature: gene Location: 3668334-3668780 bp Feature: gene Location: 3669092-3670024 bp Ori: ANB22557.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3669191-3669782 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36691 91 -3669782 bp Feature: gene Location: 3670021-3670986 bp Feature: gene Location: 3671334-3671819 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_4 (pfam13495), PinE (COG1961), RVT-UG8, RVT-UG3, PRK09692 (Integrase; provisional), OYE_like_2_FMN (cd04733), RVT-Retrons