myRT

myRT report for GCA_001634285.1_ASM163428v1

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Seq: CP015439.1 Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence (258230 bp)
Overview 1 RT 1: 69897-74742 bp Neighborhood of RT #1 [69897, 74792] HTH_MerR-SF InsQ COG3666 RVT-GII GIIM DDE_Tnp_1_6 R_hydratase Feature: gene Location: 69897-70535 bp Ori: ANB62292.1 Feature: domain Description: HTH_MerR-SF Location: 69909-70002 bp Feature: domain Description: HTH_MerR-SF Location: 69909-70002 bp Feature: domain Description: InsQ Location: 70002-70509 bp Feature: domain Description: InsQ Location: 70002-70509 bp Feature: gene Location: 70774-71226 bp Ori: ANB62335.1 Feature: domain Description: COG3666 Location: 70801-71218 bp Feature: domain Description: COG3666 Location: 70801 -71 21 8 bp Feature: gene Location: 71292-72551 bp Ori: ANB62208.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71490-72108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 490-721 08 bp Feature: domain Description: GIIM Note: maturase Location: 72159-72369 bp Feature: domain Description: GIIM Note: maturase Location: 721 59-72369 bp Feature: gene Location: 73178-74212 bp Ori: ANB62284.1 Feature: domain Description: DDE_Tnp_1_6 Location: 73805-74174 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 73805-741 74 bp Feature: gene Location: 74322-74792 bp Ori: ANB62074.1 Feature: domain Description: R_hydratase Location: 74364-74742 bp Feature: domain Description: R_hydratase Location: 74364-74742 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_MerR-SF (cl02600), InsQ (COG0675), COG3666 (Transposase ), RVT-GII, GIIM (pfam08388), DDE_Tnp_1_6 (pfam13751), R_hydratase (cd03449)

Seq: CP015438.1 Anoxybacillus amylolyticus strain DSM 15939 chromosome, complete genome (2834744 bp)
Overview 1 RT 1: 409989-416623 bp 2 RT 2: 760964-765372 bp 3 RT 3: 909406-915389 bp 4 RT 4: 1506199-1512036 bp 5 RT 5: 2560144-2564556 bp 6 RT 6: 2769267-2778205 bp Neighborhood of RT #1 [409989, 416649] AcrR MFS_Azr1_MDR_like RVT-GII GIIM COG3564 ALDH_ACDHII-AcoD Neighborhood of RT #2 [760964, 765372] BclA_C BaeS RVT-GII GIIM PspA PspA PspA Neighborhood of RT #3 [909406, 915400] CBS_pair_HRP1_like PGM2 RVT-GII GIIM COG4585 CitB Neighborhood of RT #4 [1506199, 1512062] DHDPS RnjA RVT-GII GIIM ClpP YlzJ Neighborhood of RT #5 [2560144, 2564561] PRK05339 HTH_11 CBS_pair_CcpN RVT-GII GIIM reco YqzL Neighborhood of RT #6 [2769267, 2778216] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C DDE_Tnp_1 RVT-GII GIIM engB Lon Feature: gene Location: 409989-410897 bp Ori: ANB60013.1 Feature: domain Description: AcrR Location: 410001-410619 bp Feature: domain Description: AcrR Location: 410001-410619 bp Feature: gene Location: 410908-412485 bp Ori: ANB59903.1 Feature: domain Description: MFS_Azr1_MDR_like Location: 410953-412435 bp Feature: domain Description: MFS_Azr1_MDR_like Location: 410953-412 435 bp Feature: gene Location: 413079-414338 bp Ori: ANB61442.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 413277-413895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4132 77-413895 bp Feature: domain Description: GIIM Note: maturase Location: 413946-414156 bp Feature: domain Description: GIIM Note: maturase Location: 413946-414156 bp Feature: gene Location: 414744-415073 bp Ori: ANB60648.1 Feature: domain Description: COG3564 Location: 414747-415068 bp Feature: domain Description: COG3564 Location: 414747-415068 bp Feature: gene Location: 415129-416649 bp Ori: ANB61237.1 Feature: domain Description: ALDH_ACDHII-AcoD Location: 415186-416623 bp Feature: domain Description: ALDH_ACDHII-AcoD Location: 415186-41662 3 bp Feature: gene Location: 760964-761497 bp Ori: ANB59667.1 Feature: domain Description: BclA_C Location: 761108-761465 bp Feature: domain Description: BclA_C Location: 761108-761465 bp Feature: gene Location: 761498-762178 bp Ori: ANB61664.1 Feature: domain Description: BaeS Location: 761510-762173 bp Feature: domain Description: BaeS Location: 761510-762 173 bp Feature: gene Location: 762765-764024 bp Ori: ANB61598.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762963-763581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762 963-763581 bp Feature: domain Description: GIIM Note: maturase Location: 763632-763842 bp Feature: domain Description: GIIM Note: maturase Location: 763632 -763842 bp Feature: gene Location: 764090-764755 bp Ori: ANB60707.1 Feature: domain Description: PspA Location: 764123-764285 bp Feature: domain Description: PspA Location: 76412 3-7642 85 bp Feature: domain Description: PspA Location: 764294-764432 bp Feature: domain Description: PspA Location: 7642 94-764432 bp Feature: domain Description: PspA Location: 764465-764576 bp Feature: domain Description: PspA Location: 764465-764576 bp Feature: gene Location: 764986-765372 bp Feature: gene Location: 909406-909840 bp Ori: ANB62033.1 Feature: domain Description: CBS_pair_HRP1_like Location: 909436-909769 bp Feature: domain Description: CBS_pair_HRP1_like Location: 909436-909769 bp Feature: gene Location: 909915-911708 bp Ori: ANB59708.1 Gene: pgcA Feature: domain Description: PGM2 Location: 910086-911655 bp Feature: domain Description: PGM2 Location: 910086-911655 bp Feature: gene Location: 912310-913569 bp Ori: ANB60970.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 912508-913126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 912 508-91312 6 bp Feature: domain Description: GIIM Note: maturase Location: 913177-913387 bp Feature: domain Description: GIIM Note: maturase Location: 913177-913387 bp Feature: gene Location: 913665-914777 bp Ori: ANB59581.1 Feature: domain Description: COG4585 Location: 913926-914754 bp Feature: domain Description: COG4585 Location: 91392 6-914754 bp Feature: gene Location: 914774-915400 bp Ori: ANB61534.1 Feature: domain Description: CitB Location: 914780-915389 bp Feature: domain Description: CitB Location: 914780-915389 bp Feature: gene Location: 1506199-1507071 bp Ori: ANB60845.1 Gene: dapA Feature: domain Description: DHDPS Location: 1506211-1507054 bp Feature: domain Description: DHDPS Location: 15062 11-1507054 bp Feature: gene Location: 1507449-1509104 bp Ori: ANB61164.1 Gene: rnjB Feature: domain Description: RnjA Location: 1507467-1509096 bp Feature: domain Description: RnjA Location: 1507467-1509096 bp Feature: gene Location: 1509200-1510459 bp Ori: ANB59628.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1509398-1510016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1509398-1510016 bp Feature: domain Description: GIIM Note: maturase Location: 1510067-1510277 bp Feature: domain Description: GIIM Note: maturase Location: 1510067-15102 77 bp Feature: gene Location: 1511107-1511841 bp Ori: ANB60950.1 Feature: domain Description: ClpP Location: 1511182-1511794 bp Feature: domain Description: ClpP Location: 1511182 -1511794 bp Feature: gene Location: 1511838-1512062 bp Ori: ANB60491.1 Feature: domain Description: YlzJ Location: 1511847-1512036 bp Feature: domain Description: YlzJ Location: 1511847-1512 036 bp Feature: gene Location: 2560144-2560941 bp Ori: ANB61365.1 Feature: domain Description: PRK05339 Location: 2560150-2560930 bp Feature: domain Description: PRK05339 Location: 2 560150-2 560930 bp Feature: gene Location: 2560954-2561589 bp Ori: ANB61104.1 Gene: ccpN Feature: domain Description: HTH_11 Location: 2560978-2561134 bp Feature: domain Description: HTH_11 Location: 2 560978-2 561134 bp Feature: domain Description: CBS_pair_CcpN Location: 2561197-2561566 bp Feature: domain Description: CBS_pair_CcpN Location: 2 561197-2 561566 bp Feature: gene Location: 2561784-2563043 bp Ori: ANB61093.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2561982-2562600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 561982 -2 562 600 bp Feature: domain Description: GIIM Note: maturase Location: 2562651-2562861 bp Feature: domain Description: GIIM Note: maturase Location: 2 562 651-2 562 861 bp Feature: gene Location: 2563635-2564390 bp Ori: ANB61024.1 Gene: recO Feature: domain Description: reco Location: 2563647-2564364 bp Feature: domain Description: reco Location: 2 563647-2 564364 bp Feature: gene Location: 2564421-2564561 bp Ori: ANB61430.1 Feature: domain Description: YqzL Location: 2564430-2564556 bp Feature: domain Description: YqzL Location: 2 564430-2 564556 bp Feature: gene Location: 2769267-2770883 bp Ori: ANB59274.1 Feature: domain Description: LZ_Tnp_IS66 Location: 2769411-2769621 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2 769411-2 76962 1 bp Feature: domain Description: zf-IS66 Location: 2769645-2769777 bp Feature: domain Description: zf-IS66 Location: 2 769645-2 769777 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2769840-2770695 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 769840-2 770695 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2770713-2770833 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2 770713-2 770833 bp Feature: gene Location: 2771922-2773253 bp Ori: ANB60212.1 Feature: domain Description: DDE_Tnp_1 Location: 2772270-2773011 bp Feature: domain Description: DDE_Tnp_1 Location: 2 772 2 70-2 773011 bp Feature: gene Location: 2773407-2774666 bp Ori: ANB61377.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2773605-2774223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 773605-2 7742 2 3 bp Feature: domain Description: GIIM Note: maturase Location: 2774274-2774484 bp Feature: domain Description: GIIM Note: maturase Location: 2 7742 74-2 774484 bp Feature: gene Location: 2775314-2775895 bp Ori: ANB60336.1 Gene: ysxC Feature: domain Description: engB Location: 2775317-2775890 bp Feature: domain Description: engB Location: 2 775317-2 775890 bp Feature: gene Location: 2775892-2778216 bp Ori: ANB59616.1 Gene: lon Feature: domain Description: Lon Location: 2775904-2778205 bp Feature: domain Description: Lon Location: 2 775904-2 7782 05 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), MFS_Azr1_MDR_like (cd17502), RVT-GII, GIIM (pfam08388), COG3564 (Uncharacterized conserved protein, DUF779 family ), ALDH_ACDHII-AcoD (cd07116), BclA_C (pfam18573), BaeS (COG0642), PspA (COG1842), CBS_pair_HRP1_like (cd04622)
PGM2 (cd05799), COG4585 (Signal transduction histidine kinase ), CitB (TIGR02484), DHDPS (pfam00701), RnjA (COG0595), ClpP (COG0740), YlzJ (pfam14035), PRK05339 (pyruvate, phosphate dikinase/phosphoenolpyruvate synthase regulator), HTH_11 (pfam08279), CBS_pair_CcpN (cd04617)
reco (TIGR00613), YqzL (pfam14006), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), DDE_Tnp_1 (pfam01609), engB (PRK00454), Lon (COG0466)