myRT

myRT report for GCA_001634365.1_ASM163436v1

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Seq: CP014579.1 (3497621 bp) Associated domains: NACHT (pfam05729), RVT-Retrons, ApeA_NTD1 (pfam18862), Histone_HNS (pfam00816), SIR2-like (cd01406), AAA_18 (pfam13238), Nuc_deoxyrib_tr (pfam05014), RVT-UG7, HTH_MARR (smart00347), IclR (pfam01614)
RVT-GII, GIIM (pfam08388), adk (TIGR01351), InsE (COG2963), COG3547 (Transposase ), DDE_Tnp_1_2 (pfam13586), INT_tnpB_C_Tn554 (cd01187), TnpB_IS66 (pfam05717), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188)
LysR (COG0583), RVT_N (pfam13655), HNHc (smart00507), INT_RitB_C_like (cd00797), YgfH_subfam (TIGR03458), OmpR (COG0745), EGL9 (COG3751)

Seq: CP014578.1 (4646070 bp) Associated domains: COG3547 (Transposase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), COG5615 (Uncharacterized membrane protein ), Chromate_transp (pfam02417), HemolysinCabind (pfam00353), HCBP_related (pfam06594), type_I_sec_HlyB (TIGR01846), Arabinose_bd (pfam12625)
HTH_ARAC (smart00342), CzcO (COG2072), dcm (TIGR00675), COG3369 (Uncharacterized protein, contains Zn-finger domain of CDGSH type ), PRK03910 (D-cysteine desulfhydrase; Validated), IS5 (COG3039), DUF772 (pfam05598), DDE_Tnp_1_assoc (pfam13808), YhhI (COG5433), DUF3579 (pfam12112)
HNHc (smart00507), PRK00779 (ornithine carbamoyltransferase; Provisional), PLN00200 (argininosuccinate synthase; Provisional)

Seq: CP014580.1 (271008 bp) Associated domains: Tra5 (COG2801), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), TnpB_IS66 (pfam05717), HTH_32 (pfam13565), HTH_Tnp_1 (pfam01527)
CMD (pfam02627)