myRT

myRT report for GCA_001640865.1_ASM164086v1

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Seq: CP011531.1 Bacteroides dorei CL03T12C01, complete genome (5310365 bp)
Overview 1 RT 1: 4149332-4157902 bp 2 RT 2: 4880365-4885202 bp Neighborhood of RT #1 [4149332, 4158369] DUF4134 DUF4133 RVT_N RVT-GII GIIM RVT-GII Intron_maturas2 HNHc DUF3876 DUF4141 Neighborhood of RT #2 [4880365, 4885202] RVT-DGRs Feature: gene Location: 4149332-4149634 bp Ori: AND20793.1 Feature: domain Description: DUF4134 Location: 4149362-4149629 bp Feature: domain Description: DUF41 34 Location: 41 49362-41 49629 bp Feature: gene Location: 4149655-4149981 bp Ori: AND21995.1 Feature: domain Description: DUF4133 Location: 4149673-4149940 bp Feature: domain Description: DUF41 33 Location: 41 49673-41 49940 bp Feature: gene Location: 4150830-4152506 bp Ori: AND21996.1 Feature: domain Description: RVT_N Location: 4150884-4151127 bp Feature: domain Description: RVT_N Location: 41 50884-41 51 1 27 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4151172-4151820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 51 1 72-41 51 820 bp Feature: domain Description: GIIM Note: maturase Location: 4151871-4152105 bp Feature: domain Description: GIIM Note: maturase Location: 41 51 871 -41 521 05 bp Feature: gene Location: 4153996-4154496 bp Feature: gene Location: 4154504-4156312 bp Ori: AND20795.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4154768-4155590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 54768-41 55590 bp Feature: domain Description: Intron_maturas2 Location: 4155659-4155971 bp Feature: domain Description: Intron_maturas2 Location: 41 55659-41 55971 bp Feature: domain Description: HNHc Note: nucleases Location: 4156145-4156286 bp Feature: domain Description: HNHc Note: nucleases Location: 41 561 45-41 56286 bp Feature: gene Location: 4157399-4157713 bp Ori: AND20796.1 Feature: domain Description: DUF3876 Location: 4157453-4157702 bp Feature: domain Description: DUF3876 Location: 41 57453-41 57702 bp Feature: gene Location: 4157740-4158369 bp Ori: AND20797.1 Feature: domain Description: DUF4141 Location: 4157764-4157902 bp Feature: domain Description: DUF41 41 Location: 41 57764-41 57902 bp Feature: gene Location: 4880365-4880760 bp Feature: gene Location: 4880782-4881129 bp Feature: gene Location: 4881510-4882325 bp Ori: AND21357.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4881828-4882164 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4881 828-48821 64 bp Feature: gene Location: 4882842-4884161 bp Feature: gene Location: 4884180-4885202 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4134 (pfam13572), DUF4133 (pfam13571), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Intron_maturas2 (pfam01348), HNHc (smart00507), DUF3876 (pfam12992), DUF4141 (pfam13605), RVT-DGRs