myRT

myRT report for GCA_001640965.1_ASM164096v1

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Seq: CP015176.1 Bacillus thuringiensis serovar alesti strain BGSC 4C1 chromosome, complete genome (5400819 bp)
Overview 1 RT 1: 943310-948534 bp 2 RT 2: 1011863-1018854 bp Neighborhood of RT #1 [943310, 948557] COG1787 RVT-GII GIIM Dcm Cyt_C5_DNA_methylase Neighborhood of RT #2 [1011863, 1018934] InsQ RVT-GII HNHc ETR_like Ntn_PVA Feature: gene Location: 943310-943507 bp Feature: gene Location: 943545-944093 bp Ori: AND06536.1 Feature: domain Description: COG1787 Location: 943656-944076 bp Feature: domain Description: COG1 787 Location: 943656-944076 bp Feature: gene Location: 944406-945155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 944427-944793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 944427-944793 bp Feature: domain Description: GIIM Note: maturase Location: 944874-945084 bp Feature: domain Description: GIIM Note: maturase Location: 944874-945084 bp Feature: gene Location: 946108-947514 bp Ori: AND06537.1 Feature: domain Description: Dcm Location: 946372-947491 bp Feature: domain Description: Dcm Location: 946372-947491 bp Feature: gene Location: 947511-948557 bp Ori: AND06538.1 Feature: domain Description: Cyt_C5_DNA_methylase Location: 947520-948534 bp Feature: domain Description: Cyt_C5_DNA_methylase Location: 947520-948534 bp Feature: gene Location: 1011863-1012167 bp Feature: gene Location: 1012452-1013582 bp Feature: domain Description: InsQ Location: 1012455-1013571 bp Feature: domain Description: InsQ Location: 1 01 2455-1 01 3571 bp Feature: gene Location: 1014336-1016141 bp Ori: AND06599.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1014630-1015326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 4630-1 01 5326 bp Feature: domain Description: HNHc Note: nucleases Location: 1015887-1016025 bp Feature: domain Description: HNHc Note: nucleases Location: 1 01 5887-1 01 6025 bp Feature: gene Location: 1016815-1017798 bp Ori: AND06600.1 Feature: domain Description: ETR_like Location: 1016836-1017772 bp Feature: domain Description: ETR_like Location: 1 01 6836-1 01 7772 bp Feature: gene Location: 1017948-1018934 bp Ori: AND06601.1 Feature: domain Description: Ntn_PVA Location: 1017954-1018854 bp Feature: domain Description: Ntn_PVA Location: 1 01 7954-1 01 8854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG1787 (Endonuclease, HJR/Mrr/RecB family ), RVT-GII, GIIM (pfam08388), Dcm (COG0270), Cyt_C5_DNA_methylase (cl30459), InsQ (COG0675), HNHc (smart00507), ETR_like (cd05282), Ntn_PVA (cd00542)

Seq: CP015177.1 Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB267, complete sequence (267609 bp)
Overview 1 RT 1: 26307-31505 bp 2 RT 2: 53281-61537 bp 3 RT 3: 100016-109786 bp Neighborhood of RT #1 [26307, 31791] HAD_YsbA-like RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #2 [53281, 64767] NlpD Spr HNHc RVT-GII CwlT_like RVT-GII HNHc CwlT_like TrbL Neighborhood of RT #3 [100016, 110163] RVT-GII Intron_maturas2 HNHc RVT-GII GIIM TraG-D_C Ftsk_gamma Ftsk_gamma HTH_XRE Feature: gene Location: 26307-26822 bp Feature: gene Location: 27616-28198 bp Feature: domain Description: HAD_YsbA-like Location: 27622-27814 bp Feature: domain Description: HAD_YsbA-like Location: 2 762 2 -2 7814 bp Feature: gene Location: 28940-30247 bp Ori: AND11150.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29225-29864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 92 2 5-2 9864 bp Feature: domain Description: GIIM Note: maturase Location: 29939-30164 bp Feature: domain Description: GIIM Note: maturase Location: 2 9939-30164 bp Feature: gene Location: 30421-30600 bp Feature: gene Location: 30761-31791 bp Feature: domain Description: DDE_Tnp_1 Location: 31103-31505 bp Feature: domain Description: DDE_Tnp_1 Location: 31103-31505 bp Feature: gene Location: 53281-54357 bp Feature: domain Description: NlpD Location: 53383-53929 bp Feature: domain Description: NlpD Location: 53383-5392 9 bp Feature: domain Description: Spr Location: 53962-54298 bp Feature: domain Description: Spr Location: 53962 -542 98 bp Feature: gene Location: 54450-54785 bp Ori: AND11155.1 Feature: domain Description: HNHc Note: nucleases Location: 54513-54648 bp Feature: domain Description: HNHc Note: nucleases Location: 54513-54648 bp Feature: gene Location: 54986-56245 bp Ori: AND11024.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55244-55949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 552 44-55949 bp Feature: gene Location: 56557-56775 bp Feature: gene Location: 57018-57185 bp Ori: AND11026.1 Feature: domain Description: CwlT_like Location: 57060-57168 bp Feature: domain Description: CwlT_like Location: 57060-57168 bp Feature: gene Location: 57301-59106 bp Ori: AND11027.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57595-58291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57595-582 91 bp Feature: domain Description: HNHc Note: nucleases Location: 58852-58990 bp Feature: domain Description: HNHc Note: nucleases Location: 58852 -58990 bp Feature: gene Location: 59780-60778 bp Ori: AND11028.1 Feature: domain Description: CwlT_like Location: 60632-60755 bp Feature: domain Description: CwlT_like Location: 60632 -60755 bp Feature: gene Location: 60775-64767 bp Ori: AND11029.1 Feature: domain Description: TrbL Location: 61258-61537 bp Feature: domain Description: TrbL Location: 612 58-61537 bp Feature: gene Location: 100016-100402 bp Feature: gene Location: 100420-101898 bp Feature: gene Location: 102523-104340 bp Ori: AND11062.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102793-103615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 793-103615 bp Feature: domain Description: Intron_maturas2 Location: 103696-103990 bp Feature: domain Description: Intron_maturas2 Location: 103696-103990 bp Feature: domain Description: HNHc Note: nucleases Location: 104137-104311 bp Feature: domain Description: HNHc Note: nucleases Location: 104137-104311 bp Feature: gene Location: 105321-107195 bp Ori: AND11063.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105621-106326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10562 1-10632 6 bp Feature: domain Description: GIIM Note: maturase Location: 106455-106608 bp Feature: domain Description: GIIM Note: maturase Location: 106455-106608 bp Feature: gene Location: 107428-109281 bp Feature: domain Description: TraG-D_C Location: 107440-107758 bp Feature: domain Description: TraG-D_C Location: 107440-107758 bp Feature: domain Description: Ftsk_gamma Location: 108163-108343 bp Feature: domain Description: Ftsk_gamma Location: 108163-108343 bp Feature: domain Description: Ftsk_gamma Location: 108475-108613 bp Feature: domain Description: Ftsk_gamma Location: 108475-108613 bp Feature: gene Location: 109603-110163 bp Ori: AND11064.1 Feature: domain Description: HTH_XRE Location: 109615-109786 bp Feature: domain Description: HTH_XRE Location: 109615-109786 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HAD_YsbA-like (cd07523), RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609), NlpD (COG0739), Spr (COG0791), HNHc (smart00507), CwlT_like, TrbL (pfam04610), Intron_maturas2 (pfam01348)
TraG-D_C (pfam12696), Ftsk_gamma (smart00843), HTH_XRE (smart00530)

Seq: CP015180.1 Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB71, complete sequence (71696 bp)
Overview 1 RT 1: 2946-9161 bp Neighborhood of RT #1 [2946, 9250] Lysozyme_like Spr RVT-GII HNHc Lysozyme_like VirB4_CagE Feature: gene Location: 2946-3554 bp Feature: gene Location: 3578-4351 bp Feature: domain Description: Lysozyme_like Location: 3584-3935 bp Feature: domain Description: Lysozyme_like Location: 3 584-3 93 5 bp Feature: domain Description: Spr Location: 3947-4337 bp Feature: domain Description: Spr Location: 3 947-43 3 7 bp Feature: gene Location: 4449-6254 bp Ori: AND11239.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4743-5439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4743 -543 9 bp Feature: domain Description: HNHc Note: nucleases Location: 6000-6138 bp Feature: domain Description: HNHc Note: nucleases Location: 6000-613 8 bp Feature: gene Location: 6928-7314 bp Ori: AND11240.1 Feature: domain Description: Lysozyme_like Location: 7147-7294 bp Feature: domain Description: Lysozyme_like Location: 7147-7294 bp Feature: gene Location: 7316-9250 bp Ori: AND11241.1 Feature: domain Description: VirB4_CagE Location: 7646-9161 bp Feature: domain Description: VirB4_CagE Location: 7646-9161 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lysozyme_like (pfam13702), Spr (COG0791), RVT-GII, HNHc (smart00507), VirB4_CagE (TIGR00929)