myRT

myRT report for GCA_001644685.1_ASM164468v1

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Seq: CP014361.1 Methylomonas sp. DH-1 plasmid, complete sequence (277875 bp)
Overview 1 RT 1: 145013-151311 bp Neighborhood of RT #1 [145013, 151328] COG4584 COG4584 IstB_IS21_ATP IstB_IS21 RVT-GII ParM_like Feature: gene Location: 145013-146530 bp Ori: ANE57987.1 Feature: domain Description: COG4584 Location: 145109-145871 bp Feature: domain Description: COG4584 Location: 1 451 09-1 45871 bp Feature: domain Description: COG4584 Location: 145973-146519 bp Feature: domain Description: COG4584 Location: 1 45973-1 4651 9 bp Feature: gene Location: 146543-147298 bp Ori: ANE57988.1 Feature: domain Description: IstB_IS21_ATP Location: 146615-146699 bp Feature: domain Description: IstB_IS21 _ATP Location: 1 4661 5-1 46699 bp Feature: domain Description: IstB_IS21 Location: 146702-147239 bp Feature: domain Description: IstB_IS21 Location: 1 46702-1 47239 bp Feature: gene Location: 147455-148657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 147863-148553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 47863-1 48553 bp Feature: gene Location: 149203-150174 bp Feature: gene Location: 150360-151328 bp Ori: ANE57990.1 Feature: domain Description: ParM_like Location: 150369-151311 bp Feature: domain Description: ParM_like Location: 1 50369-1 51 31 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4584 (Transposase ), IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), RVT-GII, ParM_like (cd10227)

Seq: CP014360.1 Methylomonas sp. DH-1, complete genome (4849532 bp)
Overview 1 RT 1: 1097025-1100514 bp 2 RT 2: 1328058-1331612 bp 3 RT 3: 2360186-2364855 bp 4 RT 4: 3872389-3875868 bp Neighborhood of RT #1 [1097025, 1100765] CxxCxxCC RVT-GII GIIM Methyltransf_11 Neighborhood of RT #2 [1328058, 1331773] InsE PHA02517 RVT-GII GIIM PHA02517 PPOX_FMN_DR2398 Neighborhood of RT #3 [2360186, 2364863] lnt PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #4 [3872389, 3875879] HicB_lk_antitox RVT-Retrons CSD PIN_VapC4-5_FitB-like Feature: gene Location: 1097025-1097768 bp Ori: ANE54637.1 Feature: domain Description: CxxCxxCC Location: 1097211-1097532 bp Feature: domain Description: CxxCxxCC Location: 10972 11-1097532 bp Feature: gene Location: 1097947-1098204 bp Feature: gene Location: 1098357-1099667 bp Ori: ANE54639.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1098690-1099314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1098690-1099314 bp Feature: domain Description: GIIM Note: maturase Location: 1099359-1099569 bp Feature: domain Description: GIIM Note: maturase Location: 1099359-1099569 bp Feature: gene Location: 1099809-1100027 bp Feature: gene Location: 1100043-1100765 bp Ori: ANE54641.1 Feature: domain Description: Methyltransf_11 Location: 1100223-1100514 bp Feature: domain Description: Methyltransf_11 Location: 11002 2 3-1100514 bp Feature: gene Location: 1328058-1328354 bp Ori: ANE54816.1 Feature: domain Description: InsE Location: 1328064-1328346 bp Feature: domain Description: InsE Location: 132 8064-132 8346 bp Feature: gene Location: 1328351-1328755 bp Feature: domain Description: PHA02517 Location: 1328423-1328753 bp Feature: domain Description: PHA02 517 Location: 132 842 3-132 8753 bp Feature: gene Location: 1329268-1330509 bp Ori: ANE54817.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1329466-1330123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 9466-133012 3 bp Feature: domain Description: GIIM Note: maturase Location: 1330201-1330429 bp Feature: domain Description: GIIM Note: maturase Location: 13302 01-133042 9 bp Feature: gene Location: 1330589-1331074 bp Feature: domain Description: PHA02517 Location: 1330592-1331039 bp Feature: domain Description: PHA02 517 Location: 1330592 -1331039 bp Feature: gene Location: 1331117-1331773 bp Ori: ANE54818.1 Feature: domain Description: PPOX_FMN_DR2398 Location: 1331207-1331612 bp Feature: domain Description: PPOX_FMN_DR2 398 Location: 13312 07-1331612 bp Feature: gene Location: 2360186-2361760 bp Ori: ANE55560.1 Feature: domain Description: lnt Location: 2360216-2361689 bp Feature: domain Description: lnt Location: 2 3602 16-2 361689 bp Feature: gene Location: 2361847-2362332 bp Feature: domain Description: PHA02517 Location: 2361850-2362297 bp Feature: domain Description: PHA02 517 Location: 2 361850-2 362 2 97 bp Feature: gene Location: 2362412-2363653 bp Ori: ANE55561.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2362610-2363267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 362 610-2 3632 67 bp Feature: domain Description: GIIM Note: maturase Location: 2363345-2363573 bp Feature: domain Description: GIIM Note: maturase Location: 2 363345-2 363573 bp Feature: gene Location: 2364166-2364570 bp Feature: domain Description: PHA02517 Location: 2364238-2364568 bp Feature: domain Description: PHA02 517 Location: 2 3642 38-2 364568 bp Feature: gene Location: 2364567-2364863 bp Ori: ANE55562.1 Feature: domain Description: InsE Location: 2364573-2364855 bp Feature: domain Description: InsE Location: 2 364573-2 364855 bp Feature: gene Location: 3872389-3872799 bp Ori: ANE56742.1 Feature: domain Description: HicB_lk_antitox Location: 3872398-3872767 bp Feature: domain Description: HicB_lk_antitox Location: 3872 398-3872 767 bp Feature: gene Location: 3872827-3873105 bp Feature: gene Location: 3873627-3874817 bp Ori: ANE56744.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3873780-3874350 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3873780-3874350 bp Feature: gene Location: 3874819-3875028 bp Ori: ANE56745.1 Feature: domain Description: CSD Location: 3874840-3875020 bp Feature: domain Description: CSD Location: 3874840-387502 0 bp Feature: gene Location: 3875472-3875879 bp Ori: ANE56746.1 Feature: domain Description: PIN_VapC4-5_FitB-like Location: 3875481-3875868 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 3875481-3875868 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CxxCxxCC (pfam03692), RVT-GII, GIIM (pfam08388), Methyltransf_11 (pfam08241), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), PPOX_FMN_DR2398 (TIGR04025), lnt (TIGR00546), HicB_lk_antitox (pfam15919), RVT-Retrons
CSD (pfam00313), PIN_VapC4-5_FitB-like (cd18754)