myRT

myRT report for GCA_001644765.1_ASM164476v1

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Seq: CP015500.1 Klebsiella pneumoniae strain SKGH01 chromosome, complete genome (5490611 bp)
Overview 1 RT 1: 838135-840798 bp 2 RT 2: 1758837-1765100 bp 3 RT 3: 2389472-2394038 bp 4 RT 4: 2909822-2918627 bp Neighborhood of RT #1 [838135, 840798] PRK11558 RVT-GII Neighborhood of RT #2 [1758837, 1765264] SGNH_hydrolase_like_2 RVT-GII PRK10276 Neighborhood of RT #3 [2389472, 2394040] N6_acetyl_AAC6 RVT-GII GIIM Arr-ms PRK15417 Neighborhood of RT #4 [2909822, 2918635] PRK15110 PRK09951 RVT-UG11 umuC PRK10276 RVT-GII PinE Feature: gene Location: 838135-838428 bp Feature: domain Description: PRK11558 Location: 838138-838426 bp Feature: domain Description: PRK1 1 558 Location: 8381 38-838426 bp Feature: gene Location: 838499-838720 bp Feature: gene Location: 838874-840136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 839279-839969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 839279-839969 bp Feature: gene Location: 840169-840360 bp Feature: gene Location: 840526-840798 bp Feature: gene Location: 1758837-1760597 bp Feature: domain Description: SGNH_hydrolase_like_2 Location: 1760175-1760583 bp Feature: domain Description: SGNH_hydrolase_like_2 Location: 1 7601 75-1 760583 bp Feature: gene Location: 1760612-1761355 bp Feature: gene Location: 1763133-1764620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1763538-1764228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 763538-1 764228 bp Feature: gene Location: 1764697-1764936 bp Feature: gene Location: 1764893-1765264 bp Feature: domain Description: PRK10276 Location: 1764938-1765100 bp Feature: domain Description: PRK1 0276 Location: 1 764938-1 7651 00 bp Feature: gene Location: 2389472-2389705 bp Feature: gene Location: 2389793-2390347 bp Feature: domain Description: N6_acetyl_AAC6 Location: 2389796-2390345 bp Feature: domain Description: N6_acetyl_AAC6 Location: 2389796-2390345 bp Feature: gene Location: 2391068-2392321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2391260-2391884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2391 260-2391 884 bp Feature: domain Description: GIIM Note: maturase Location: 2391923-2392142 bp Feature: domain Description: GIIM Note: maturase Location: 2391 923-23921 42 bp Feature: gene Location: 2392402-2392854 bp Feature: domain Description: Arr-ms Location: 2392462-2392768 bp Feature: domain Description: Arr-ms Location: 2392462-2392768 bp Feature: gene Location: 2393027-2394040 bp Feature: domain Description: PRK15417 Location: 2393030-2394038 bp Feature: domain Description: PRK1 541 7 Location: 2393030-2394038 bp Feature: gene Location: 2909822-2910787 bp Feature: domain Description: PRK15110 Location: 2909825-2910785 bp Feature: domain Description: PRK1 51 1 0 Location: 2909825-291 0785 bp Feature: gene Location: 2910992-2911660 bp Feature: domain Description: PRK09951 Location: 2910995-2911658 bp Feature: domain Description: PRK09951 Location: 291 0995-291 1 658 bp Feature: gene Location: 2911861-2912769 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2912134-2912590 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 291 21 34-291 2590 bp Feature: gene Location: 2913442-2914707 bp Feature: domain Description: umuC Location: 2913445-2914705 bp Feature: domain Description: umuC Location: 291 3445-291 4705 bp Feature: gene Location: 2914709-2915128 bp Feature: domain Description: PRK10276 Location: 2914712-2915123 bp Feature: domain Description: PRK1 0276 Location: 291 471 2-291 51 23 bp Feature: gene Location: 2915208-2916692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2915610-2916300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 291 561 0-291 6300 bp Feature: gene Location: 2916701-2916868 bp Feature: gene Location: 2918087-2918635 bp Feature: domain Description: PinE Location: 2918090-2918627 bp Feature: domain Description: PinE Location: 291 8090-291 8627 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11558 (putative ssRNA endonuclease; Provisional), RVT-GII, SGNH_hydrolase_like_2 (cd01834), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), N6_acetyl_AAC6 (TIGR04431), GIIM (pfam08388), Arr-ms (pfam12120), PRK15417 (integron integrase), PRK15110 (peptide ABC transporter permease SapB), PRK09951 (hypothetical protein; Provisional)
RVT-UG11, umuC (PRK03609), PinE (COG1961)

Seq: CP015501.1 Klebsiella pneumoniae strain SKGH01 plasmid unnamed 1, complete sequence (281190 bp)
Overview 1 RT 1: 9770-13566 bp 2 RT 2: 68589-72101 bp 3 RT 3: 110870-114271 bp 4 RT 4: 157974-161833 bp 5 RT 5: 261406-264759 bp Neighborhood of RT #1 [9770, 13574] RVT-GII PRK10276 umuC Neighborhood of RT #2 [68589, 72709] RVT-GII HTH_28 rve Neighborhood of RT #3 [110870, 114271] lacA PHA02517 RVT-GII GIIM Neighborhood of RT #4 [157974, 161833] HHA RVT-GII INT_Cre_C Neighborhood of RT #5 [261406, 264776] IS5 PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 9770-9916 bp Feature: gene Location: 9983-10318 bp Feature: gene Location: 10393-11835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10720-11410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1072 0-11410 bp Feature: gene Location: 11881-12303 bp Feature: domain Description: PRK10276 Location: 11887-12289 bp Feature: domain Description: PRK102 76 Location: 11887-12 2 89 bp Feature: gene Location: 12303-13574 bp Feature: domain Description: umuC Location: 12306-13566 bp Feature: domain Description: umuC Location: 12 306-13566 bp Feature: gene Location: 68589-68867 bp Feature: gene Location: 68876-69190 bp Feature: gene Location: 69303-70790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69708-70398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69708-70398 bp Feature: gene Location: 70815-71186 bp Feature: gene Location: 71306-72709 bp Feature: domain Description: HTH_28 Location: 71354-71495 bp Feature: domain Description: HTH_2 8 Location: 71354-71495 bp Feature: domain Description: rve Location: 71735-72101 bp Feature: domain Description: rve Location: 71735-72 101 bp Feature: gene Location: 110870-111031 bp Feature: domain Description: lacA Location: 110873-111011 bp Feature: domain Description: lacA Location: 110873-111011 bp Feature: gene Location: 111265-111690 bp Feature: domain Description: PHA02517 Location: 111289-111625 bp Feature: domain Description: PHA02 517 Location: 1112 89-11162 5 bp Feature: gene Location: 112282-113805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112555-113287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112 555-1132 87 bp Feature: domain Description: GIIM Note: maturase Location: 113362-113560 bp Feature: domain Description: GIIM Note: maturase Location: 113362 -113560 bp Feature: gene Location: 113892-114098 bp Feature: gene Location: 114104-114271 bp Feature: gene Location: 157974-158225 bp Feature: domain Description: HHA Location: 158022-158205 bp Feature: domain Description: HHA Location: 15802 2 -1582 05 bp Feature: gene Location: 158493-158744 bp Feature: gene Location: 158819-160228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 159146-159836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 159146-159836 bp Feature: gene Location: 160314-161450 bp Feature: domain Description: INT_Cre_C Location: 160737-161391 bp Feature: domain Description: INT_Cre_C Location: 160737-161391 bp Feature: gene Location: 161516-161833 bp Feature: gene Location: 261406-261726 bp Feature: domain Description: IS5 Location: 261421-261721 bp Feature: domain Description: IS5 Location: 2 6142 1-2 6172 1 bp Feature: gene Location: 261745-262164 bp Feature: domain Description: PHA02517 Location: 261748-262159 bp Feature: domain Description: PHA02 517 Location: 2 61748-2 62 159 bp Feature: gene Location: 262293-263813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 262566-263295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 62 566-2 632 95 bp Feature: domain Description: GIIM Note: maturase Location: 263367-263568 bp Feature: domain Description: GIIM Note: maturase Location: 2 63367-2 63568 bp Feature: gene Location: 264228-264383 bp Feature: gene Location: 264456-264776 bp Feature: domain Description: PHA02517 Location: 264489-264759 bp Feature: domain Description: PHA02 517 Location: 2 64489-2 64759 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), HTH_28 (pfam13518), rve (pfam00665), lacA (TIGR01118), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388), HHA (pfam05321), INT_Cre_C (cd00799)
IS5 (COG3039)

Seq: CP015502.1 Klebsiella pneumoniae strain SKGH01 plasmid unnamed 2, complete sequence (140874 bp)
Overview 1 RT 1: 91820-96824 bp Neighborhood of RT #1 [91820, 96826] Rve RVT-GII GIIM DHFR PRK15417 Feature: gene Location: 91820-92614 bp Feature: domain Description: Rve Location: 91871-92489 bp Feature: domain Description: Rve Location: 91871-92489 bp Feature: gene Location: 92613-93047 bp Feature: gene Location: 93760-95115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94054-94678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94054-94678 bp Feature: domain Description: GIIM Note: maturase Location: 94717-94936 bp Feature: domain Description: GIIM Note: maturase Location: 94717-9493 6 bp Feature: gene Location: 95184-95666 bp Feature: domain Description: DHFR Location: 95202-95658 bp Feature: domain Description: DHFR Location: 95202-95658 bp Feature: gene Location: 95813-96826 bp Feature: domain Description: PRK15417 Location: 95816-96824 bp Feature: domain Description: PRK15417 Location: 95816-96824 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), RVT-GII, GIIM (pfam08388), DHFR (cl17279), PRK15417 (integron integrase)

Seq: CP015503.1 Klebsiella pneumoniae strain SKGH01 plasmid unnamed 3, complete sequence (84941 bp)
Overview 1 RT 1: 56774-61369 bp 2 RT 2: 75343-79255 bp Neighborhood of RT #1 [56774, 61395] N6_acetyl_AAC6 RVT-GII GIIM PRK13746 DHFR_1 Neighborhood of RT #2 [75343, 79255] Antirestrict DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 56774-57007 bp Feature: gene Location: 57095-57649 bp Feature: domain Description: N6_acetyl_AAC6 Location: 57098-57647 bp Feature: domain Description: N6_acetyl_AAC6 Location: 57098-5764 7 bp Feature: gene Location: 58268-59623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58562-59186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58562-59186 bp Feature: domain Description: GIIM Note: maturase Location: 59225-59444 bp Feature: domain Description: GIIM Note: maturase Location: 59225-594 4 4 bp Feature: gene Location: 59699-60490 bp Feature: domain Description: PRK13746 Location: 59702-60482 bp Feature: domain Description: PRK1374 6 Location: 59702-604 82 bp Feature: gene Location: 60898-61395 bp Feature: domain Description: DHFR_1 Location: 60922-61369 bp Feature: domain Description: DHFR_1 Location: 60922-61369 bp Feature: gene Location: 75343-75768 bp Feature: domain Description: Antirestrict Location: 75478-75766 bp Feature: domain Description: Antirestrict Location: 754 78-75766 bp Feature: gene Location: 75815-76237 bp Feature: domain Description: DUF1380 Location: 75818-76115 bp Feature: domain Description: DUF1380 Location: 75818-76115 bp Feature: gene Location: 76739-78406 bp Feature: domain Description: RVT_N Location: 76787-77024 bp Feature: domain Description: RVT_N Location: 76787-77024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77075-77717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77075-77717 bp Feature: domain Description: GIIM Note: maturase Location: 77768-78002 bp Feature: domain Description: GIIM Note: maturase Location: 77768-78002 bp Feature: domain Description: HNHc Note: nucleases Location: 78212-78371 bp Feature: domain Description: HNHc Note: nucleases Location: 78212-78371 bp Feature: gene Location: 78686-78868 bp Feature: gene Location: 78980-79255 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_acetyl_AAC6 (TIGR04431), RVT-GII, GIIM (pfam08388), PRK13746 (aminoglycoside resistance protein; Provisional), DHFR_1 (pfam00186), Antirestrict (pfam03230), DUF1380 (pfam07128), RVT_N (pfam13655), HNHc (smart00507)