myRT

myRT report for GCA_001646605.1_ASM164660v1

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Seq: CP014705.1 Clostridium butyricum strain TOA chromosome 2, complete sequence (795002 bp)
Overview 1 RT 1: 396670-405278 bp Neighborhood of RT #1 [396670, 405289] RVT-Retrons ADA MarR Feature: gene Location: 396670-399606 bp Feature: gene Location: 399606-401414 bp Feature: gene Location: 401411-402919 bp Ori: ANF16034.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 402047-402695 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 402047-402695 bp Feature: gene Location: 403507-404499 bp Ori: ANF16035.1 Feature: domain Description: ADA Location: 403522-404491 bp Feature: domain Description: ADA Location: 403522-404491 bp Feature: gene Location: 404858-405289 bp Ori: ANF16036.1 Feature: domain Description: MarR Location: 404903-405278 bp Feature: domain Description: MarR Location: 404903-405278 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, ADA (cd01320), MarR (pfam01047)

Seq: CP014704.1 Clostridium butyricum strain TOA chromosome 1, complete sequence (3794139 bp)
Overview 1 RT 1: 2034020-2041169 bp 2 RT 2: 3135391-3141891 bp 3 RT 3: 3340956-3346273 bp Neighborhood of RT #1 [2034020, 2041171] PadR RVT-UG24 YdiU Neighborhood of RT #2 [3135391, 3141902] GT4_WlbH-like GalU RVT-GII HNHc GalU BaeS Neighborhood of RT #3 [3340956, 3346398] YveK GalU RVT-GII HNHc GalU DUF820 Feature: gene Location: 2034020-2034547 bp Ori: ANF14187.1 Feature: domain Description: PadR Location: 2034032-2034404 bp Feature: domain Description: PadR Location: 2 034032 -2 034404 bp Feature: gene Location: 2034642-2035007 bp Feature: gene Location: 2035264-2038524 bp Ori: ANF14188.1 Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 2035771-2036251 bp Feature: RT Description: RVT-UG2 4 Note: UG2 4 RT Location: 2 035771-2 0362 51 bp Feature: gene Location: 2038514-2039086 bp Feature: gene Location: 2039696-2041171 bp Ori: ANF14190.1 Feature: domain Description: YdiU Location: 2039726-2041169 bp Feature: domain Description: YdiU Location: 2 03972 6-2 041169 bp Feature: gene Location: 3135391-3136473 bp Ori: ANF15148.1 Feature: domain Description: GT4_WlbH-like Location: 3135424-3136459 bp Feature: domain Description: GT4_WlbH-like Location: 313542 4-3136459 bp Feature: gene Location: 3136849-3137532 bp Feature: domain Description: GalU Location: 3136855-3137497 bp Feature: domain Description: GalU Location: 3136855-3137497 bp Feature: gene Location: 3137650-3139461 bp Ori: ANF15149.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3137968-3138664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3137968-3138664 bp Feature: domain Description: HNHc Note: nucleases Location: 3139213-3139351 bp Feature: domain Description: HNHc Note: nucleases Location: 31392 13-3139351 bp Feature: gene Location: 3140181-3140399 bp Ori: ANF15150.1 Feature: domain Description: GalU Location: 3140184-3140385 bp Feature: domain Description: GalU Location: 3140184-3140385 bp Feature: gene Location: 3140652-3141902 bp Ori: ANF15151.1 Feature: domain Description: BaeS Location: 3141012-3141891 bp Feature: domain Description: BaeS Location: 3141012 -3141891 bp Feature: gene Location: 3340956-3341642 bp Ori: ANF15284.1 Feature: domain Description: YveK Location: 3340965-3341625 bp Feature: domain Description: YveK Location: 3340965-334162 5 bp Feature: gene Location: 3342098-3342775 bp Feature: domain Description: GalU Location: 3342104-3342752 bp Feature: domain Description: GalU Location: 3342 104-3342 752 bp Feature: gene Location: 3342893-3344704 bp Ori: ANF15285.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3343211-3343907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33432 11-3343907 bp Feature: domain Description: HNHc Note: nucleases Location: 3344456-3344594 bp Feature: domain Description: HNHc Note: nucleases Location: 3344456-3344594 bp Feature: gene Location: 3345424-3345651 bp Ori: ANF15286.1 Feature: domain Description: GalU Location: 3345436-3345637 bp Feature: domain Description: GalU Location: 3345436-3345637 bp Feature: gene Location: 3345832-3346398 bp Ori: ANF15287.1 Feature: domain Description: DUF820 Location: 3345865-3346273 bp Feature: domain Description: DUF82 0 Location: 3345865-33462 73 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PadR (pfam03551), RVT-UG24, YdiU (COG0397), GT4_WlbH-like (cd03798), GalU (COG1210), RVT-GII, HNHc (smart00507), BaeS (COG0642), YveK (COG3944), DUF820