myRT

myRT report for GCA_001651805.1_ASM165180v1

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Seq: CP015839.1 Marinobacterium aestuarii strain ST58-10, complete genome (5191608 bp)
Overview 1 RT 1: 1246545-1251154 bp 2 RT 2: 1566897-1572393 bp 3 RT 3: 3645817-3650279 bp 4 RT 4: 5149416-5155472 bp Neighborhood of RT #1 [1246545, 1251168] DUF5372 RVT-GII GIIM PRK13011 PRK14188 Neighborhood of RT #2 [1566897, 1572398] AcoR PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #3 [3645817, 3650284] COG3224 PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #4 [5149416, 5155510] COG4584 IstB_IS21_ATP IstB_IS21 RVT-GII GIIM TerB Agmatinase_like_1 Feature: gene Location: 1246545-1246877 bp Feature: gene Location: 1246926-1247198 bp Ori: ANG61987.1 Feature: domain Description: DUF5372 Location: 1246944-1247175 bp Feature: domain Description: DUF5372 Location: 1 246944-1 2471 75 bp Feature: gene Location: 1247228-1248268 bp Ori: ANG61988.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1247234-1247819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 247234-1 24781 9 bp Feature: domain Description: GIIM Note: maturase Location: 1247876-1248077 bp Feature: domain Description: GIIM Note: maturase Location: 1 247876-1 248077 bp Feature: gene Location: 1249339-1250199 bp Ori: ANG61989.1 Feature: domain Description: PRK13011 Location: 1249354-1250197 bp Feature: domain Description: PRK1 301 1 Location: 1 249354-1 2501 97 bp Feature: gene Location: 1250266-1251168 bp Ori: ANG61990.1 Feature: domain Description: PRK14188 Location: 1250311-1251154 bp Feature: domain Description: PRK1 41 88 Location: 1 25031 1 -1 251 1 54 bp Feature: gene Location: 1566897-1568885 bp Ori: ANG62263.1 Feature: domain Description: AcoR Location: 1566927-1568877 bp Feature: domain Description: AcoR Location: 1 566927-1 568877 bp Feature: gene Location: 1568963-1569430 bp Feature: domain Description: PHA02517 Location: 1568969-1569413 bp Feature: domain Description: PHA0251 7 Location: 1 568969-1 56941 3 bp Feature: gene Location: 1569511-1571034 bp Ori: ANG62264.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1569784-1570516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 569784-1 57051 6 bp Feature: domain Description: GIIM Note: maturase Location: 1570588-1570816 bp Feature: domain Description: GIIM Note: maturase Location: 1 570588-1 57081 6 bp Feature: gene Location: 1571629-1572051 bp Ori: ANG62265.1 Feature: domain Description: PHA02517 Location: 1571644-1571986 bp Feature: domain Description: PHA0251 7 Location: 1 571 644-1 571 986 bp Feature: gene Location: 1572099-1572398 bp Ori: ANG62266.1 Feature: domain Description: InsE Location: 1572114-1572393 bp Feature: domain Description: InsE Location: 1 5721 1 4-1 572393 bp Feature: gene Location: 3645817-3646428 bp Ori: ANG63823.1 Feature: domain Description: COG3224 Location: 3645865-3646423 bp Feature: domain Description: COG3224 Location: 3645865-3646423 bp Feature: gene Location: 3646849-3647316 bp Feature: domain Description: PHA02517 Location: 3646855-3647299 bp Feature: domain Description: PHA0251 7 Location: 3646855-3647299 bp Feature: gene Location: 3647397-3648920 bp Ori: ANG63824.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3647670-3648402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3647670-3648402 bp Feature: domain Description: GIIM Note: maturase Location: 3648474-3648702 bp Feature: domain Description: GIIM Note: maturase Location: 3648474-3648702 bp Feature: gene Location: 3649515-3649937 bp Ori: ANG63825.1 Feature: domain Description: PHA02517 Location: 3649530-3649872 bp Feature: domain Description: PHA0251 7 Location: 3649530-3649872 bp Feature: gene Location: 3649985-3650284 bp Ori: ANG63826.1 Feature: domain Description: InsE Location: 3650000-3650279 bp Feature: domain Description: InsE Location: 3650000-3650279 bp Feature: gene Location: 5149416-5150957 bp Ori: ANG64998.1 Feature: domain Description: COG4584 Location: 5149536-5150322 bp Feature: domain Description: COG4584 Location: 51 49536-51 50322 bp Feature: gene Location: 5150984-5151739 bp Ori: ANG64999.1 Feature: domain Description: IstB_IS21_ATP Location: 5151056-5151140 bp Feature: domain Description: IstB_IS21 _ATP Location: 51 51 056-51 51 1 40 bp Feature: domain Description: IstB_IS21 Location: 5151143-5151671 bp Feature: domain Description: IstB_IS21 Location: 51 51 1 43-51 51 671 bp Feature: gene Location: 5151768-5153033 bp Ori: ANG65000.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5152107-5152725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 521 07-51 52725 bp Feature: domain Description: GIIM Note: maturase Location: 5152782-5152977 bp Feature: domain Description: GIIM Note: maturase Location: 51 52782-51 52977 bp Feature: gene Location: 5153733-5154191 bp Ori: ANG65001.1 Feature: domain Description: TerB Location: 5153808-5154168 bp Feature: domain Description: TerB Location: 51 53808-51 541 68 bp Feature: gene Location: 5154545-5155510 bp Ori: ANG65002.1 Feature: domain Description: Agmatinase_like_1 Location: 5154656-5155472 bp Feature: domain Description: Agmatinase_like_1 Location: 51 54656-51 55472 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5372 (pfam17342), RVT-GII, GIIM (pfam08388), PRK13011 (formyltetrahydrofolate deformylase; Reviewed), PRK14188 (bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD), AcoR (COG3284), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), COG3224 (Antibiotic biosynthesis monooxygenase (ABM) superfamily enzyme ), COG4584 (Transposase )
IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), TerB (pfam05099), Agmatinase_like_1 (cd11589)