myRT

myRT report for GCA_001652645.1_ASM165264v1

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Seq: CP015342.1 Legionella pneumophila strain D-7632, complete genome (3435648 bp)
Overview 1 RT 1: 2310159-2316911 bp 2 RT 2: 2942939-2948048 bp Neighborhood of RT #1 [2310159, 2316911] NTP-PPase_MazG_Cterm Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 RVT_N RVT-GII GIIM Tra_M Neighborhood of RT #2 [2942939, 2948401] PAS_4 LuxR_C_like PHA02517 RVT-GII GIIM InsE AbiJ_NTD4 Feature: gene Location: 2310159-2310536 bp Ori: ANH13416.1 Feature: domain Description: NTP-PPase_MazG_Cterm Location: 2310186-2310522 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 231 01 86-231 0522 bp Feature: gene Location: 2310842-2312293 bp Ori: ANH13417.1 Feature: domain Description: Tnp_DNA_bind Location: 2310881-2311049 bp Feature: domain Description: Tnp_DNA_bind Location: 231 0881 -231 1 049 bp Feature: domain Description: DDE_Tnp_1 Location: 2311706-2312000 bp Feature: domain Description: DDE_Tnp_1 Location: 231 1 706-231 2000 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 2312006-2312285 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 231 2006-231 2285 bp Feature: gene Location: 2312364-2313884 bp Ori: ANH13418.1 Feature: domain Description: RVT_N Location: 2312421-2312664 bp Feature: domain Description: RVT_N Location: 231 2421 -231 2664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2312709-2313333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231 2709-231 3333 bp Feature: domain Description: GIIM Note: maturase Location: 2313384-2313618 bp Feature: domain Description: GIIM Note: maturase Location: 231 3384-231 361 8 bp Feature: gene Location: 2314732-2315106 bp Ori: ANH13419.1 Feature: domain Description: Tra_M Location: 2314780-2314975 bp Feature: domain Description: Tra_M Location: 231 4780-231 4975 bp Feature: gene Location: 2315304-2316911 bp Feature: gene Location: 2942939-2943622 bp Ori: ANH13920.1 Feature: domain Description: PAS_4 Location: 2942996-2943281 bp Feature: domain Description: PAS_4 Location: 2942996-2943281 bp Feature: domain Description: LuxR_C_like Location: 2943401-2943557 bp Feature: domain Description: LuxR_C_like Location: 2943401 -2943557 bp Feature: gene Location: 2944015-2944842 bp Ori: ANH13921.1 Feature: domain Description: PHA02517 Location: 2944030-2944816 bp Feature: domain Description: PHA0251 7 Location: 2944030-294481 6 bp Feature: gene Location: 2944990-2946234 bp Ori: ANH13922.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2945194-2945851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29451 94-2945851 bp Feature: domain Description: GIIM Note: maturase Location: 2945932-2946148 bp Feature: domain Description: GIIM Note: maturase Location: 2945932-29461 48 bp Feature: gene Location: 2946765-2947058 bp Ori: ANH13923.1 Feature: domain Description: InsE Location: 2946777-2947038 bp Feature: domain Description: InsE Location: 2946777-2947038 bp Feature: gene Location: 2947592-2948401 bp Ori: ANH13924.1 Feature: domain Description: AbiJ_NTD4 Location: 2947595-2948048 bp Feature: domain Description: AbiJ_NTD4 Location: 2947595-2948048 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP-PPase_MazG_Cterm (cd11529), Tnp_DNA_bind (pfam14706), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Tra_M (pfam05261), PAS_4 (pfam08448), LuxR_C_like (cd06170)
PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), AbiJ_NTD4 (pfam18863)