myRT

myRT report for GCA_001652665.1_ASM165266v1

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Seq: CP015343.1 Legionella pneumophila strain D-7631, complete genome (3436178 bp)
Overview 1 RT 1: 2310691-2317443 bp 2 RT 2: 2943469-2948578 bp Neighborhood of RT #1 [2310691, 2317443] NTP-PPase_MazG_Cterm Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 RVT_N RVT-GII GIIM Tra_M Neighborhood of RT #2 [2943469, 2948931] PAS_4 LuxR_C_like PHA02517 RVT-GII GIIM InsE AbiJ_NTD4 Feature: gene Location: 2310691-2311068 bp Ori: ANH16381.1 Feature: domain Description: NTP-PPase_MazG_Cterm Location: 2310718-2311054 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 231 071 8-231 1 054 bp Feature: gene Location: 2311374-2312825 bp Ori: ANH16382.1 Feature: domain Description: Tnp_DNA_bind Location: 2311413-2311581 bp Feature: domain Description: Tnp_DNA_bind Location: 231 1 41 3-231 1 581 bp Feature: domain Description: DDE_Tnp_1 Location: 2312238-2312532 bp Feature: domain Description: DDE_Tnp_1 Location: 231 2238-231 2532 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 2312538-2312817 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 231 2538-231 281 7 bp Feature: gene Location: 2312896-2314416 bp Ori: ANH16383.1 Feature: domain Description: RVT_N Location: 2312953-2313196 bp Feature: domain Description: RVT_N Location: 231 2953-231 31 96 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2313241-2313865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231 3241 -231 3865 bp Feature: domain Description: GIIM Note: maturase Location: 2313916-2314150 bp Feature: domain Description: GIIM Note: maturase Location: 231 391 6-231 41 50 bp Feature: gene Location: 2315264-2315638 bp Ori: ANH16384.1 Feature: domain Description: Tra_M Location: 2315312-2315507 bp Feature: domain Description: Tra_M Location: 231 531 2-231 5507 bp Feature: gene Location: 2315836-2317443 bp Feature: gene Location: 2943469-2944152 bp Ori: ANH16881.1 Feature: domain Description: PAS_4 Location: 2943526-2943811 bp Feature: domain Description: PAS_4 Location: 2943526-294381 1 bp Feature: domain Description: LuxR_C_like Location: 2943931-2944087 bp Feature: domain Description: LuxR_C_like Location: 2943931 -2944087 bp Feature: gene Location: 2944545-2945372 bp Ori: ANH16882.1 Feature: domain Description: PHA02517 Location: 2944560-2945346 bp Feature: domain Description: PHA0251 7 Location: 2944560-2945346 bp Feature: gene Location: 2945520-2946764 bp Ori: ANH16883.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2945724-2946381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2945724-2946381 bp Feature: domain Description: GIIM Note: maturase Location: 2946462-2946678 bp Feature: domain Description: GIIM Note: maturase Location: 2946462-2946678 bp Feature: gene Location: 2947295-2947588 bp Ori: ANH16884.1 Feature: domain Description: InsE Location: 2947307-2947568 bp Feature: domain Description: InsE Location: 2947307-2947568 bp Feature: gene Location: 2948122-2948931 bp Ori: ANH16885.1 Feature: domain Description: AbiJ_NTD4 Location: 2948125-2948578 bp Feature: domain Description: AbiJ_NTD4 Location: 29481 25-2948578 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP-PPase_MazG_Cterm (cd11529), Tnp_DNA_bind (pfam14706), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Tra_M (pfam05261), PAS_4 (pfam08448), LuxR_C_like (cd06170)
PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), AbiJ_NTD4 (pfam18863)